| Literature DB >> 21587678 |
Shao Liang Lim, Chew Hee Ng, Siang Guan Teoh, Wan-Sin Loh, Hoong-Kun Fun.
Abstract
The asymmetric unit of the title complex salt, [Ni(C(10)H(24)N(4))(H(2)O)(2)](C(4)H(2)O(4))·4H(2)O, comprises half of a nickel(II) complex dication, half of a fumarate dianion and two water mol-ecules. Both the Ni(II) cation and fumarate anion lie on a crystallographic inversion center. The Ni(II) ion in the cyclam complex is six-coordinated within a distorted N(4)O(2) octa-hedral geometry, with the four cyclam N atoms in the equatorial plane and the two water mol-ecules in apical positions. The six-membered metalla ring adopts a chair conformation, whereas the five-membered ring exists in a twisted form. In the crystal packing, inter-molecular O-H⋯O hydrogen bonds between the water molecules and the carboxyl groups of the fumarate anions lead to the formation of layers with R(4) (2)(8) ring motifs. Ni(II) complex cations are sandwiched between two such layers, being held in place by O-H⋯O, N-H⋯O and C-H⋯O hydrogen bonds, consolidating a three-dimensional network.Entities:
Year: 2010 PMID: 21587678 PMCID: PMC3007087 DOI: 10.1107/S1600536810020064
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Ni(C10H24N4)(H2O)2](C4H2O4)·4H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 9982 reflections | |
| θ = 3.8–35.1° | |
| µ = 0.95 mm−1 | |
| α = 73.165 (2)° | |
| β = 79.207 (2)° | Block, purple |
| γ = 85.227 (2)° | 0.47 × 0.44 × 0.24 mm |
| Bruker APEXII DUO CCD area-detector diffractometer | 4295 independent reflections |
| Radiation source: fine-focus sealed tube | 4219 reflections with |
| graphite | |
| φ and ω scans | θmax = 34.0°, θmin = 3.0° |
| Absorption correction: multi-scan ( | |
| 12800 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 4295 reflections | Δρmax = 1.27 e Å−3 |
| 142 parameters | Δρmin = −1.18 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.75 (4) |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Ni1 | 1.0000 | 0.5000 | 0.0000 | 0.00889 (11) | |
| O1W | 0.70136 (13) | 0.43457 (11) | 0.07879 (11) | 0.01471 (17) | |
| H1W1 | 0.5819 | 0.4284 | 0.1199 | 0.022* | |
| H2W1 | 0.7631 | 0.3578 | 0.1313 | 0.022* | |
| N1 | 0.90487 (15) | 0.73294 (12) | −0.04325 (12) | 0.01220 (18) | |
| N2 | 0.97429 (15) | 0.48188 (12) | −0.21216 (12) | 0.01229 (18) | |
| C1 | 0.97192 (19) | 0.83674 (14) | −0.19756 (15) | 0.0160 (2) | |
