Literature DB >> 21587642

2-{[(E)-1,3-Benzodioxol-5-yl]methyl-idene-amino}-benzoic acid.

M Nawaz Tahir, Hazoor Ahmad Shad, Muhammad Naeem Khan, Muhammad Ilyas Tariq.   

Abstract

In the title compound, C(15)H(11)NO(4), the dihedral angle between the aromatic rings is 23.8 (2)° and an intra-molecular O-H⋯N hydrogen bond generates an S(6) ring. In the crystal, C-H⋯O hydrogen bonds link the mol-ecules into a three-dimensional network.

Entities:  

Year:  2010        PMID: 21587642      PMCID: PMC2983421          DOI: 10.1107/S1600536810038420

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a related structure, see: Yang et al. (2007 ▶). For graph-set notation, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C15H11NO4 M = 269.25 Orthorhombic, a = 22.884 (2) Å b = 3.9402 (4) Å c = 13.5696 (13) Å V = 1223.5 (2) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 296 K 0.28 × 0.14 × 0.10 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.980, T max = 0.988 28104 measured reflections 1152 independent reflections 925 reflections with I > 2σ(I) R int = 0.079

Refinement

R[F 2 > 2σ(F 2)] = 0.049 wR(F 2) = 0.122 S = 1.12 1152 reflections 184 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.18 e Å−3 Δρmin = −0.21 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810038420/hb5653sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810038420/hb5653Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H11NO4F(000) = 560
Mr = 269.25Dx = 1.462 Mg m3
Orthorhombic, Pna21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2c -2nCell parameters from 925 reflections
a = 22.884 (2) Åθ = 2.3–25.2°
b = 3.9402 (4) ŵ = 0.11 mm1
c = 13.5696 (13) ÅT = 296 K
V = 1223.5 (2) Å3Needle, orange yellow
Z = 40.28 × 0.14 × 0.10 mm
Bruker Kappa APEXII CCD diffractometer1152 independent reflections
Radiation source: fine-focus sealed tube925 reflections with I > 2σ(I)
graphiteRint = 0.079
Detector resolution: 8.20 pixels mm-1θmax = 25.2°, θmin = 2.3°
ω scansh = −27→27
Absorption correction: multi-scan (SADABS; Bruker, 2005)k = −4→4
Tmin = 0.980, Tmax = 0.988l = −16→16
28104 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.049Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.122H atoms treated by a mixture of independent and constrained refinement
S = 1.12w = 1/[σ2(Fo2) + (0.0704P)2 + 0.1607P] where P = (Fo2 + 2Fc2)/3
1152 reflections(Δ/σ)max < 0.001
184 parametersΔρmax = 0.18 e Å3
1 restraintΔρmin = −0.21 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.51893 (16)0.1333 (11)0.1270 (2)0.0783 (14)
O20.60847 (16)0.3309 (12)0.1082 (3)0.0870 (16)
O30.28294 (13)−0.2221 (9)0.0939 (2)0.0644 (11)
O40.22350 (12)−0.5110 (9)0.2031 (3)0.0615 (11)
N10.47183 (15)0.1225 (8)0.2968 (3)0.0477 (11)
C10.5677 (2)0.2642 (12)0.1623 (3)0.0597 (17)
C20.56974 (18)0.3361 (10)0.2714 (3)0.0453 (12)
