Literature DB >> 21587769

(Acetato-κO,O')bis-(1,10-phenanthroline-κN,N')copper(II) trifluoro-acetate tetra-hydrate.

Jinxia Wang, Zhuping Jin.   

Abstract

In the title compound, [Cu(CH(3)CO(2))(C(12)n class="Species">H(8)N(2))(2)](CF(3)CO(2))·4H(2)O, the Cu(II) atom shows a distorted octa-hedral coordination with four N atoms [Cu-N = 2.015 (3)-2.244 (3) Å] from the two phenanthroline ligands and two O atoms from the acetate [Cu-O = 1.953 (3) and 2.764 (3) Å]. Strong inter-molecular O-H⋯O hydrogen-bonding inter-actions consolidate the crystal packing. The F atoms of the anion are disordered over two positions in a 0.5233 (3):0.4767 (3) ratio.

Entities:  

Year:  2010        PMID: 21587769      PMCID: PMC3007037          DOI: 10.1107/S1600536810024359

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For metaln class="Chemical">1,10-phenanthroline complexes with carboxyl­ates, see: Sun et al. (2007 ▶); Liu et al. (2009 ▶).

Experimental

Crystal data

[Cu(C2H3O2)(n class="CellLine">C12H8N2)2](C2F3O2)·4H2O M = 668.08 Triclinic, a = 8.9019 (7) Å b = 11.6662 (9) Å c = 15.698 (1) Å α = 101.619 (1)° β = 101.512 (1)° γ = 108.514 (1)° V = 1451.98 (19) Å3 Z = 2 Mo Kα radiation μ = 0.83 mm−1 T = 293 K 0.28 × 0.25 × 0.19 mm

Data collection

Bruker SMART APEX diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.801, T max = 0.859 7689 measured reflections 5112 independent reflections 4389 reflections with I > 2σ(I) R int = 0.043

