Literature DB >> 21587752

catena-Poly[[diaqua-bis-(isoquinoline-κN)cobalt(II)]-μ-succinato-κO:O].

Meng-Jiao Li1, Jing-Jing Nie, Duan-Jun Xu.   

Abstract

In the title compound, [Co(C(4)H(4)O(4))(C(9)H(7)N)(2)(H(2)O)(2)](n), the Co(II) cation, located on an inversion center, is coordinated by two succinate anions, two isoquinoline ligands and two water mol-ecules in a distorted octa-hedral geometry. The succinate anion, located across another inversion center, bridges the Co cations, forming polymeric chains running along the b axis. The partially overlapped arrangement of parallel isoquinoline ring systems of adjacent polymeric chains and the shorter face-to-face distance of 3.402 (6) Å indicates the existence of weak π-π stacking in the crystal structure. Classical intra- and inter-molecular O-H⋯O hydrogen bonding and weak non-classical inter-molecular C-H⋯O hydrogen bonding help to stabilize the crystal structure.

Entities:  

Year:  2010        PMID: 21587752      PMCID: PMC3006983          DOI: 10.1107/S1600536810023895

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to π–π stacking, see: Deisenhofer & Michel (1989 ▶); Su & Xu (2004 ▶); Xu et al. (2007 ▶). For two related isoquinoline complexes, see: Li et al. (2009a ▶,b ▶). For a related polymeric NiII complex bridged by succinate anions, see: Liu et al. (2003 ▶).

Experimental

Crystal data

[Co(C4H4O4)(C9H7N)2(H2O)2] M = 469.35 Monoclinic, a = 11.258 (4) Å b = 9.023 (5) Å c = 11.390 (7) Å β = 114.667 (5)° V = 1051.4 (9) Å3 Z = 2 Mo Kα radiation μ = 0.86 mm−1 T = 294 K 0.24 × 0.14 × 0.12 mm

Data collection

Rigaku R-AXIS RAPID IP diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.788, T max = 0.862 4907 measured reflections 1891 independent reflections 1165 reflections with I > 2σ(I) R int = 0.040

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.057 S = 0.82 1891 reflections 142 parameters H-atom parameters constrained Δρmax = 0.23 e Å−3 Δρmin = −0.23 e Å−3 Data collection: PROCESS-AUTO (Rigaku, 1998 ▶); cell refinement: PROCESS-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002 ▶); program(s) used to solve structure: SIR92 (Altomare et al., 1993 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810023895/rk2211sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810023895/rk2211Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Co(C4H4O4)(C9H7N)2(H2O)2]F(000) = 486
Mr = 469.35Dx = 1.482 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 2408 reflections
a = 11.258 (4) Åθ = 3.5–24.6°
b = 9.023 (5) ŵ = 0.86 mm1
c = 11.390 (7) ÅT = 294 K
β = 114.667 (5)°Prism, pink
V = 1051.4 (9) Å30.24 × 0.14 × 0.12 mm
Z = 2
Rigaku R-AXIS RAPID IP diffractometer1891 independent reflections
Radiation source: fine-focus sealed tube1165 reflections with I > 2σ(I)
graphiteRint = 0.040
Detector resolution: 10.0 pixels mm-1θmax = 25.2°, θmin = 3.3°
ω–scanh = −13→13
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)k = −10→8
Tmin = 0.788, Tmax = 0.862l = −13→13
4907 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.033Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.057H-atom parameters constrained
S = 0.82w = 1/[σ2(Fo2) + (0.0207P)2] where P = (Fo2 + 2Fc2)/3
1891 reflections(Δ/σ)max < 0.001
142 parametersΔρmax = 0.23 e Å3
0 restraintsΔρmin = −0.23 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Co0.50000.50000.50000.03143 (14)
N10.5562 (2)0.5432 (2)0.34392 (16)0.0394 (6)
O10.50790 (18)0.27225 (15)0.47973 (14)0.0392 (4)
O20.31969 (17)0.21732 (17)0.31456 (15)0.0434 (5)
O1W0.29833 (13)0.50231 (19)0.37221 (11)0.0369 (4)
H1A0.26730.56770.30700.044*
H1B0.28460.42130.32630.044*
C10.6531 (3)0.4608 (3)0.3341 (2)0.0513 (8)
H10.69400.38890.39650.062*
C20.6927 (3)0.4788 (4)0.2376 (2)0.0572 (8)
H20.76000.42050.23570.069*
C30.6326 (3)0.5844 (3)0.1411 (2)0.0462 (7)
C40.6658 (3)0.6069 (4)0.0350 (3)0.0647 (9)
H40.73140.55060.02740.078*
C50.6012 (4)0.7107 (4)−0.0549 (3)0.0698 (10)
H50.62280.7246−0.12460.084*
C60.5030 (4)0.7973 (4)−0.0451 (3)0.0700 (10)
H60.46030.8681−0.10800.084*
C70.4689 (3)0.7791 (3)0.0560 (2)0.0583 (9)
H70.40340.83720.06200.070*
C80.5334 (3)0.6720 (3)0.1506 (2)0.0410 (7)
C90.4999 (3)0.6448 (3)0.2554 (2)0.0399 (6)
H90.43430.70220.26200.048*
C100.4249 (2)0.1817 (2)0.4066 (2)0.0294 (6)
C110.4568 (2)0.0192 (2)0.43056 (17)0.0335 (6)
H11A0.4999−0.01280.37680.040*
H11B0.3758−0.03600.40390.040*
U11U22U33U12U13U23
Co0.0357 (3)0.0151 (2)0.0285 (2)−0.0009 (3)−0.00145 (17)0.0019 (2)
N10.0390 (13)0.0305 (13)0.0367 (11)0.0033 (10)0.0040 (9)0.0038 (9)
O10.0391 (11)0.0153 (8)0.0426 (10)−0.0025 (9)−0.0035 (8)−0.0015 (8)
O20.0444 (12)0.0209 (10)0.0399 (9)0.0028 (8)−0.0073 (8)−0.0005 (8)
O1W0.0410 (9)0.0205 (8)0.0306 (7)0.0015 (10)−0.0034 (6)0.0011 (8)
C10.0472 (19)0.044 (2)0.0487 (15)0.0098 (15)0.0061 (13)0.0064 (13)
C20.0420 (17)0.059 (2)0.0639 (17)0.0070 (17)0.0159 (14)−0.0038 (17)
C30.0436 (19)0.0442 (18)0.0443 (15)−0.0146 (15)0.0119 (13)−0.0090 (14)
C40.061 (2)0.073 (2)0.0654 (19)−0.028 (2)0.0313 (18)−0.0158 (19)
C50.086 (3)0.070 (3)0.056 (2)−0.041 (2)0.033 (2)−0.0074 (19)
C60.096 (3)0.056 (2)0.0468 (18)−0.020 (2)0.0196 (19)0.0072 (16)
C70.072 (2)0.0434 (19)0.0503 (18)−0.0043 (17)0.0166 (17)0.0055 (15)
C80.0474 (19)0.0300 (15)0.0382 (14)−0.0077 (14)0.0104 (12)0.0015 (13)
C90.0428 (17)0.0304 (15)0.0383 (14)−0.0012 (13)0.0087 (12)0.0010 (13)
C100.0384 (16)0.0185 (13)0.0264 (11)0.0001 (13)0.0087 (11)0.0025 (11)
C110.0413 (14)0.0142 (13)0.0323 (11)0.0007 (12)0.0030 (9)0.0003 (11)
Co—N1i2.157 (2)C3—C81.409 (4)
Co—N12.157 (2)C3—C41.420 (4)
Co—O12.0740 (18)C4—C51.354 (4)
Co—O1i2.0740 (18)C4—H40.9300
Co—O1Wi2.1249 (14)C5—C61.397 (5)
Co—O1W2.1249 (14)C5—H50.9300
N1—C91.314 (3)C6—C71.367 (4)
N1—C11.363 (3)C6—H60.9300
O1—C101.259 (3)C7—C81.404 (4)
O2—C101.253 (3)C7—H70.9300
O1W—H1A0.8975C8—C91.416 (3)
O1W—H1B0.8743C9—H90.9300
C1—C21.357 (3)C10—C111.507 (3)
C1—H10.9300C11—C11ii1.511 (4)
C2—C31.398 (4)C11—H11A0.9700
C2—H20.9300C11—H11B0.9700
O1—Co—O1i180.0C2—C3—C4123.6 (3)
O1—Co—O1Wi89.04 (7)C8—C3—C4118.9 (3)
O1i—Co—O1Wi90.96 (7)C5—C4—C3119.6 (3)
O1—Co—O1W90.96 (7)C5—C4—H4120.2
O1i—Co—O1W89.04 (7)C3—C4—H4120.2
O1Wi—Co—O1W180.0C4—C5—C6121.3 (3)
O1—Co—N1i87.33 (7)C4—C5—H5119.4
O1i—Co—N1i92.67 (7)C6—C5—H5119.4
O1Wi—Co—N1i91.76 (7)C7—C6—C5120.7 (3)
O1W—Co—N1i88.24 (7)C7—C6—H6119.7
O1—Co—N192.67 (7)C5—C6—H6119.7
O1i—Co—N187.33 (7)C6—C7—C8119.5 (3)
O1Wi—Co—N188.24 (7)C6—C7—H7120.3
O1W—Co—N191.76 (7)C8—C7—H7120.3
N1i—Co—N1180.0C7—C8—C3120.0 (2)
C9—N1—C1117.7 (2)C7—C8—C9122.1 (3)
C9—N1—Co123.03 (19)C3—C8—C9117.8 (2)
C1—N1—Co119.26 (16)N1—C9—C8123.7 (3)
C10—O1—Co131.47 (16)N1—C9—H9118.2
Co—O1W—H1A120.6C8—C9—H9118.2
Co—O1W—H1B105.9O2—C10—O1124.7 (2)
H1A—O1W—H1B98.3O2—C10—C11118.2 (2)
C2—C1—N1123.1 (2)O1—C10—C11117.2 (2)
C2—C1—H1118.5C10—C11—C11ii114.4 (2)
N1—C1—H1118.5C10—C11—H11A108.7
C1—C2—C3120.3 (3)C11ii—C11—H11A108.7
C1—C2—H2119.9C10—C11—H11B108.7
C3—C2—H2119.9C11ii—C11—H11B108.7
C2—C3—C8117.4 (2)H11A—C11—H11B107.6
D—H···AD—HH···AD···AD—H···A
O1W—H1A···O2iii0.901.892.774 (3)169
O1W—H1B···O20.871.902.689 (3)150
C5—H5···O2iv0.932.563.487 (5)176
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1A⋯O2i0.901.892.774 (3)169
O1W—H1B⋯O20.871.902.689 (3)150
C5—H5⋯O2ii0.932.563.487 (5)176

Symmetry codes: (i) ; (ii) .

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