| H1A | 1.1117 | 0.8476 | −0.2125 | 0.019* | |
| H1B | 0.9108 | 0.9411 | −0.2068 | 0.019* | |
| C2 | 0.9231 (2) | 0.77130 (15) | −0.32091 (15) | 0.0188 (2) | |
| H2A | 0.7853 | 0.7497 | −0.2980 | 0.023* | |
| H2B | 0.9461 | 0.8528 | −0.4173 | 0.023* | |
| C3 | 1.0368 (2) | 0.62134 (16) | −0.34023 (14) | 0.0168 (2) | |
| H3A | 1.0178 | 0.6032 | −0.4344 | 0.020* | |
| H3B | 1.1746 | 0.6357 | −0.3474 | 0.020* | |
| C4 | 1.08394 (18) | 0.33580 (15) | −0.22827 (14) | 0.0154 (2) | |
| H4A | 1.2220 | 0.3563 | −0.2578 | 0.018* | |
| H4B | 1.0424 | 0.3011 | −0.3070 | 0.018* | |
| C5 | 0.95195 (18) | 0.79227 (14) | 0.07821 (15) | 0.0144 (2) | |
| H5A | 0.8713 | 0.8855 | 0.0855 | 0.017* | |
| H5B | 1.0873 | 0.8217 | 0.0545 | 0.017* | |
| O1 | 0.52695 (16) | 0.26163 (11) | 0.55707 (11) | 0.01632 (18) | |
| O2 | 0.52311 (19) | 0.08177 (12) | 0.78098 (11) | 0.0224 (2) | |
| C11 | 0.51455 (17) | 0.12258 (13) | 0.64080 (13) | 0.0124 (2) | |
| C12 | 0.48943 (17) | −0.00891 (13) | 0.57443 (12) | 0.0121 (2) | |
| H12A | 0.4574 | −0.1080 | 0.6408 | 0.014* | |
| O2W | 0.52940 (14) | 0.20503 (11) | 0.01387 (11) | 0.01441 (17) | |
| H1W2 | 0.5831 | 0.1689 | −0.0597 | 0.022* | |
| H2W2 | 0.5251 | 0.1297 | 0.0954 | 0.022* | |
| O3W | 0.42354 (14) | 0.50357 (11) | 0.31238 (11) | 0.01463 (18) | |
| H1W3 | 0.4170 | 0.5898 | 0.3362 | 0.022* | |
| H2W3 | 0.3993 | 0.4291 | 0.3948 | 0.022* | |
| H1N1 | 0.779 (3) | 0.719 (3) | −0.034 (3) | 0.018 (5)* | |
| H1N2 | 0.849 (3) | 0.463 (3) | −0.210 (3) | 0.015 (5)* |
| Ni1 | 0.00948 (13) | 0.00806 (13) | 0.00991 (13) | −0.00033 (7) | −0.00201 (7) | −0.00347 (8) |
| O1W | 0.0114 (4) | 0.0161 (4) | 0.0187 (4) | −0.0023 (3) | −0.0003 (3) | −0.0089 (3) |
| N1 | 0.0115 (4) | 0.0103 (4) | 0.0151 (4) | −0.0006 (3) | −0.0026 (3) | −0.0038 (3) |
| N2 | 0.0125 (4) | 0.0134 (4) | 0.0120 (4) | −0.0008 (3) | −0.0025 (3) | −0.0047 (3) |
| C1 | 0.0183 (5) | 0.0108 (4) | 0.0175 (5) | −0.0020 (4) | −0.0043 (4) | −0.0006 (4) |
| C2 | 0.0237 (6) | 0.0158 (5) | 0.0163 (5) | −0.0013 (4) | −0.0087 (4) | −0.0003 (4) |
| C3 | 0.0212 (5) | 0.0180 (5) | 0.0111 (4) | −0.0034 (4) | −0.0030 (4) | −0.0029 (4) |
| C4 | 0.0170 (5) | 0.0161 (5) | 0.0153 (5) | −0.0003 (4) | −0.0011 (4) | −0.0089 (4) |
| C5 | 0.0143 (5) | 0.0117 (4) | 0.0193 (5) | −0.0008 (3) | −0.0023 (4) | −0.0080 (4) |