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.159 S = 1.02 5112 reflections 425 parameters 103 restraints H-atom parameters constrained Δρmax = 1.04 e Å−3 Δρmin = −0.87 e Å−3 Data collection: SMART (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP in SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810024359/ez2212sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810024359/ez2212Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C2H3O2)(C12H8N2)2](C2F3O2)·4H2OZ = 2
Mr = 668.08F(000) = 686
Triclinic, P1Dx = 1.528 Mg m3
a = 8.9019 (7) ÅMo Kα radiation, λ = 0.71073 Å
b = 11.6662 (9) ÅCell parameters from 4430 reflections
c = 15.698 (1) Åθ = 2.5–27.8°
α = 101.619 (1)°µ = 0.83 mm1
β = 101.512 (1)°T = 293 K
γ = 108.514 (1)°Block, blue
V = 1451.98 (19) Å30.28 × 0.25 × 0.19 mm
Bruker SMART APEX diffractometer5112 independent reflections
Radiation source: fine-focus sealed tube4389 reflections with I > 2σ(I)
graphiteRint = 0.043
phi and ω scansθmax = 25.1°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −10→10
Tmin = 0.801, Tmax = 0.859k = −13→13
7689 measured reflectionsl = −18→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.051Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.159H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.108P)2 + 0.7243P] where P = (Fo2 + 2Fc2)/3
5112 reflections(Δ/σ)max = 0.002
425 parametersΔρmax = 1.04 e Å3
103 restraintsΔρmin = −0.86 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Cu10.70769 (5)0.42710 (4)0.71713 (3)0.0397 (2)
F10.083 (2)0.9968 (17)0.6171 (10)0.133 (4)0.52 (2)
F20.138 (2)0.8377 (11)0.5566 (10)0.118 (4)0.52 (2)
F30.3252 (15)1.0243 (15)0.6021 (9)0.121 (4)0.52 (2)
F1'0.0317 (13)0.9385 (17)0.5837 (12)0.120 (4)0.48 (2)
F2'0.206 (2)0.8680 (17)0.5546 (10)0.117 (4)0.48 (2)
F3'0.263 (2)1.0720 (11)0.6148 (9)0.116 (4)0.48 (2)
N10.5545 (4)0.3202 (3)0.5937 (2)0.0432 (8)
N20.5668 (4)0.5324 (3)0.6982 (2)0.0440 (8)
N30.6031 (4)0.3667 (3)0.8268 (2)0.0439 (8)
N40.8712 (4)0.5606 (3)0.8296 (2)0.0428 (8)
O10.8368 (4)0.3195 (3)0.7158 (2)0.0491 (7)
O20.9846 (4)0.4555 (4)0.6563 (2)0.0676 (9)
O30.1324 (9)0.8811 (7)0.7380 (5)0.146 (2)
O40.3983 (7)0.9689 (5)0.7462 (4)0.1105 (16)
O50.7803 (6)0.8614 (5)0.9518 (4)0.1055 (15)
H5A0.81300.86790.90510.127*
H5B0.84800.92070.99780.127*
O60.7421 (6)0.0847 (4)0.7568 (4)0.0954 (14)
H6A0.75870.15080.73920.115*
H6B0.64190.05420.75700.115*
O70.5361 (8)0.9627 (7)0.9249 (4)0.139 (2)
H7A0.61160.93270.92560.166*
H7B0.52760.99630.88180.166*
O80.9949 (10)1.0217 (8)0.8494 (5)0.176 (3)
H8A0.89090.99970.82940.211*
H8B1.02760.97990.81130.211*
C10.9569 (5)0.3597 (5)0.6812 (3)0.0505 (10)
C21.0606 (7)0.2817 (6)0.6725 (4)0.0720 (15)
H2A1.01920.21090.69510.108*
H2B1.17310.33150.70710.108*
H2C1.05560.25220.60990.108*
C31.0023 (6)0.6569 (4)0.8305 (3)0.0539 (11)
H31.02260.66440.77570.065*
C41.1096 (6)0.7466 (4)0.9102 (4)0.0624 (13)
H41.19980.81260.90820.075*
C51.0821 (6)0.7371 (4)0.9907 (3)0.0583 (12)
H51.15330.79661.04440.070*
