Literature DB >> 21580562

(2-{[1,1-Bis(hydroxy-meth-yl)-2-oxidoeth-yl]imino-meth-yl}-4-chloro-phenolato-κN,O,O')dibutyl-tin(IV).

Reza Reisi1, Misni Misran, Kong Mun Lo, Seik Weng Ng.   

Abstract

The Schiff base ligand in the title compound, [Sn(C(4)H(9))(2)(C(11)H(12)ClNO(4))], chelates to the Sn atom through the two deprotonated O atoms, as well as through the N atom, to confer an overall cis-C(2)SnNO(2) trigonal-bipyramidal geometry at tin [C-Sn-C = 130.3 (1)°]. The hydr-oxy groups engage in O-H⋯O hydrogen bonding with the O atoms of adjacent mol-ecules, generating a chain running along the c axis.

Entities:  

Year:  2010        PMID: 21580562      PMCID: PMC2983778          DOI: 10.1107/S1600536810011384

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structure of the uncoordinated Schiff base, see: Ng (2008 ▶).

Experimental

Crystal data

[Sn(C4H9)2(C11H12ClNO4)] M = 490.58 Monoclinic, a = 18.6212 (2) Å b = 13.4657 (2) Å c = 16.6949 (1) Å β = 91.845 (1)° V = 4184.03 (8) Å3 Z = 8 Mo Kα radiation μ = 1.37 mm−1 T = 123 K 0.43 × 0.30 × 0.25 mm