| O1 | 0.0251 (5) | 0.0105 (4) | 0.0131 (4) | −0.0020 (3) | −0.0028 (3) | −0.0029 (3) |
| O2 | 0.0434 (6) | 0.0145 (4) | 0.0110 (4) | −0.0018 (4) | −0.0080 (4) | −0.0041 (3) |
| C11 | 0.0158 (5) | 0.0113 (4) | 0.0110 (4) | −0.0002 (3) | −0.0017 (3) | −0.0050 (3) |
| C12 | 0.0153 (5) | 0.0107 (4) | 0.0105 (4) | −0.0004 (3) | −0.0019 (3) | −0.0037 (3) |
| O2W | 0.0174 (4) | 0.0131 (4) | 0.0146 (4) | −0.0020 (3) | −0.0032 (3) | −0.0061 (3) |
| O3W | 0.0175 (4) | 0.0144 (4) | 0.0134 (4) | −0.0017 (3) | −0.0034 (3) | −0.0052 (3) |
| Ni1—N1i | 2.0564 (10) | C2—H2B | 0.9700 |
| Ni1—N1 | 2.0565 (10) | C3—H3A | 0.9700 |
| Ni1—N2 | 2.0699 (10) | C3—H3B | 0.9700 |
| Ni1—N2i | 2.0699 (10) | C4—C5i | 1.5153 (18) |
| Ni1—O1W | 2.1478 (9) | C4—H4A | 0.9700 |
| Ni1—O1Wi | 2.1478 (9) | C4—H4B | 0.9700 |
| O1W—H1W1 | 0.8499 | C5—C4i | 1.5153 (18) |
| O1W—H2W1 | 0.8506 | C5—H5A | 0.9700 |
| N1—C5 | 1.4747 (16) | C5—H5B | 0.9700 |
| N1—C1 | 1.4772 (17) | O1—C11 | 1.2496 (14) |
| N1—H1N1 | 0.88 (2) | O2—C11 | 1.2615 (14) |
| N2—C3 | 1.4745 (16) | C11—C12 | 1.5007 (16) |
| N2—C4 | 1.4761 (16) | C12—C12ii | 1.330 (2) |
| N2—H1N2 | 0.90 (2) | C12—H12A | 0.9300 |
| C1—C2 | 1.5279 (19) | O2W—H1W2 | 0.8501 |
| C1—H1A | 0.9700 | O2W—H2W2 | 0.8496 |
| C1—H1B | 0.9700 | O3W—H1W3 | 0.8482 |
| C2—C3 | 1.5253 (19) | O3W—H2W3 | 0.8537 |
| C2—H2A | 0.9700 | ||
| N1i—Ni1—N1 | 180.0 | C2—C1—H1B | 109.2 |
| N1i—Ni1—N2 | 85.49 (4) | H1A—C1—H1B | 107.9 |
| N1—Ni1—N2 | 94.51 (4) | C3—C2—C1 | 115.74 (11) |
| N1i—Ni1—N2i | 94.51 (4) | C3—C2—H2A | 108.3 |
| N1—Ni1—N2i | 85.49 (4) | C1—C2—H2A | 108.3 |
| N2—Ni1—N2i | 179.999 (1) | C3—C2—H2B | 108.3 |
| N1i—Ni1—O1W | 91.94 (4) | C1—C2—H2B | 108.3 |
| N1—Ni1—O1W | 88.06 (4) | H2A—C2—H2B | 107.4 |
| N2—Ni1—O1W | 88.73 (4) | N2—C3—C2 | 111.79 (10) |
| N2i—Ni1—O1W | 91.27 (4) | N2—C3—H3A | 109.3 |
| N1i—Ni1—O1Wi | 88.06 (4) | C2—C3—H3A | 109.3 |
| N1—Ni1—O1Wi | 91.94 (4) | N2—C3—H3B | 109.3 |
| N2—Ni1—O1Wi | 91.27 (4) | C2—C3—H3B | 109.3 |
| N2i—Ni1—O1Wi | 88.73 (4) | H3A—C3—H3B | 107.9 |
| O1W—Ni1—O1Wi | 180.0 | N2—C4—C5i | 109.50 (10) |
| Ni1—O1W—H1W1 | 165.2 | N2—C4—H4A | 109.8 |
| Ni1—O1W—H2W1 | 77.0 | C5i—C4—H4A | 109.8 |
| H1W1—O1W—H2W1 | 107.7 | N2—C4—H4B | 109.8 |
| C5—N1—C1 | 113.05 (9) | C5i—C4—H4B | 109.8 |
| C5—N1—Ni1 | 106.83 (7) | H4A—C4—H4B | 108.2 |
| C1—N1—Ni1 | 116.66 (8) | N1—C5—C4i | 109.30 (9) |
| C5—N1—H1N1 | 112.6 (16) | N1—C5—H5A | 109.8 |