C60.9449 (5)0.6366 (4)0.9928 (3)0.0497 (10)
C70.8417 (5)0.5507 (4)0.9101 (3)0.0402 (9)
C80.6997 (5)0.4478 (4)0.9087 (3)0.0401 (9)
C90.6667 (6)0.4339 (4)0.9899 (3)0.0511 (11)
C100.5254 (7)0.3300 (5)0.9842 (4)0.0659 (14)
H100.49850.31741.03680.079*
C110.4303 (7)0.2496 (5)0.9031 (4)0.0676 (14)
H110.33780.18090.89920.081*
C120.4720 (6)0.2712 (4)0.8253 (3)0.0544 (11)
H120.40470.21530.76940.065*
C130.7751 (7)0.5228 (5)1.0731 (3)0.0633 (13)
H130.75360.51361.12740.076*
C140.9071 (7)0.6189 (5)1.0746 (3)0.0627 (13)
H140.97550.67531.13010.075*
C150.5530 (6)0.2158 (4)0.5418 (3)0.0566 (11)
H150.63030.18260.56310.068*
C160.4407 (7)0.1531 (5)0.4566 (3)0.0685 (14)
H160.44530.08060.42140.082*
C170.3246 (7)0.1982 (6)0.4250 (3)0.0719 (16)
H170.24760.15560.36870.086*
C180.3210 (5)0.3089 (5)0.4771 (3)0.0568 (12)
C190.4408 (5)0.3674 (4)0.5617 (3)0.0446 (9)
C200.4465 (5)0.4808 (4)0.6192 (3)0.0435 (9)
C210.3284 (5)0.5328 (5)0.5919 (3)0.0549 (11)
C220.3376 (7)0.6413 (6)0.6535 (4)0.0709 (15)
H220.26170.67880.63920.085*
C230.4577 (8)0.6925 (5)0.7343 (4)0.0720 (15)
H230.46220.76370.77570.086*
C240.5729 (6)0.6375 (5)0.7545 (3)0.0585 (12)
H240.65650.67510.80900.070*
C250.2096 (6)0.4726 (6)0.5058 (4)0.0689 (16)
H250.13260.50730.48700.083*
C260.2068 (6)0.3658 (7)0.4505 (4)0.0698 (16)
H260.12850.32950.39410.084*
C270.2466 (9)0.9333 (5)0.7120 (4)0.0738 (16)
C280.1951 (7)0.9529 (5)0.6193 (4)0.0709 (14)
U11U22U33U12U13U23
Cu10.0400 (3)0.0424 (3)0.0318 (3)0.0131 (2)0.0061 (2)0.0079 (2)
F10.127 (8)0.135 (8)0.138 (8)0.076 (6)−0.004 (6)0.033 (6)
F20.108 (8)0.122 (6)0.075 (5)−0.001 (6)0.009 (6)0.010 (5)
F30.109 (7)0.130 (7)0.119 (6)0.005 (6)0.049 (5)0.070 (6)
F1'0.071 (6)0.127 (8)0.130 (8)0.013 (6)0.004 (5)0.032 (6)
F2'0.118 (8)0.148 (8)0.071 (5)0.060 (7)0.024 (6)−0.015 (6)
F3'0.127 (8)0.102 (7)0.094 (6)0.006 (6)0.018 (6)0.050 (5)
N10.0406 (18)0.0477 (19)0.0347 (17)0.0091 (15)0.0117 (14)0.0089 (15)
N20.0454 (19)0.0455 (19)0.0408 (18)0.0165 (15)0.0121 (15)0.0125 (15)
N30.0445 (19)0.0401 (18)0.0436 (19)0.0126 (15)0.0115 (15)0.0108 (15)
N40.0416 (18)0.0445 (18)0.0366 (17)0.0123 (15)0.0057 (14)0.0110 (15)
O10.0505 (17)0.0550 (17)0.0462 (16)0.0231 (14)0.0162 (13)0.0159 (14)
O20.072 (2)0.080 (2)0.066 (2)0.0317 (19)0.0306 (18)0.038 (2)
O30.175 (6)0.155 (6)0.132 (5)0.042 (5)0.091 (5)0.077 (5)
O40.098 (4)0.090 (3)0.113 (4)0.023 (3)−0.004 (3)0.020 (3)
O50.093 (3)0.131 (4)0.099 (3)0.045 (3)0.031 (3)0.038 (3)
O60.090 (3)0.075 (3)0.127 (4)0.027 (2)0.034 (3)0.044 (3)
O70.136 (5)0.190 (6)0.109 (4)0.102 (5)0.023 (4)0.029 (4)
O80.203 (8)0.259 (9)0.161 (7)0.159 (7)0.096 (6)0.099 (7)
C10.051 (2)0.068 (3)0.034 (2)0.025 (2)0.0098 (18)0.016 (2)
C20.076 (3)0.102 (4)0.062 (3)0.053 (3)0.032 (3)0.030 (3)
C30.051 (3)0.051 (2)0.051 (3)0.009 (2)0.008 (2)0.018 (2)
C40.047 (3)0.045 (3)0.074 (3)0.004 (2)0.001 (2)0.012 (2)
C50.053 (3)0.048 (3)0.052 (3)0.015 (2)−0.007 (2)−0.003 (2)
C60.052 (2)0.052 (2)0.042 (2)0.026 (2)0.0027 (19)0.0063 (19)
