Literature DB >> 21587788

(2-Chloro-8-meth-oxy-quinolin-3-yl)methanol monohydrate.

S Mohana Roopan, F Nawaz Khan, A Sudheer Kumar, Venkatesha R Hathwar, Mehmet Akkurt.   

Abstract

In the title compound, C(11)H(10)ClNO(2)·H(2)O, the organic mol-ecule is roughly planar (r.m.s. deviation = 0.074 Å). In the crystal structure, molecues are linked by O-H⋯O and O-H⋯N hydrogen bonds and weak C-H⋯π and π-π inter-actions [centroid-centroid distance = 3.578 (3) Å] consolidate the packing. A short Cl⋯O contact [3.147 (3) Å] is also observed.

Entities:  

Year:  2010        PMID: 21587788      PMCID: PMC3006799          DOI: 10.1107/S1600536810020489

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For further information on the starting material, see: Subashini et al. (2009 ▶). For general background to the title compound, see: Roopan et al. (2009 ▶). For related structures, see: Khan et al. (2010a ▶,b ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C11H10ClNO2·H2O M = 241.67 Monoclinic, a = 9.161 (5) Å b = 14.246 (5) Å c = 9.464 (5) Å β = 116.819 (5)° V = 1102.3 (9) Å3 Z = 4 Mo Kα radiation μ = 0.34 mm−1 T = 290 K 0.31 × 0.21 × 0.10 mm

Data collection

Oxford Xcalibur Eos (Nova) CCD detector diffractometer Absorption correction: multi-scan (CrysAlis PRO RED; Oxford Diffraction, 2009 ▶) T min = 0.903, T max = 0.967 8360 measured reflections 2044 independent reflections 1212 reflections with I > 2σ(I) R int = 0.100

Refinement

R[F 2 > 2σ(F 2)] = 0.054 wR(F 2) = 0.134 S = 0.90 2044 reflections 153 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.40 e Å−3 Δρmin = −0.26 e Å−3 Data collection: CrysAlis PRO CCD (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis PRO CCD; data reduction: CrysAlis PRO RED (Oxford Diffraction, 2009 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810020489/hb5469sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810020489/hb5469Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H10ClNO2·H2OF(000) = 504
Mr = 241.67Dx = 1.456 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 1021 reflections
a = 9.161 (5) Åθ = 1.9–20.2°
b = 14.246 (5) ŵ = 0.34 mm1
c = 9.464 (5) ÅT = 290 K
β = 116.819 (5)°Slab, colourless
V = 1102.3 (9) Å30.31 × 0.21 × 0.10 mm
Z = 4
Oxford Xcalibur Eos (Nova) CCD detector diffractometer2044 independent reflections
Radiation source: Enhance (Mo) X-ray Source1212 reflections with I > 2σ(I)
graphiteRint = 0.100
ω scansθmax = 25.5°, θmin = 2.9°
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009)h = −11→11
Tmin = 0.903, Tmax = 0.967k = −17→17
8360 measured reflectionsl = −11→11
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.054Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.134H atoms treated by a mixture of independent and constrained refinement
S = 0.90w = 1/[σ2(Fo2) + (0.0692P)2] where P = (Fo2 + 2Fc2)/3
2044 reflections(Δ/σ)max < 0.001
153 parametersΔρmax = 0.40 e Å3
0 restraintsΔρmin = −0.26 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl1−0.12994 (10)0.21700 (5)−0.05478 (9)0.0525 (3)
O10.0858 (3)0.2656 (2)−0.3822 (3)0.0713 (10)
O20.1487 (3)0.46372 (14)0.3536 (2)0.0515 (8)
N10.0521 (3)0.35801 (15)0.0948 (3)0.0371 (8)
C10.0114 (4)0.30580 (19)−0.0297 (3)0.0399 (10)
C20.0664 (4)0.3140 (2)−0.1453 (3)0.0435 (10)
C30.1715 (4)0.3870 (2)−0.1243 (3)0.0493 (11)
C40.3261 (4)0.5254 (2)0.0313 (4)0.0558 (12)
C50.3720 (4)0.5792 (2)0.1620 (5)0.0603 (14)
C60.3158 (4)0.5601 (2)0.2743 (4)0.0545 (12)
C70.2105 (4)0.4875 (2)0.2525 (3)0.0436 (10)
C80.1595 (3)0.43029 (18)0.1160 (3)0.0379 (9)
C90.2198 (4)0.4484 (2)0.0056 (3)0.0444 (11)
C100.0147 (4)0.2459 (3)−0.2813 (4)0.0573 (11)
C110.2035 (5)0.5135 (3)0.4973 (4)0.0678 (16)
O30.8868 (3)0.3074 (2)0.2937 (3)0.0716 (10)
H1O0.181200.24780−0.340700.1070*
H30.211800.39630−0.197500.0590*
H40.364700.53900−0.042000.0670*
H50.441900.629700.177600.0730*
H60.350700.597200.364600.0660*
H10A0.045100.18290−0.239500.0690*
H10B−0.103400.24780−0.342100.0690*
H11A0.320500.509000.554600.1020*
H11B0.155200.487000.559600.1020*
H11C0.172300.578200.475500.1020*
H1W0.943 (5)0.331 (3)0.252 (5)0.1080*
H2W0.949 (6)0.301 (3)0.389 (5)0.1080*
U11U22U33U12U13U23
Cl10.0537 (5)0.0487 (5)0.0489 (5)−0.0099 (4)0.0176 (4)−0.0054 (4)
O10.0644 (17)0.112 (2)0.0369 (13)0.0262 (15)0.0223 (13)0.0030 (12)
O20.0555 (15)0.0550 (14)0.0428 (12)−0.0026 (11)0.0212 (11)−0.0056 (10)
N10.0369 (14)0.0372 (14)0.0321 (13)0.0029 (11)0.0112 (11)0.0046 (11)
C10.0379 (17)0.0400 (17)0.0342 (17)0.0072 (14)0.0096 (14)0.0066 (13)
C20.0369 (17)0.054 (2)0.0324 (17)0.0087 (15)0.0094 (14)0.0063 (13)
C30.047 (2)0.067 (2)0.0379 (18)0.0167 (18)0.0228 (16)0.0161 (16)
C40.042 (2)0.056 (2)0.072 (2)0.0051 (17)0.0280 (18)0.0169 (19)
C50.043 (2)0.040 (2)0.090 (3)−0.0063 (16)0.023 (2)0.0051 (19)
C60.047 (2)0.044 (2)0.061 (2)−0.0025 (16)0.0141 (18)−0.0045 (16)
C70.0358 (17)0.0434 (18)0.0448 (19)0.0081 (15)0.0122 (15)0.0033 (14)
C80.0317 (16)0.0343 (16)0.0396 (16)0.0055 (14)0.0089 (14)0.0054 (13)
C90.0380 (18)0.0480 (19)0.0458 (19)0.0053 (15)0.0176 (16)0.0110 (15)
C100.056 (2)0.076 (2)0.0358 (19)0.0121 (18)0.0170 (17)−0.0025 (16)
C110.071 (3)0.078 (3)0.046 (2)0.000 (2)0.019 (2)−0.0121 (17)
O30.0575 (17)0.108 (2)0.0480 (15)−0.0196 (15)0.0226 (13)0.0007 (15)
Cl1—C11.748 (4)C4—C91.413 (5)
O1—C101.406 (5)C5—C61.401 (6)
O2—C71.356 (4)C6—C71.365 (5)
O2—C111.410 (4)C7—C81.417 (4)
O1—H1O0.8200C8—C91.409 (4)
O3—H1W0.85 (5)C3—H30.9300
O3—H2W0.83 (4)C4—H40.9300
N1—C11.298 (4)C5—H50.9300
N1—C81.375 (4)C6—H60.9300
C1—C21.401 (5)C10—H10B0.9700
C2—C31.369 (5)C10—H10A0.9700
C2—C101.507 (5)C11—H11C0.9600
C3—C91.408 (4)C11—H11A0.9600
C4—C51.351 (5)C11—H11B0.9600
Cl1···O2i3.147 (3)
C7—O2—C11118.3 (3)C3—C9—C8117.4 (3)
C10—O1—H1O109.00O1—C10—C2112.8 (3)
H1W—O3—H2W107 (5)C2—C3—H3119.00
C1—N1—C8117.1 (3)C9—C3—H3119.00
Cl1—C1—N1115.5 (3)C5—C4—H4120.00
Cl1—C1—C2117.4 (2)C9—C4—H4120.00
N1—C1—C2127.2 (3)C6—C5—H5120.00
C1—C2—C10121.9 (3)C4—C5—H5119.00
C1—C2—C3115.3 (3)C7—C6—H6120.00
C3—C2—C10122.8 (3)C5—C6—H6120.00
C2—C3—C9121.5 (3)O1—C10—H10A109.00
C5—C4—C9120.2 (3)C2—C10—H10A109.00
C4—C5—C6121.0 (3)C2—C10—H10B109.00
C5—C6—C7120.6 (3)O1—C10—H10B109.00
O2—C7—C8115.4 (3)H10A—C10—H10B108.00
C6—C7—C8119.6 (3)O2—C11—H11B109.00
O2—C7—C6125.0 (3)O2—C11—H11C110.00
N1—C8—C9121.6 (2)O2—C11—H11A109.00
N1—C8—C7118.9 (3)H11A—C11—H11C109.00
C7—C8—C9119.5 (3)H11B—C11—H11C110.00
C3—C9—C4123.6 (3)H11A—C11—H11B109.00
C4—C9—C8119.0 (3)
C11—O2—C7—C6−4.0 (5)C2—C3—C9—C81.8 (5)
C11—O2—C7—C8175.5 (3)C9—C4—C5—C60.0 (6)
C8—N1—C1—Cl1−178.2 (2)C5—C4—C9—C3−177.5 (3)
C8—N1—C1—C20.8 (5)C5—C4—C9—C81.6 (5)
C1—N1—C8—C7−178.4 (3)C4—C5—C6—C7−1.3 (6)
C1—N1—C8—C91.5 (4)C5—C6—C7—O2−179.7 (3)
Cl1—C1—C2—C3177.3 (2)C5—C6—C7—C80.9 (5)
Cl1—C1—C2—C10−3.6 (4)O2—C7—C8—N11.1 (4)
N1—C1—C2—C3−1.7 (5)O2—C7—C8—C9−178.8 (3)
N1—C1—C2—C10177.4 (3)C6—C7—C8—N1−179.3 (3)
C1—C2—C3—C90.3 (5)C6—C7—C8—C90.8 (5)
C10—C2—C3—C9−178.8 (3)N1—C8—C9—C3−2.7 (4)
C1—C2—C10—O1−179.0 (3)N1—C8—C9—C4178.1 (3)
C3—C2—C10—O10.1 (5)C7—C8—C9—C3177.1 (3)
C2—C3—C9—C4−179.1 (3)C7—C8—C9—C4−2.0 (4)
Cg1 is the centroid of the N1/C1–C3/C8/C9 ring.
D—H···AD—HH···AD···AD—H···A
O1—H1O···O3i0.821.902.705 (4)165
O3—H1W···N1ii0.85 (5)2.17 (5)2.988 (4)163 (4)
O3—H2W···O1iii0.83 (4)2.02 (4)2.836 (4)171 (5)
C10—H10B···Cg1i0.972.933.738 (5)142
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the N1/C1–C3/C8/C9 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1O⋯O3i0.821.902.705 (4)165
O3—H1W⋯N1ii0.85 (5)2.17 (5)2.988 (4)163 (4)
O3—H2W⋯O1iii0.83 (4)2.02 (4)2.836 (4)171 (5)
C10—H10BCg1i0.972.933.738 (5)142

Symmetry codes: (i) ; (ii) ; (iii) .

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2-Chloro-6-methoxy-quinoline-3-carbaldehyde.

Authors:  R Subashini; F Nawaz Khan; Machhindra Gund; Venkatesha R Hathwar; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-13

3.  2-Chloro-benzo[h]quinoline-3-carbaldehyde.

Authors:  S Mohana Roopan; F Nawaz Khan; R Subashini; Venkatesha R Hathwar; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-10

4.  2-Chloro-3-hydroxy-methyl-7,8-dimethyl-quinoline.

Authors:  F Nawaz Khan; S Mohana Roopan; Venkatesha R Hathwar; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-12-19

5.  2-Chloro-3-hydroxy-methyl-6-methoxy-quinoline.

Authors:  F Nawaz Khan; S Mohana Roopan; Venkatesha R Hathwar; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-12-19
  5 in total
  2 in total

1.  (2-Chloro-8-methyl-quinolin-3-yl)methanol.

Authors:  S Mohana Roopan; F Nawaz Khan; Rajesh Kumar; Venkatesha R Hathwar; Mehmet Akkurt
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-05

2.  (2-Chloro-6-methyl-quinolin-3-yl)methanol.

Authors:  F Nawaz Khan; S Mohana Roopan; Atul Kumar Kushwaha; Venkatesha R Hathwar; Mehmet Akkurt
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-05
  2 in total

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