C30.62059 (19)0.4809 (11)0.3079 (4)0.0557 (16)
C40.6268 (2)0.5551 (12)0.4064 (4)0.0603 (17)
C50.5811 (2)0.4898 (11)0.4697 (4)0.0613 (17)
C60.53019 (19)0.3494 (11)0.4360 (3)0.0550 (16)
C70.52366 (16)0.2630 (10)0.3363 (3)0.0427 (12)
C80.43348 (17)−0.0263 (9)0.3505 (3)0.0487 (12)
C90.37893 (17)−0.1565 (9)0.3122 (3)0.0453 (12)
C100.36230 (17)−0.1111 (11)0.2122 (3)0.0480 (12)
C110.30981 (17)−0.2372 (11)0.1848 (3)0.0463 (12)
C120.27312 (17)−0.4075 (11)0.2501 (3)0.0477 (14)
C130.28753 (18)−0.4521 (11)0.3468 (4)0.0520 (14)
C140.34183 (19)−0.3234 (11)0.3770 (3)0.0520 (14)
C150.2282 (2)−0.3962 (14)0.1039 (4)0.0650 (17)
H10.491 (3)0.140 (15)0.166 (5)0.0937*
H30.651120.528800.264870.0668*
H40.661400.648310.430000.0722*
H50.584890.541760.536240.0734*
H60.499570.310780.479610.0655*
H80.44114−0.051850.417340.0582*
H100.386440.000510.167630.0575*
H130.26261−0.562290.390430.0623*
H140.35328−0.350790.442310.0623*
H15A0.19620−0.244110.088410.0780*
H15B0.22671−0.587490.059020.0780*
U11U22U33U12U13U23
O10.071 (2)0.130 (3)0.034 (2)−0.009 (2)−0.0057 (16)−0.008 (2)
O20.074 (2)0.143 (4)0.044 (2)−0.012 (2)0.0141 (19)−0.003 (2)
O30.0587 (18)0.094 (2)0.0405 (18)−0.0102 (18)−0.0039 (15)0.0052 (17)
O40.0574 (17)0.080 (2)0.047 (2)−0.0098 (16)−0.0032 (15)0.0034 (18)
N10.0472 (19)0.055 (2)0.041 (2)0.0002 (16)0.0019 (17)0.0018 (17)
C10.055 (3)0.079 (3)0.045 (3)0.000 (2)−0.002 (2)0.004 (2)
C20.052 (2)0.049 (2)0.035 (2)0.0056 (19)0.0013 (18)0.0029 (18)
C30.053 (2)0.065 (3)0.049 (3)−0.002 (2)0.002 (2)−0.001 (2)
C40.057 (3)0.068 (3)0.056 (3)−0.007 (2)−0.011 (2)−0.002 (2)
C50.079 (3)0.062 (3)0.043 (3)−0.008 (3)−0.007 (3)−0.008 (2)
C60.063 (3)0.059 (2)0.043 (3)−0.003 (2)0.004 (2)−0.002 (2)
C70.048 (2)0.044 (2)0.036 (2)0.0044 (18)−0.0005 (18)0.0011 (16)
C80.055 (2)0.049 (2)0.042 (2)0.007 (2)0.000 (2)0.002 (2)
C90.048 (2)0.047 (2)0.041 (2)0.0048 (18)0.0014 (19)0.0020 (18)
C100.050 (2)0.054 (2)0.040 (2)0.0019 (19)0.006 (2)0.0058 (19)
C110.052 (2)0.054 (2)0.033 (2)0.009 (2)0.0016 (19)−0.0006 (19)
C120.045 (2)0.055 (2)0.043 (3)−0.0001 (19)0.0020 (19)−0.001 (2)
C130.056 (2)0.055 (2)0.045 (3)0.000 (2)0.006 (2)0.006 (2)
C140.056 (2)0.054 (2)0.046 (3)0.008 (2)0.006 (2)0.010 (2)
C150.067 (3)0.082 (3)0.046 (3)−0.003 (3)−0.005 (2)0.006 (2)
O1—C11.320 (6)C9—C141.388 (6)
O2—C11.216 (6)C9—C101.421 (6)
O3—C111.380 (5)C10—C111.352 (6)
O3—C151.435 (6)C11—C121.393 (6)
O4—C121.365 (5)C12—C131.364 (7)
O4—C151.424 (7)C13—C141.403 (6)
O1—H10.83 (7)C3—H30.9300
N1—C71.414 (5)C4—H40.9300
N1—C81.283 (5)C5—H50.9300
C1—C21.508 (6)C6—H60.9300
C2—C71.404 (6)C8—H80.9300
C2—C31.387 (6)C10—H100.9300
C3—C41.376 (8)C13—H130.9300
C4—C51.378 (7)C14—H140.9300
C5—C61.368 (6)C15—H15A0.9700
C6—C71.403 (6)C15—H15B0.9700
C8—C91.446 (5)
C11—O3—C15106.5 (3)C11—C12—C13121.9 (4)
C12—O4—C15106.5 (3)O4—C12—C11110.4 (4)