C70.044 (2)0.043 (2)0.0327 (19)0.0205 (18)0.0040 (16)0.0087 (16)
C80.045 (2)0.044 (2)0.038 (2)0.0233 (18)0.0126 (17)0.0132 (17)
C90.062 (3)0.062 (3)0.046 (2)0.036 (2)0.023 (2)0.021 (2)
C100.075 (3)0.078 (4)0.068 (3)0.035 (3)0.041 (3)0.037 (3)
C110.066 (3)0.060 (3)0.083 (4)0.019 (3)0.036 (3)0.029 (3)
C120.054 (3)0.044 (2)0.061 (3)0.012 (2)0.020 (2)0.014 (2)
C130.086 (4)0.079 (4)0.036 (2)0.043 (3)0.022 (2)0.017 (2)
C140.075 (3)0.078 (3)0.033 (2)0.039 (3)0.005 (2)0.004 (2)
C150.058 (3)0.053 (3)0.048 (3)0.010 (2)0.018 (2)0.004 (2)
C160.070 (3)0.063 (3)0.049 (3)0.005 (3)0.020 (2)−0.003 (2)
C170.056 (3)0.086 (4)0.034 (2)−0.008 (3)0.005 (2)−0.002 (2)
C180.041 (2)0.078 (3)0.037 (2)0.001 (2)0.0096 (18)0.019 (2)
C190.034 (2)0.056 (2)0.038 (2)0.0049 (18)0.0116 (16)0.0184 (19)
C200.036 (2)0.055 (2)0.042 (2)0.0124 (18)0.0152 (17)0.0231 (19)
C210.043 (2)0.071 (3)0.064 (3)0.022 (2)0.022 (2)0.039 (3)
C220.066 (3)0.079 (4)0.096 (4)0.043 (3)0.035 (3)0.050 (3)
C230.086 (4)0.062 (3)0.083 (4)0.041 (3)0.032 (3)0.022 (3)
C240.068 (3)0.056 (3)0.055 (3)0.029 (2)0.017 (2)0.013 (2)
C250.039 (2)0.108 (5)0.071 (3)0.024 (3)0.015 (2)0.056 (4)
C260.037 (2)0.115 (5)0.047 (3)0.010 (3)0.005 (2)0.038 (3)
C270.094 (4)0.050 (3)0.073 (4)0.018 (3)0.036 (3)0.010 (3)
C280.069 (3)0.065 (3)0.074 (4)0.015 (3)0.028 (3)0.020 (3)
Cu1—O11.953 (3)C4—H40.9300
Cu1—N12.015 (3)C5—C61.410 (7)
Cu1—N42.022 (3)C5—H50.9300
Cu1—N22.037 (3)C6—C71.397 (6)
Cu1—N32.244 (3)C6—C141.428 (7)
F1—C281.256 (11)C7—C81.433 (6)
F2—C281.367 (12)C8—C91.392 (6)
F3—C281.308 (10)C9—C101.415 (7)
F1'—C281.393 (12)C9—C131.425 (7)
F2'—C281.311 (12)C10—C111.343 (8)
F3'—C281.351 (11)C10—H100.9301
N1—C151.317 (6)C11—C121.392 (7)
N1—C191.357 (5)C11—H110.9300
N2—C241.337 (6)C12—H120.9300
N2—C201.344 (5)C13—C141.334 (8)
N3—C121.326 (6)C13—H130.9300
N3—C81.357 (5)C14—H140.9300
N4—C31.333 (6)C15—C161.389 (7)
N4—C71.361 (5)C15—H150.9300
O1—C11.294 (5)C16—C171.355 (8)
O2—C11.226 (6)C16—H160.9300
O3—C271.202 (8)C17—C181.396 (8)
O4—C271.245 (8)C17—H170.9300
O5—H5A0.8500C18—C191.406 (6)
O5—H5B0.8500C18—C261.422 (8)
O6—H6A0.8501C19—C201.423 (6)
O6—H6B0.8500C20—C211.410 (6)
O7—H7A0.8500C21—C221.397 (8)
O7—H7B0.8501C21—C251.419 (7)
O8—H8A0.8500C22—C231.363 (8)
O8—H8B0.8500C22—H220.9300
C1—C21.494 (7)C23—C241.391 (7)
C2—H2A0.9600C23—H230.9300
C2—H2B0.9600C24—H240.9300
C2—H2C0.9600C25—C261.356 (8)
C3—C41.390 (7)C25—H250.9300
C3—H30.9300C26—H260.9300
C4—C51.353 (8)C27—C281.521 (9)
O1—Cu1—N191.55 (13)C14—C13—C9121.3 (4)
O1—Cu1—N493.66 (13)C14—C13—H13119.3
N1—Cu1—N4169.21 (13)C9—C13—H13119.4
O1—Cu1—N2171.51 (12)C13—C14—C6121.3 (4)
N1—Cu1—N281.21 (14)C13—C14—H14119.2
N4—Cu1—N292.78 (14)C6—C14—H14119.6
O1—Cu1—N393.94 (12)N1—C15—C16122.8 (5)
N1—Cu1—N3110.64 (13)N1—C15—H15118.5
N4—Cu1—N378.44 (13)C16—C15—H15118.7
N2—Cu1—N392.75 (13)C17—C16—C15119.6 (5)
C15—N1—C19117.9 (4)C17—C16—H16120.2
C15—N1—Cu1129.2 (3)C15—C16—H16120.2
C19—N1—Cu1112.9 (3)C16—C17—C18120.0 (4)
C24—N2—C20118.2 (4)C16—C17—H17120.1