Data collection

Bruker SMART APEX diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.590, T max = 0.726 23501 measured reflections 4803 independent reflections 4350 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.020 wR(F 2) = 0.064 S = 0.94 4803 reflections 243 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.60 e Å−3 Δρmin = −0.31 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810011384/bt5229sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810011384/bt5229Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Sn(C4H9)2(C11H12ClNO4)]F(000) = 2000
Mr = 490.58Dx = 1.558 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 9381 reflections
a = 18.6212 (2) Åθ = 2.2–31.7°
b = 13.4657 (2) ŵ = 1.37 mm1
c = 16.6949 (1) ÅT = 123 K
β = 91.845 (1)°Block, yellow
V = 4184.03 (8) Å30.43 × 0.30 × 0.25 mm
Z = 8
Bruker SMART APEX diffractometer4803 independent reflections
Radiation source: fine-focus sealed tube4350 reflections with I > 2σ(I)
graphiteRint = 0.025
ω scansθmax = 27.5°, θmin = 3.0°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −24→24
Tmin = 0.590, Tmax = 0.726k = −15→17
23501 measured reflectionsl = −21→21
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.020Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.064H atoms treated by a mixture of independent and constrained refinement
S = 0.94w = 1/[σ2(Fo2) + (0.0487P)2 + 2.5005P] where P = (Fo2 + 2Fc2)/3
4803 reflections(Δ/σ)max = 0.001
243 parametersΔρmax = 0.60 e Å3
2 restraintsΔρmin = −0.31 e Å3
xyzUiso*/Ueq
Sn10.324176 (5)0.374067 (8)0.254047 (6)0.01818 (5)
Cl10.05353 (3)0.31243 (4)−0.07291 (3)0.03821 (13)
N10.33156 (7)0.43789 (10)0.13234 (8)0.0169 (3)
O10.26803 (7)0.26136 (9)0.18945 (7)0.0251 (3)
O20.39660 (6)0.49305 (9)0.27014 (7)0.0213 (2)
O30.51910 (6)0.51554 (9)0.10309 (7)0.0208 (2)
O40.37037 (6)0.56261 (10)−0.01897 (7)0.0233 (3)
C10.40248 (10)0.27086 (14)0.29943 (12)0.0280 (4)
H1A0.44520.27570.26580.034*
H1B0.41750.29220.35420.034*
C20.38064 (11)0.16181 (15)0.30333 (12)0.0318 (4)
H2A0.36690.13910.24860.038*
H2B0.42290.12240.32180.038*
C30.31878 (12)0.14046 (16)0.35828 (14)0.0367 (5)
H3A0.27610.17860.33920.044*
H3B0.30660.06900.35460.044*
C40.33487 (16)0.1662 (3)0.44466 (15)0.0629 (8)
H4A0.29300.15070.47650.094*
H4B0.34580.23720.44920.094*
H4C0.37630.12760.46460.094*
C50.23412 (10)0.43890 (15)0.31046 (12)0.0298 (4)
H5A0.24990.45970.36510.036*
H5B0.22040.49970.28040.036*
C60.16740 (12)0.37495 (16)0.31741 (16)0.0403 (5)
H6A0.15470.34690.26400.048*
H6B0.17890.31870.35380.048*
C70.10287 (11)0.42862 (17)0.34800 (15)0.0420 (5)
H7A0.08890.48140.30920.050*
H7B0.11680.46140.39930.050*
C80.03807 (14)0.3637 (2)0.36135 (19)0.0559 (7)
H8A−0.00080.40420.38220.084*
H8B0.05090.31140.40000.084*
H8C0.02210.33340.31040.084*
C90.22124 (9)0.27459 (12)0.12977 (9)0.0194 (3)
C100.16258 (9)0.20867 (13)0.11998 (10)0.0236 (3)
H100.15840.15440.15590.028*
C110.11135 (9)0.22152 (14)0.05944 (10)0.0245 (4)
H110.07100.17850.05570.029*
C120.11877 (9)0.29764 (13)0.00376 (10)0.0230 (3)
C130.17673 (10)0.36033 (13)0.00828 (11)0.0229 (4)
H130.18260.4098−0.03150.028*
C140.22784 (8)0.35110 (13)0.07241 (10)0.0186 (3)
C150.28649 (8)0.42135 (12)0.07342 (10)0.0181 (3)
H150.29250.45910.02610.022*
C160.38984 (8)0.51236 (12)0.12515 (9)0.0159 (3)
C170.39581 (9)0.56345 (12)0.20768 (9)0.0192 (3)
H17A0.44040.60340.21120.023*
H17B0.35460.60900.21360.023*
C180.45807 (8)0.45272 (12)0.10880 (10)0.0180 (3)
H18A0.46670.40420.15260.022*
H18B0.45100.41520.05810.022*
C190.37587 (9)0.59373 (13)0.06223 (10)0.0201 (3)
H19B0.33070.62820.07520.024*
H19A0.41520.64310.06740.024*
H3O0.5441 (11)0.5129 (19)0.1452 (9)0.043 (7)*
H4O0.4099 (8)0.5403 (17)−0.0338 (13)0.036 (6)*
U11U22U33U12U13U23
Sn10.01691 (8)0.02207 (8)0.01539 (8)−0.00301 (4)−0.00201 (5)0.00291 (4)
Cl10.0319 (2)0.0357 (3)0.0454 (3)−0.00971 (19)−0.0231 (2)0.0064 (2)
N10.0143 (6)0.0188 (7)0.0176 (6)−0.0016 (5)0.0002 (5)0.0011 (5)
O10.0287 (6)0.0245 (6)0.0215 (6)−0.0075 (5)−0.0081 (5)0.0056 (5)
O20.0235 (6)0.0246 (6)0.0157 (5)−0.0051 (5)−0.0039 (4)0.0021 (5)
O30.0147 (5)0.0293 (7)0.0184 (6)−0.0050 (4)−0.0022 (4)0.0037 (5)
O40.0210 (6)0.0322 (7)0.0165 (6)0.0003 (5)0.0003 (5)0.0036 (5)
C10.0220 (8)0.0282 (10)0.0334 (10)−0.0012 (7)−0.0055 (7)0.0062 (8)
C20.0328 (10)0.0266 (10)0.0355 (10)0.0011 (8)−0.0034 (8)0.0027 (8)
C30.0356 (11)0.0367 (11)0.0372 (12)−0.0116 (8)−0.0060 (9)0.0108 (9)
C40.0592 (17)0.094 (2)0.0357 (13)−0.0296 (16)−0.0015 (12)0.0084 (14)
C50.0264 (9)0.0296 (10)0.0337 (10)−0.0011 (7)0.0066 (7)−0.0002 (8)
C60.0269 (10)0.0461 (14)0.0485 (14)−0.0077 (8)0.0097 (9)−0.0149 (10)
C70.0303 (10)0.0395 (12)0.0570 (14)0.0044 (9)0.0120 (10)0.0132 (10)
C80.0296 (12)0.080 (2)0.0587 (17)−0.0080 (11)0.0091 (11)−0.0029 (13)
C90.0205 (8)0.0202 (8)0.0173 (7)−0.0016 (6)−0.0003 (6)−0.0012 (6)
C100.0286 (9)0.0232 (9)0.0189 (8)−0.0089 (7)0.0012 (7)0.0012 (6)
C110.0208 (8)0.0274 (9)0.0252 (9)−0.0083 (7)0.0013 (6)−0.0056 (7)
C120.0197 (8)0.0246 (9)0.0242 (8)−0.0015 (6)−0.0067 (6)−0.0025 (7)
C130.0225 (8)0.0224 (9)0.0234 (9)−0.0034 (6)−0.0059 (7)0.0036 (6)
C140.0166 (7)0.0208 (8)0.0183 (8)−0.0017 (6)−0.0020 (6)−0.0001 (6)
C150.0175 (7)0.0197 (8)0.0170 (7)−0.0016 (6)−0.0004 (6)0.0023 (6)
C160.0144 (7)0.0174 (8)0.0159 (7)−0.0027 (5)−0.0014 (5)0.0000 (6)
C170.0222 (8)0.0188 (8)0.0165 (7)−0.0009 (6)0.0000 (6)−0.0010 (6)
C180.0165 (7)0.0183 (8)0.0191 (7)−0.0018 (6)−0.0008 (6)0.0004 (6)
C190.0213 (8)0.0197 (8)0.0191 (8)0.0003 (6)−0.0011 (6)0.0025 (6)
Sn1—O12.118 (1)C6—C71.506 (3)
Sn1—O22.106 (1)C6—H6A0.9900
Sn1—C12.136 (2)C6—H6B0.9900
Sn1—C52.136 (2)C7—C81.513 (3)
Sn1—N12.215 (1)C7—H7A0.9900
Cl1—C121.7476 (17)C7—H7B0.9900
N1—C151.292 (2)C8—H8A0.9800
N1—C161.4852 (19)C8—H8B0.9800
O1—C91.314 (2)C8—H8C0.9800
O2—C171.4091 (19)C9—C101.413 (2)
O3—C181.4224 (18)C9—C141.415 (2)
O3—H3O0.831 (10)C10—C111.378 (2)
O4—C191.419 (2)C10—H100.9500
O4—H4O0.840 (10)C11—C121.394 (3)
C1—C21.526 (3)C11—H110.9500
C1—H1A0.9900C12—C131.370 (2)
C1—H1B0.9900C13—C141.415 (2)
C2—C31.523 (3)C13—H130.9500
C2—H2A0.9900C14—C151.445 (2)
C2—H2B0.9900C15—H150.9500
C3—C41.504 (3)C16—C191.534 (2)
C3—H3A0.9900C16—C181.535 (2)
C3—H3B0.9900C16—C171.541 (2)
C4—H4A0.9800C17—H17A0.9900
C4—H4B0.9800C17—H17B0.9900
C4—H4C0.9800C18—H18A0.9900
C5—C61.519 (3)C18—H18B0.9900
C5—H5A0.9900C19—H19B0.9900
C5—H5B0.9900C19—H19A0.9900
O2—Sn1—O1156.02 (5)C8—C7—H7A108.5
O2—Sn1—C191.30 (6)C6—C7—H7B108.5
O1—Sn1—C191.98 (6)C8—C7—H7B108.5
O2—Sn1—C598.13 (6)H7A—C7—H7B107.5
O1—Sn1—C597.80 (6)C7—C8—H8A109.5
C1—Sn1—C5130.26 (8)C7—C8—H8B109.5
O2—Sn1—N176.31 (5)H8A—C8—H8B109.5
O1—Sn1—N181.67 (5)C7—C8—H8C109.5
C1—Sn1—N1121.08 (6)H8A—C8—H8C109.5
C5—Sn1—N1108.59 (7)H8B—C8—H8C109.5
C15—N1—C16120.89 (13)O1—C9—C10119.58 (15)
C15—N1—Sn1125.01 (11)O1—C9—C14122.82 (14)
C16—N1—Sn1113.79 (9)C10—C9—C14117.57 (14)
C9—O1—Sn1126.37 (11)C11—C10—C9121.35 (16)
C17—O2—Sn1115.22 (9)C11—C10—H10119.3
C18—O3—H3O110.1 (17)C9—C10—H10119.3
C19—O4—H4O110.5 (16)C10—C11—C12120.03 (15)
C2—C1—Sn1117.49 (12)C10—C11—H11120.0
C2—C1—H1A107.9C12—C11—H11120.0
Sn1—C1—H1A107.9C13—C12—C11120.74 (15)
C2—C1—H1B107.9C13—C12—Cl1119.85 (14)
Sn1—C1—H1B107.9C11—C12—Cl1119.40 (13)
H1A—C1—H1B107.2C12—C13—C14119.79 (16)
C3—C2—C1114.53 (17)C12—C13—H13120.1
C3—C2—H2A108.6C14—C13—H13120.1
C1—C2—H2A108.6C9—C14—C13120.36 (15)
C3—C2—H2B108.6C9—C14—C15123.44 (14)
C1—C2—H2B108.6C13—C14—C15116.18 (15)
H2A—C2—H2B107.6N1—C15—C14126.46 (15)
C4—C3—C2113.76 (19)N1—C15—H15116.8
C4—C3—H3A108.8C14—C15—H15116.8
C2—C3—H3A108.8N1—C16—C19115.43 (12)
C4—C3—H3B108.8N1—C16—C18105.80 (12)
C2—C3—H3B108.8C19—C16—C18112.02 (13)
H3A—C3—H3B107.7N1—C16—C17105.13 (12)
C3—C4—H4A109.5C19—C16—C17107.40 (13)
C3—C4—H4B109.5C18—C16—C17110.87 (12)
H4A—C4—H4B109.5O2—C17—C16111.11 (13)
C3—C4—H4C109.5O2—C17—H17A109.4
H4A—C4—H4C109.5C16—C17—H17A109.4
H4B—C4—H4C109.5O2—C17—H17B109.4
C6—C5—Sn1117.23 (14)C16—C17—H17B109.4
C6—C5—H5A108.0H17A—C17—H17B108.0
Sn1—C5—H5A108.0O3—C18—C16111.62 (13)
C6—C5—H5B108.0O3—C18—H18A109.3
Sn1—C5—H5B108.0C16—C18—H18A109.3
H5A—C5—H5B107.2O3—C18—H18B109.3
C7—C6—C5114.67 (17)C16—C18—H18B109.3
C7—C6—H6A108.6H18A—C18—H18B108.0
C5—C6—H6A108.6O4—C19—C16116.64 (14)
C7—C6—H6B108.6O4—C19—H19B108.1
C5—C6—H6B108.6C16—C19—H19B108.1
H6A—C6—H6B107.6O4—C19—H19A108.1
C6—C7—C8114.9 (2)C16—C19—H19A108.1
C6—C7—H7A108.5H19B—C19—H19A107.3
O2—Sn1—N1—C15−163.22 (14)C9—C10—C11—C123.4 (3)
O1—Sn1—N1—C1526.37 (13)C10—C11—C12—C130.1 (3)
C1—Sn1—N1—C15113.65 (14)C10—C11—C12—Cl1179.67 (14)
C5—Sn1—N1—C15−69.11 (15)C11—C12—C13—C14−3.2 (3)
O2—Sn1—N1—C1610.39 (10)Cl1—C12—C13—C14177.18 (14)
O1—Sn1—N1—C16−160.03 (11)O1—C9—C14—C13178.46 (16)
C1—Sn1—N1—C16−72.75 (12)C10—C9—C14—C130.4 (2)
C5—Sn1—N1—C16104.50 (11)O1—C9—C14—C150.4 (3)
O2—Sn1—O1—C9−64.26 (19)C10—C9—C14—C15−177.68 (16)
C1—Sn1—O1—C9−161.94 (14)C12—C13—C14—C93.0 (3)
C5—Sn1—O1—C966.95 (14)C12—C13—C14—C15−178.85 (16)
N1—Sn1—O1—C9−40.81 (13)C16—N1—C15—C14179.74 (15)
O1—Sn1—O2—C1741.07 (18)Sn1—N1—C15—C14−7.1 (2)
C1—Sn1—O2—C17138.89 (12)C9—C14—C15—N1−14.7 (3)
C5—Sn1—O2—C17−90.09 (12)C13—C14—C15—N1167.15 (17)
N1—Sn1—O2—C1717.16 (10)C15—N1—C16—C1923.6 (2)
O2—Sn1—C1—C2−179.95 (15)Sn1—N1—C16—C19−150.32 (11)
O1—Sn1—C1—C2−23.71 (15)C15—N1—C16—C18−100.89 (16)
C5—Sn1—C1—C278.25 (18)Sn1—N1—C16—C1885.21 (12)
N1—Sn1—C1—C2−105.17 (15)C15—N1—C16—C17141.72 (15)
Sn1—C1—C2—C3−62.2 (2)Sn1—N1—C16—C17−32.18 (14)
C1—C2—C3—C4−61.8 (3)Sn1—O2—C17—C16−41.23 (15)
O2—Sn1—C5—C6−176.69 (16)N1—C16—C17—O246.68 (16)
O1—Sn1—C5—C621.30 (17)C19—C16—C17—O2170.11 (12)
C1—Sn1—C5—C6−78.01 (19)C18—C16—C17—O2−67.21 (16)
N1—Sn1—C5—C6105.09 (17)N1—C16—C18—O3−178.13 (12)
Sn1—C5—C6—C7−172.58 (17)C19—C16—C18—O355.30 (17)
C5—C6—C7—C8−175.3 (2)C17—C16—C18—O3−64.66 (16)
Sn1—O1—C9—C10−146.41 (13)N1—C16—C19—O4−64.69 (18)
Sn1—O1—C9—C1435.5 (2)C18—C16—C19—O456.47 (18)
O1—C9—C10—C11178.29 (16)C17—C16—C19—O4178.44 (13)
C14—C9—C10—C11−3.5 (3)
D—H···AD—HH···AD···AD—H···A
O3—H3o···O2i0.83 (1)1.79 (1)2.612 (2)172 (3)
O4—H4o···O3ii0.84 (1)1.94 (1)2.739 (2)160 (2)
Sn1—O12.118 (1)
Sn1—O22.106 (1)
Sn1—C12.136 (2)
Sn1—C52.136 (2)
Sn1—N12.215 (1)
C1—Sn1—C5130.26 (8)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3o⋯O2i0.83 (1)1.79 (1)2.612 (2)172 (3)
O4—H4o⋯O3ii0.84 (1)1.94 (1)2.739 (2)160 (2)

Symmetry codes: (i) ; (ii) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Low-temperature redetermination of 4-chloro-2-[tris-(hydroxy-meth-yl)methyl-imino-meth-yl]phenol as zwitterionic 4-chloro-2-[tris-(hydroxy-meth-yl)methyl-iminiometh-yl]phenolate.

Authors:  Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-11-26
  2 in total
  2 in total

1.  (2-{[1,1-Bis(hy-droxy-meth-yl)-2-oxidoeth-yl]imino-meth-yl}-4-chloro-phenolato-κO,N,O')dibutyl-tin(IV).

Authors:  See Mun Lee; Hapipah Mohd Ali; Kong Mun Lo
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-16

2.  Crystal structure of (μ-trans-1,2-bis-{2-[(2-oxido-phen-yl)methyl-idene]hydrazin-1-yl-idene}ethane-1,2-diolato-κ3O,O',N)bis-[di-tert-butyl-tin(IV)].

Authors:  Cheikh Ndoye; Waly Diallo; Ousmane Diouf; Aliou Hamady Barry; Mohamed Gaye; Romain Gautier
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2018-05-15
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.