C1—O1—H1114 (5)C12—C13—C14116.6 (4)
C7—N1—C8122.5 (4)C9—C14—C13121.9 (4)
O1—C1—O2121.0 (4)O3—C15—O4107.9 (4)
O1—C1—C2117.1 (4)C2—C3—H3119.00
O2—C1—C2121.9 (4)C4—C3—H3119.00
C1—C2—C3117.0 (4)C3—C4—H4120.00
C1—C2—C7123.7 (4)C5—C4—H4120.00
C3—C2—C7119.4 (4)C4—C5—H5120.00
C2—C3—C4121.4 (4)C6—C5—H5120.00
C3—C4—C5119.2 (4)C5—C6—H6120.00
C4—C5—C6120.9 (5)C7—C6—H6120.00
C5—C6—C7120.7 (4)N1—C8—H8118.00
N1—C7—C2118.2 (4)C9—C8—H8118.00
N1—C7—C6123.4 (4)C9—C10—H10121.00
C2—C7—C6118.4 (4)C11—C10—H10122.00
N1—C8—C9123.3 (4)C12—C13—H13122.00
C8—C9—C14117.9 (4)C14—C13—H13122.00
C10—C9—C14120.1 (4)C9—C14—H14119.00
C8—C9—C10122.0 (4)C13—C14—H14119.00
C9—C10—C11117.0 (4)O3—C15—H15A110.00
O3—C11—C10128.8 (4)O3—C15—H15B110.00
O3—C11—C12108.7 (3)O4—C15—H15A110.00
C10—C11—C12122.5 (4)O4—C15—H15B110.00
O4—C12—C13127.7 (4)H15A—C15—H15B109.00
C15—O3—C11—C10179.6 (5)C3—C4—C5—C60.7 (7)
C15—O3—C11—C12−1.2 (5)C4—C5—C6—C71.1 (7)
C11—O3—C15—O40.5 (5)C5—C6—C7—N1−178.9 (4)
C15—O4—C12—C11−1.1 (5)C5—C6—C7—C2−2.4 (6)
C15—O4—C12—C13178.3 (5)N1—C8—C9—C10−3.7 (6)
C12—O4—C15—O30.4 (5)N1—C8—C9—C14177.8 (4)
C8—N1—C7—C2162.9 (4)C8—C9—C10—C11−178.7 (4)
C8—N1—C7—C6−20.6 (6)C14—C9—C10—C11−0.2 (6)
C7—N1—C8—C9176.8 (3)C8—C9—C14—C13178.7 (4)
O1—C1—C2—C3−178.6 (4)C10—C9—C14—C130.2 (6)
O1—C1—C2—C71.8 (6)C9—C10—C11—O3178.6 (4)
O2—C1—C2—C3−0.4 (7)C9—C10—C11—C12−0.5 (6)
O2—C1—C2—C7−180.0 (5)O3—C11—C12—O41.5 (5)
C1—C2—C3—C4−179.8 (4)O3—C11—C12—C13−178.0 (4)
C7—C2—C3—C4−0.1 (6)C10—C11—C12—O4−179.3 (4)
C1—C2—C7—N1−1.8 (6)C10—C11—C12—C131.3 (7)
C1—C2—C7—C6−178.5 (4)O4—C12—C13—C14179.4 (4)
C3—C2—C7—N1178.6 (4)C11—C12—C13—C14−1.2 (6)
C3—C2—C7—C61.9 (6)C12—C13—C14—C90.5 (6)
C2—C3—C4—C5−1.2 (7)
D—H···AD—HH···AD···AD—H···A
O1—H1···N10.83 (7)1.83 (7)2.544 (5)143 (7)
C14—H14···O2i0.932.423.337 (6)170
C15—H15A···O2ii0.972.603.532 (6)162
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯N10.83 (7)1.83 (7)2.544 (5)143 (7)
C14—H14⋯O2i0.932.423.337 (6)170
C15—H15A⋯O2ii0.972.603.532 (6)162

Symmetry codes: (i) ; (ii) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  2 in total
  3 in total

1.  N-[(E)-1,3-Benzodioxol-5-yl-methyl-idene]-4-methyl-aniline.

Authors:  M Nawaz Tahir; Hazoor Ahmad Shad; Muhammad Naeem Khan; Riaz H Tariq
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-11-24

2.  5-[(E)-(2-Fluoro-benzyl-idene)amino]-2-hy-droxy-benzoic acid.

Authors:  M Nawaz Tahir; Muhammad Ilyas Tariq; Riaz H Tariq
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-08-17

3.  Crystal structure of N-[(E)-(1,3-benzodioxol-5-yl)-methyl-idene]-4-chloro-aniline.

Authors:  J Pablo García-Merinos; Yliana López; J Betzabe González-Campos; Judit A Aviña-Verduzco; Rosa E Del Río; Rosa Santillan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-10-24
  3 in total

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