C24—N2—Cu1129.2 (3)C18—C17—H17120.0
C20—N2—Cu1112.5 (3)C17—C18—C19116.7 (5)
C12—N3—C8117.7 (4)C17—C18—C26124.9 (5)
C12—N3—Cu1132.8 (3)C19—C18—C26118.4 (5)
C8—N3—Cu1109.5 (2)N1—C19—C18123.0 (4)
C3—N4—C7118.3 (4)N1—C19—C20116.5 (4)
C3—N4—Cu1125.3 (3)C18—C19—C20120.5 (4)
C7—N4—Cu1116.4 (3)N2—C20—C21123.5 (4)
C1—O1—Cu1110.9 (3)N2—C20—C19116.9 (4)
H5A—O5—H5B109.6C21—C20—C19119.6 (4)
H6A—O6—H6B109.6C22—C21—C20116.4 (4)
H7A—O7—H7B109.8C22—C21—C25124.8 (5)
H8A—O8—H8B108.6C20—C21—C25118.8 (5)
O2—C1—O1122.5 (4)C23—C22—C21120.3 (5)
O2—C1—C2121.4 (4)C23—C22—H22119.8
O1—C1—C2116.0 (4)C21—C22—H22119.9
C1—C2—H2A109.0C22—C23—C24119.6 (5)
C1—C2—H2B109.7C22—C23—H23120.1
H2A—C2—H2B109.5C24—C23—H23120.3
C1—C2—H2C109.8N2—C24—C23122.0 (5)
H2A—C2—H2C109.5N2—C24—H24119.3
H2B—C2—H2C109.5C23—C24—H24118.7
N4—C3—C4122.7 (4)C26—C25—C21121.3 (5)
N4—C3—H3118.7C26—C25—H25119.6
C4—C3—H3118.7C21—C25—H25119.2
C5—C4—C3119.5 (5)C25—C26—C18121.4 (5)
C5—C4—H4120.3C25—C26—H26119.1
C3—C4—H4120.2C18—C26—H26119.5
C4—C5—C6119.7 (4)O3—C27—O4130.9 (7)
C4—C5—H5120.2O3—C27—C28113.8 (7)
C6—C5—H5120.1O4—C27—C28115.2 (6)
C7—C6—C5117.6 (4)F1—C28—F3113.6 (9)
C7—C6—C14118.9 (4)F1—C28—F2'127.6 (11)
C5—C6—C14123.5 (4)F3—C28—F2'81.4 (9)
N4—C7—C6122.2 (4)F1—C28—F3'74.3 (9)
N4—C7—C8118.1 (3)F3—C28—F3'40.5 (6)
C6—C7—C8119.6 (4)F2'—C28—F3'113.5 (10)
N3—C8—C9122.7 (4)F1—C28—F2110.5 (9)
N3—C8—C7117.6 (3)F3—C28—F2106.9 (8)
C9—C8—C7119.7 (4)F2'—C28—F226.1 (8)
C8—C9—C10117.2 (4)F3'—C28—F2132.9 (10)
C8—C9—C13119.1 (4)F1—C28—F1'30.7 (7)
C10—C9—C13123.7 (4)F3—C28—F1'126.8 (10)
C11—C10—C9120.0 (5)F2'—C28—F1'99.2 (9)
C11—C10—H10120.0F3'—C28—F1'96.1 (9)
C9—C10—H10120.0F2—C28—F1'79.8 (9)
C10—C11—C12119.0 (5)F1—C28—C27109.3 (8)
C10—C11—H11120.3F3—C28—C27109.3 (8)
C12—C11—H11120.7F2'—C28—C27112.0 (9)
N3—C12—C11123.4 (5)F3'—C28—C27115.4 (7)
N3—C12—H12118.3F2—C28—C27107.1 (8)
C11—C12—H12118.3F1'—C28—C27119.0 (8)
D—H···AD—HH···AD···AD—H···A
O7—H7A···O50.851.952.787 (8)168
O7—H7B···O40.852.112.854 (8)145
O6—H6A···O10.852.002.844 (5)170
O6—H6B···O4i0.852.032.881 (7)175
O8—H8B···O3ii0.852.032.868 (10)171
O8—H8A···O6iii0.852.172.809 (9)132
Cu1—O11.953 (3)
Cu1—N12.015 (3)
Cu1—N42.022 (3)
Cu1—N22.037 (3)
Cu1—N32.244 (3)
O1—Cu1—N191.55 (13)
O1—Cu1—N493.66 (13)
N1—Cu1—N4169.21 (13)
O1—Cu1—N2171.51 (12)
N1—Cu1—N281.21 (14)
N4—Cu1—N292.78 (14)
O1—Cu1—N393.94 (12)
N1—Cu1—N3110.64 (13)
N4—Cu1—N378.44 (13)
N2—Cu1—N392.75 (13)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O7—H7A⋯O50.851.952.787 (8)168
O7—H7B⋯O40.852.112.854 (8)145
O6—H6A⋯O10.852.002.844 (5)170
O6—H6B⋯O4i0.852.032.881 (7)175
O8—H8B⋯O3ii0.852.032.868 (10)171
O8—H8A⋯O6iii0.852.172.809 (9)132

Symmetry codes: (i) ; (ii) ; (iii) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Aqua-bis(dichloro-acetato-κO)(1,10-phenanthroline-κN,N')copper(II).

Authors:  Yaru Liu; Jianzhong Ning; Junshan Sun; Chuan Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-12-20
  2 in total

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