Literature DB >> 21587717

(2-{[1,1-Bis(hy-droxy-meth-yl)-2-oxidoeth-yl]imino-meth-yl}-4-chloro-phenolato-κO,N,O')dibutyl-tin(IV).

See Mun Lee1, Hapipah Mohd Ali, Kong Mun Lo.   

Abstract

In the title compound, [Sn(C(4)H(9))(2)(C(11)H(12)BrNO(4))], the Schiff base ligand chelates to the Sn(IV) atom through the two deprotonated hy-droxy groups, as well as through the N atom, to confer an overall cis-C(2)SnNO(2) trigonal-bipyramidal geometry at the Sn(IV) atom [C-Sn-C = 129.92 (9)°]. The remaining methyl-enehy-droxy groups engage in O-H⋯O hydrogen bonding with the O atoms of adjacent mol-ecules, leading to infinite supra-molecular chains propagating in [001].

Entities:  

Year:  2010        PMID: 21587717      PMCID: PMC3006995          DOI: 10.1107/S1600536810021872

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see Reisi et al. (2010 ▶); Ng (2008 ▶).

Experimental

Crystal data

[Sn(C4H9)2(C11H12BrNO4)] M = 535.04 Monoclinic, a = 18.8326 (9) Å b = 13.3811 (7) Å c = 16.5768 (8) Å β = 91.385 (3)° V = 4176.1 (4) Å3 Z = 8 Mo Kα radiation μ = 3.16 mm−1 T = 100 K 0.40 × 0.10 × 0.08 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.365, T max = 0.786 19535 measured reflections 4785 independent reflections 4229 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.022 wR(F 2) = 0.052 S = 1.02 4785 reflections 239 parameters 2 restraints H-atom parameters constrained Δρmax = 0.65 e Å−3 Δρmin = −0.38 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: pubCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810021872/xu2772sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810021872/xu2772Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Sn(C4H9)2(C11H12BrNO4)]F(000) = 2144
Mr = 535.04Dx = 1.702 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 7855 reflections
a = 18.8326 (9) Åθ = 2.2–30.4°
b = 13.3811 (7) ŵ = 3.16 mm1
c = 16.5768 (8) ÅT = 100 K
β = 91.385 (3)°Needle, yellow
V = 4176.1 (4) Å30.40 × 0.10 × 0.08 mm
Z = 8
Bruker APEXII CCD area-detector diffractometer4785 independent reflections
Radiation source: fine-focus sealed tube4229 reflections with I > 2σ(I)
graphiteRint = 0.032
ω scansθmax = 27.5°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −24→24
Tmin = 0.365, Tmax = 0.786k = −17→17
19535 measured reflectionsl = −21→21
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.022Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.052H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0231P)2 + 4.784P] where P = (Fo2 + 2Fc2)/3
4785 reflections(Δ/σ)max = 0.001
239 parametersΔρmax = 0.65 e Å3
2 restraintsΔρmin = −0.37 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Sn10.325854 (7)0.128538 (10)0.254101 (8)0.01133 (5)
Br10.047899 (12)0.180095 (17)−0.072373 (14)0.02090 (6)
N10.33348 (9)0.06301 (13)0.13219 (10)0.0117 (3)
O10.27217 (8)0.24249 (11)0.18796 (9)0.0154 (3)
O20.39697 (8)0.00855 (11)0.27086 (8)0.0141 (3)
O30.51910 (7)−0.01628 (11)0.10327 (9)0.0139 (3)
H30.5442−0.01110.14560.021*
O40.37130 (8)−0.06319 (12)−0.01932 (8)0.0151 (3)
H40.4107−0.0416−0.03440.023*
C10.22983 (11)0.14839 (15)0.07343 (12)0.0119 (4)
C20.22471 (11)0.22806 (16)0.12949 (12)0.0132 (4)
C30.16695 (12)0.29422 (16)0.12036 (12)0.0153 (4)
H3A0.16380.35020.15540.018*
C40.11478 (11)0.27967 (17)0.06175 (13)0.0155 (4)
H4A0.07510.32340.05810.019*
C50.12066 (11)0.19991 (16)0.00753 (12)0.0148 (4)
C60.17791 (11)0.13705 (16)0.01159 (13)0.0144 (4)
H60.18260.0856−0.02740.017*
C70.28804 (11)0.07801 (16)0.07408 (12)0.0125 (4)
H70.29330.03880.02680.015*
C80.39114 (11)−0.01213 (15)0.12512 (12)0.0116 (4)
C90.39651 (11)−0.06281 (16)0.20865 (12)0.0130 (4)
H9A0.3557−0.10850.21500.016*
H9B0.4406−0.10300.21240.016*
C100.45890 (10)0.04737 (15)0.10849 (12)0.0117 (4)
H10A0.45250.08470.05730.014*
H10B0.46720.09660.15230.014*
C110.37745 (11)−0.09448 (16)0.06228 (12)0.0131 (4)
H11A0.4167−0.14360.06680.016*
H11B0.3331−0.12960.07620.016*
C120.23527 (12)0.06420 (17)0.30964 (14)0.0191 (5)
H12A0.22080.00440.27810.023*
H12B0.25000.04100.36420.023*
C130.17028 (12)0.13118 (19)0.31788 (16)0.0259 (5)
H13A0.18160.18460.35740.031*
H13B0.15970.16350.26520.031*
C140.10488 (13)0.07612 (19)0.34454 (17)0.0272 (5)
H14A0.11680.03970.39510.033*
H14B0.09180.02580.30300.033*
C150.04070 (14)0.1421 (2)0.35880 (18)0.0350 (7)
H15A0.04950.18330.40690.052*
H15B−0.00120.10010.36690.052*
H15C0.03230.18540.31190.052*
C160.40219 (11)0.23185 (17)0.30125 (13)0.0164 (4)
H16A0.41610.21020.35650.020*
H16B0.44510.22760.26800.020*
C170.37945 (12)0.34137 (17)0.30495 (14)0.0180 (5)
H17A0.42050.38180.32430.022*
H17B0.36670.36410.24960.022*
C180.31701 (12)0.36167 (17)0.35918 (14)0.0200 (5)
H18A0.30500.43360.35600.024*
H18B0.27530.32370.33850.024*
C190.33061 (15)0.3340 (2)0.44694 (15)0.0344 (7)
H19A0.33680.26150.45150.052*
H19B0.29010.35490.47890.052*
H19C0.37370.36770.46710.052*
U11U22U33U12U13U23
Sn10.00935 (7)0.01444 (8)0.01012 (7)0.00111 (5)−0.00151 (5)−0.00132 (5)
Br10.01670 (11)0.02112 (12)0.02432 (12)0.00431 (9)−0.01116 (9)−0.00292 (9)
N10.0092 (8)0.0119 (8)0.0140 (8)0.0008 (7)0.0000 (6)0.0013 (7)
O10.0171 (8)0.0148 (7)0.0139 (7)0.0022 (6)−0.0048 (6)−0.0024 (6)
O20.0146 (7)0.0160 (7)0.0116 (7)0.0034 (6)−0.0035 (6)−0.0013 (6)
O30.0092 (7)0.0196 (8)0.0127 (7)0.0046 (6)−0.0028 (6)−0.0026 (6)
O40.0133 (7)0.0214 (8)0.0107 (7)−0.0014 (6)0.0005 (6)−0.0005 (6)
C10.0097 (9)0.0143 (10)0.0117 (10)0.0006 (8)−0.0013 (8)0.0013 (8)
C20.0128 (10)0.0164 (10)0.0105 (9)−0.0011 (8)0.0001 (8)0.0010 (8)
C30.0185 (11)0.0149 (10)0.0126 (10)0.0024 (9)0.0015 (8)−0.0015 (8)
C40.0131 (10)0.0190 (11)0.0144 (10)0.0034 (9)0.0003 (8)0.0031 (8)
C50.0117 (10)0.0188 (11)0.0138 (10)−0.0011 (9)−0.0042 (8)0.0028 (8)
C60.0140 (10)0.0154 (10)0.0136 (10)0.0012 (8)−0.0023 (8)−0.0004 (8)
C70.0119 (10)0.0128 (10)0.0129 (10)−0.0002 (8)0.0018 (8)0.0001 (8)
C80.0096 (9)0.0127 (10)0.0124 (10)0.0032 (8)−0.0003 (7)0.0003 (8)
C90.0120 (10)0.0141 (10)0.0128 (10)0.0027 (8)−0.0009 (8)0.0001 (8)
C100.0095 (9)0.0140 (10)0.0114 (10)0.0009 (8)−0.0010 (7)−0.0002 (8)
C110.0110 (9)0.0144 (10)0.0138 (10)−0.0006 (8)−0.0008 (8)−0.0009 (8)
C120.0155 (11)0.0192 (11)0.0227 (12)−0.0013 (9)0.0043 (9)−0.0017 (9)
C130.0166 (12)0.0316 (14)0.0298 (13)0.0049 (10)0.0043 (10)0.0099 (11)
C140.0196 (12)0.0264 (13)0.0359 (14)−0.0035 (11)0.0077 (10)−0.0110 (11)
C150.0179 (13)0.0498 (18)0.0376 (16)0.0035 (12)0.0062 (11)0.0078 (13)
C160.0115 (10)0.0193 (11)0.0183 (11)0.0024 (9)−0.0016 (8)−0.0034 (9)
C170.0177 (11)0.0174 (11)0.0188 (11)−0.0003 (9)−0.0035 (9)−0.0014 (9)
C180.0201 (11)0.0197 (11)0.0199 (11)0.0051 (9)−0.0042 (9)−0.0049 (9)
C190.0313 (14)0.0536 (18)0.0184 (12)0.0169 (14)0.0004 (11)0.0000 (12)
Sn1—N12.2108 (17)C9—H9B0.9900
Sn1—O12.1203 (15)C10—H10A0.9900
Sn1—O22.1049 (14)C10—H10B0.9900
Sn1—C122.139 (2)C11—H11A0.9900
Sn1—C162.129 (2)C11—H11B0.9900
Br1—C51.901 (2)C12—C131.526 (3)
N1—C71.289 (3)C12—H12A0.9900
N1—C81.487 (3)C12—H12B0.9900
O1—C21.317 (2)C13—C141.510 (3)
O2—C91.405 (2)C13—H13A0.9900
O3—C101.422 (2)C13—H13B0.9900
O3—H30.8400C14—C151.520 (3)
O4—C111.418 (2)C14—H14A0.9900
O4—H40.8400C14—H14B0.9900
C1—C61.408 (3)C15—H15A0.9800
C1—C21.419 (3)C15—H15B0.9800
C1—C71.445 (3)C15—H15C0.9800
C2—C31.408 (3)C16—C171.528 (3)
C3—C41.379 (3)C16—H16A0.9900
C3—H3A0.9500C16—H16B0.9900
C4—C51.401 (3)C17—C181.522 (3)
C4—H4A0.9500C17—H17A0.9900
C5—C61.368 (3)C17—H17B0.9900
C6—H60.9500C18—C191.517 (3)
C7—H70.9500C18—H18A0.9900
C8—C111.534 (3)C18—H18B0.9900
C8—C101.535 (3)C19—H19A0.9800
C8—C91.543 (3)C19—H19B0.9800
C9—H9A0.9900C19—H19C0.9800
O2—Sn1—O1155.60 (6)H10A—C10—H10B108.0
O2—Sn1—C1691.43 (7)O4—C11—C8116.38 (17)
O1—Sn1—C1691.84 (7)O4—C11—H11A108.2
O2—Sn1—C1298.49 (7)C8—C11—H11A108.2
O1—Sn1—C1297.86 (8)O4—C11—H11B108.2
C16—Sn1—C12129.92 (9)C8—C11—H11B108.2
O2—Sn1—N176.29 (6)H11A—C11—H11B107.3
O1—Sn1—N181.56 (6)C13—C12—Sn1116.87 (16)
C16—Sn1—N1122.33 (7)C13—C12—H12A108.1
C12—Sn1—N1107.69 (8)Sn1—C12—H12A108.1
C7—N1—C8121.31 (18)C13—C12—H12B108.1
C7—N1—Sn1124.39 (14)Sn1—C12—H12B108.1
C8—N1—Sn1113.83 (12)H12A—C12—H12B107.3
C2—O1—Sn1125.58 (13)C14—C13—C12113.7 (2)
C9—O2—Sn1115.39 (12)C14—C13—H13A108.8
C10—O3—H3109.5C12—C13—H13A108.8
C11—O4—H4109.5C14—C13—H13B108.8
C6—C1—C2120.06 (19)C12—C13—H13B108.8
C6—C1—C7116.66 (19)H13A—C13—H13B107.7
C2—C1—C7123.25 (19)C13—C14—C15114.8 (2)
O1—C2—C3119.74 (19)C13—C14—H14A108.6
O1—C2—C1122.45 (19)C15—C14—H14A108.6
C3—C2—C1117.81 (19)C13—C14—H14B108.6
C4—C3—C2121.5 (2)C15—C14—H14B108.6
C4—C3—H3A119.2H14A—C14—H14B107.5
C2—C3—H3A119.2C14—C15—H15A109.5
C3—C4—C5119.6 (2)C14—C15—H15B109.5
C3—C4—H4A120.2H15A—C15—H15B109.5
C5—C4—H4A120.2C14—C15—H15C109.5
C6—C5—C4120.8 (2)H15A—C15—H15C109.5
C6—C5—Br1120.16 (16)H15B—C15—H15C109.5
C4—C5—Br1119.09 (16)C17—C16—Sn1116.73 (14)
C5—C6—C1120.2 (2)C17—C16—H16A108.1
C5—C6—H6119.9Sn1—C16—H16A108.1
C1—C6—H6119.9C17—C16—H16B108.1
N1—C7—C1126.66 (19)Sn1—C16—H16B108.1
N1—C7—H7116.7H16A—C16—H16B107.3
C1—C7—H7116.7C18—C17—C16114.59 (19)
N1—C8—C11115.35 (16)C18—C17—H17A108.6
N1—C8—C10105.98 (16)C16—C17—H17A108.6
C11—C8—C10112.19 (16)C18—C17—H17B108.6
N1—C8—C9104.99 (15)C16—C17—H17B108.6
C11—C8—C9107.46 (17)H17A—C17—H17B107.6
C10—C8—C9110.64 (16)C19—C18—C17114.1 (2)
O2—C9—C8111.04 (17)C19—C18—H18A108.7
O2—C9—H9A109.4C17—C18—H18A108.7
C8—C9—H9A109.4C19—C18—H18B108.7
O2—C9—H9B109.4C17—C18—H18B108.7
C8—C9—H9B109.4H18A—C18—H18B107.6
H9A—C9—H9B108.0C18—C19—H19A109.5
O3—C10—C8111.57 (16)C18—C19—H19B109.5
O3—C10—H10A109.3H19A—C19—H19B109.5
C8—C10—H10A109.3C18—C19—H19C109.5
O3—C10—H10B109.3H19A—C19—H19C109.5
C8—C10—H10B109.3H19B—C19—H19C109.5
O2—Sn1—N1—C7161.51 (18)Sn1—N1—C7—C18.4 (3)
O1—Sn1—N1—C7−28.79 (17)C6—C1—C7—N1−166.4 (2)
C16—Sn1—N1—C7−115.61 (17)C2—C1—C7—N115.8 (3)
C12—Sn1—N1—C766.82 (18)C7—N1—C8—C11−22.0 (3)
O2—Sn1—N1—C8−10.66 (12)Sn1—N1—C8—C11150.45 (14)
O1—Sn1—N1—C8159.04 (14)C7—N1—C8—C10102.8 (2)
C16—Sn1—N1—C872.22 (15)Sn1—N1—C8—C10−84.77 (15)
C12—Sn1—N1—C8−105.35 (14)C7—N1—C8—C9−140.06 (19)
O2—Sn1—O1—C267.9 (2)Sn1—N1—C8—C932.38 (18)
C16—Sn1—O1—C2165.50 (16)Sn1—O2—C9—C841.10 (19)
C12—Sn1—O1—C2−63.76 (17)N1—C8—C9—O2−46.7 (2)
N1—Sn1—O1—C243.07 (16)C11—C8—C9—O2−169.96 (16)
O1—Sn1—O2—C9−42.4 (2)C10—C8—C9—O267.3 (2)
C16—Sn1—O2—C9−140.00 (14)N1—C8—C10—O3177.90 (15)
C12—Sn1—O2—C989.25 (14)C11—C8—C10—O3−55.4 (2)
N1—Sn1—O2—C9−17.01 (13)C9—C8—C10—O364.6 (2)
Sn1—O1—C2—C3144.75 (16)N1—C8—C11—O463.8 (2)
Sn1—O1—C2—C1−36.3 (3)C10—C8—C11—O4−57.7 (2)
C6—C1—C2—O1−179.37 (19)C9—C8—C11—O4−179.53 (16)
C7—C1—C2—O1−1.7 (3)O2—Sn1—C12—C13174.84 (17)
C6—C1—C2—C3−0.4 (3)O1—Sn1—C12—C13−23.33 (19)
C7—C1—C2—C3177.28 (19)C16—Sn1—C12—C1375.8 (2)
O1—C2—C3—C4−177.65 (19)N1—Sn1—C12—C13−106.93 (18)
C1—C2—C3—C43.4 (3)Sn1—C12—C13—C14170.31 (17)
C2—C3—C4—C5−2.9 (3)C12—C13—C14—C15176.0 (2)
C3—C4—C5—C6−0.7 (3)O2—Sn1—C16—C17−179.92 (16)
C3—C4—C5—Br1179.46 (16)O1—Sn1—C16—C1724.26 (16)
C4—C5—C6—C13.6 (3)C12—Sn1—C16—C17−77.59 (19)
Br1—C5—C6—C1−176.54 (16)N1—Sn1—C16—C17105.44 (16)
C2—C1—C6—C5−3.0 (3)Sn1—C16—C17—C1862.2 (2)
C7—C1—C6—C5179.12 (19)C16—C17—C18—C1960.7 (3)
C8—N1—C7—C1179.97 (19)
D—H···AD—HH···AD···AD—H···A
O3—H3···O2i0.841.772.608 (2)174
O4—H4···O3ii0.841.932.733 (2)160
Table 1

Selected bond lengths (Å)

Sn1—N12.2108 (17)
Sn1—O12.1203 (15)
Sn1—O22.1049 (14)
Sn1—C122.139 (2)
Sn1—C162.129 (2)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3⋯O2i0.841.772.608 (2)174
O4—H4⋯O3ii0.841.932.733 (2)160

Symmetry codes: (i) ; (ii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Low-temperature redetermination of 4-chloro-2-[tris-(hydroxy-meth-yl)methyl-imino-meth-yl]phenol as zwitterionic 4-chloro-2-[tris-(hydroxy-meth-yl)methyl-iminiometh-yl]phenolate.

Authors:  Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-11-26

3.  (2-{[1,1-Bis(hydroxy-meth-yl)-2-oxidoeth-yl]imino-meth-yl}-4-chloro-phenolato-κN,O,O')dibutyl-tin(IV).

Authors:  Reza Reisi; Misni Misran; Kong Mun Lo; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-03-31
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.