| C1—N1—H1N1 | 108.2 (16) | C4i—C5—H5A | 109.8 |
| Ni1—N1—H1N1 | 98.8 (16) | N1—C5—H5B | 109.8 |
| C3—N2—C4 | 112.55 (10) | C4i—C5—H5B | 109.8 |
| C3—N2—Ni1 | 114.93 (8) | H5A—C5—H5B | 108.3 |
| C4—N2—Ni1 | 105.98 (7) | O1—C11—O2 | 124.55 (11) |
| C3—N2—H1N2 | 109.8 (15) | O1—C11—C12 | 119.64 (10) |
| C4—N2—H1N2 | 105.3 (14) | O2—C11—C12 | 115.81 (10) |
| Ni1—N2—H1N2 | 107.8 (15) | C12ii—C12—C11 | 123.39 (13) |
| N1—C1—C2 | 111.84 (10) | C12ii—C12—H12A | 118.3 |
| N1—C1—H1A | 109.2 | C11—C12—H12A | 118.3 |
| C2—C1—H1A | 109.2 | H1W2—O2W—H2W2 | 107.7 |
| N1—C1—H1B | 109.2 | H1W3—O3W—H2W3 | 107.5 |
| N2—Ni1—N1—C5 | −166.65 (8) | O1W—Ni1—N2—C4 | −106.83 (7) |
| N2i—Ni1—N1—C5 | 13.35 (8) | O1Wi—Ni1—N2—C4 | 73.17 (7) |
| O1W—Ni1—N1—C5 | 104.78 (8) | C5—N1—C1—C2 | 179.36 (10) |
| O1Wi—Ni1—N1—C5 | −75.22 (8) | Ni1—N1—C1—C2 | 54.91 (12) |
| N2—Ni1—N1—C1 | −39.09 (9) | N1—C1—C2—C3 | −69.36 (15) |
| N2i—Ni1—N1—C1 | 140.91 (9) | C4—N2—C3—C2 | −179.50 (10) |
| O1W—Ni1—N1—C1 | −127.66 (8) | Ni1—N2—C3—C2 | −58.06 (12) |
| O1Wi—Ni1—N1—C1 | 52.34 (8) | C1—C2—C3—N2 | 71.78 (14) |
| N1i—Ni1—N2—C3 | −139.74 (9) | C3—N2—C4—C5i | 166.48 (10) |
| N1—Ni1—N2—C3 | 40.26 (9) | Ni1—N2—C4—C5i | 40.06 (11) |
| O1W—Ni1—N2—C3 | 128.21 (9) | C1—N1—C5—C4i | −168.52 (10) |
| O1Wi—Ni1—N2—C3 | −51.79 (9) | Ni1—N1—C5—C4i | −38.86 (11) |
| N1i—Ni1—N2—C4 | −14.78 (7) | O1—C11—C12—C12ii | 11.2 (2) |
| N1—Ni1—N2—C4 | 165.22 (7) | O2—C11—C12—C12ii | −168.24 (16) |
| H··· | ||||
| O1W—H1W1···O3W | 0.85 | 2.17 | 2.8047 (14) | 131 |
| O2W—H1W2···O2iii | 0.85 | 1.98 | 2.7026 (14) | 142 |
| O2W—H2W2···O2ii | 0.85 | 1.91 | 2.7000 (15) | 154 |
| O3W—H1W3···O1iv | 0.85 | 1.96 | 2.7633 (14) | 157 |
| O3W—H2W3···O1 | 0.85 | 2.06 | 2.7968 (14) | 144 |
| N1—H1N1···O2Wv | 0.88 (2) | 2.19 (2) | 3.0153 (15) | 154 (2) |
| N2—H1N2···O3Wv | 0.90 (2) | 2.25 (2) | 3.0769 (15) | 153 (2) |
| C3—H3B···O1i | 0.97 | 2.60 | 3.3850 (18) | 138 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1 | 0.85 | 2.17 | 2.8047 (14) | 131 |
| O2 | 0.85 | 1.98 | 2.7026 (14) | 142 |
| O2 | 0.85 | 1.91 | 2.7000 (15) | 154 |
| O3 | 0.85 | 1.96 | 2.7633 (14) | 157 |
| O3 | 0.85 | 2.06 | 2.7968 (14) | 144 |
| N1—H1 | 0.88 (2) | 2.19 (2) | 3.0153 (15) | 154 (2) |
| N2—H1 | 0.90 (2) | 2.25 (2) | 3.0769 (15) | 153 (2) |
| C3—H3 | 0.97 | 2.60 | 3.3850 (18) | 138 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .