| Literature DB >> 21587616 |
Abstract
In the title compound, C(17)H(18)N(4)O(3)·C(3)H(7)NO, the main disubstituted urea and solvate mol-ecules are linked by pairs of N-H⋯O hydrogen bonds. In the main mol-ecules, the benzene rings form a dihedral angle of 15.59 (13)° a;nd two intra-molecular O-H⋯N hydrogen bonds influence the mol-ecular conformation. In the crystal structure, weak inter-molecular C-H⋯O inter-actions link the hydrogen-bonded pairs into chains along the b axis. The chains associate via C-H⋯π inter-actions.Entities:
Year: 2010 PMID: 21587616 PMCID: PMC2983342 DOI: 10.1107/S1600536810037517
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C17H18N4O3·C3H7NO | |
| Monoclinic, | Mo |
| Cell parameters from 1764 reflections | |
| θ = 2.5–21.7° | |
| µ = 0.09 mm−1 | |
| β = 94.472 (1)° | |
| Block, colourless | |
| 0.47 × 0.46 × 0.23 mm |
| Bruker SMART APEX CCD area-detector diffractometer | 3596 independent reflections |
| Radiation source: fine-focus sealed tube | 1712 reflections with |
| graphite | |
| phi and ω scans | θmax = 25.0°, θmin = 2.5° |
| Absorption correction: multi-scan ( | |
| 10277 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 3596 reflections | Δρmax = 0.22 e Å−3 |
| 263 parameters | Δρmin = −0.17 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0049 (10) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| N1 | 0.15121 (15) | 0.6195 (3) | 0.48890 (15) | 0.0541 (7) | |
| H1 | 0.1563 | 0.6254 | 0.5417 | 0.065* | |
| N2 | 0.08378 (15) | 0.6805 (3) | 0.44431 (15) | 0.0491 (7) | |
| N3 | 0.27455 (15) | 0.4912 (4) | 0.49563 (15) | 0.0555 (8) | |
| H3 | 0.2756 | 0.5015 | 0.5483 | 0.067* | |
| N4 | 0.33674 (15) | 0.4171 (3) | 0.45841 (15) | 0.0510 (7) | |
| N5 | 0.23936 (17) | 0.5436 (4) | 0.78637 (16) | 0.0602 (8) | |
| O1 | 0.20609 (13) | 0.5357 (3) | 0.37093 (14) | 0.0717 (8) | |
| O2 | 0.02424 (14) | 0.7754 (4) | 0.30242 (13) | 0.0772 (8) | |
| H2A | 0.0592 | 0.7362 | 0.3357 | 0.116* | |
| O3 | 0.38946 (14) | 0.3282 (4) | 0.32185 (14) | 0.0826 (8) | |
| H3A | 0.3577 | 0.3729 | 0.3518 | 0.124* | |
| O4 | 0.22303 (16) | 0.6047 (4) | 0.65032 (15) | 0.0825 (9) | |
| C1 | 0.20997 (19) | 0.5488 (4) | 0.4450 (2) | 0.0511 (9) | |
| C2 | 0.0191 (2) | 0.7253 (5) | 0.57328 (18) | 0.0606 (10) | |
| H2B | 0.0483 | 0.6243 | 0.5950 | 0.091* | |
| H2C | −0.0361 | 0.7172 | 0.5863 | 0.091* | |
| H2D | 0.0428 | 0.8305 | 0.5973 | 0.091* | |
| C3 | 0.02260 (19) | 0.7313 (4) | 0.48137 (18) | 0.0445 (8) | |
| C4 | −0.04633 (18) | 0.7964 (4) | 0.42688 (19) | 0.0455 (8) | |
| C5 | −0.04176 (19) | 0.8178 (4) | 0.3417 (2) | 0.0516 (9) | |
| C6 | −0.1065 (2) | 0.8871 (5) | 0.2935 (2) | 0.0620 (10) | |
| H6 | −0.1023 | 0.9033 | 0.2374 | 0.074* | |
| C7 | −0.1762 (2) | 0.9319 (5) | 0.3270 (2) | 0.0706 (11) | |
| H7 | −0.2193 | 0.9779 | 0.2940 | 0.085* | |
| C8 | −0.1824 (2) | 0.9086 (5) | 0.4098 (3) | 0.0792 (12) | |
| H8 | −0.2299 | 0.9381 | 0.4330 | 0.095* | |
| C9 | −0.1183 (2) | 0.8417 (5) | 0.4584 (2) | 0.0634 (10) | |
| H9 | −0.1235 | 0.8264 | 0.5143 | 0.076* | |
| C10 | 0.40492 (19) | 0.3582 (5) | 0.59426 (19) | 0.0617 (10) | |
| H10A | 0.4233 | 0.4721 | 0.6132 | 0.093* | |
| H10B | 0.4426 | 0.2699 | 0.6148 | 0.093* | |
| H10C | 0.3531 | 0.3346 | 0.6139 | 0.093* | |
| C11 | 0.39830 (18) | 0.3552 (4) | 0.50206 (19) | 0.0470 (8) | |
| C12 | 0.46219 (18) | 0.2798 (4) | 0.4551 (2) | 0.0485 (8) | |
| C13 | 0.4547 (2) | 0.2668 (5) | 0.3684 (2) | 0.0588 (9) | |
| C14 | 0.5149 (2) | 0.1875 (5) | 0.3275 (2) | 0.0756 (12) | |
| H14 | 0.5082 | 0.1747 | 0.2706 | 0.091* | |
| C15 | 0.5839 (2) | 0.1277 (5) | 0.3690 (3) | 0.0799 (12) | |
| H15 | 0.6244 | 0.0772 | 0.3404 | 0.096* | |
| C16 | 0.5933 (2) | 0.1423 (5) | 0.4528 (3) | 0.0738 (11) | |
| H16 | 0.6404 | 0.1021 | 0.4813 | 0.089* | |
| C17 | 0.5336 (2) | 0.2159 (4) | 0.4947 (2) | 0.0610 (10) | |
| H17 | 0.5410 | 0.2237 | 0.5517 | 0.073* | |
| C18 | 0.1982 (2) | 0.5477 (5) | 0.7144 (2) | 0.0700 (11) | |
| H18 | 0.1458 | 0.5041 | 0.7116 | 0.084* | |
| C19 | 0.3198 (2) | 0.6151 (6) | 0.7959 (2) | 0.0948 (14) | |
| H19A | 0.3380 | 0.6399 | 0.7427 | 0.142* | |
| H19B | 0.3553 | 0.5311 | 0.8239 | 0.142* | |
| H19C | 0.3195 | 0.7218 | 0.8275 | 0.142* | |
| C20 | 0.2055 (2) | 0.4702 (6) | 0.8576 (2) | 0.0931 (14) | |
| H20A | 0.1503 | 0.4381 | 0.8436 | 0.140* | |
| H20B | 0.2080 | 0.5561 | 0.9010 | 0.140* | |
| H20C | 0.2356 | 0.3676 | 0.8757 | 0.140* |
| N1 | 0.0494 (16) | 0.072 (2) | 0.0391 (15) | 0.0127 (15) | −0.0055 (13) | −0.0015 (14) |
| N2 | 0.0449 (16) | 0.0560 (18) | 0.0448 (16) | 0.0048 (14) | −0.0071 (14) | −0.0012 (13) |
| N3 | 0.0466 (16) | 0.077 (2) | 0.0421 (15) | 0.0101 (15) | −0.0048 (13) | −0.0037 (15) |
| N4 | 0.0432 (15) | 0.0593 (18) | 0.0493 (17) | 0.0022 (14) | −0.0032 (13) | −0.0033 (14) |
| N5 | 0.0661 (19) | 0.073 (2) | 0.0406 (17) | 0.0032 (17) | 0.0014 (15) | 0.0090 (15) |
| O1 | 0.0632 (15) | 0.106 (2) | 0.0436 (15) | 0.0167 (14) | −0.0101 (12) | −0.0117 (14) |
| O2 | 0.0669 (16) | 0.117 (2) | 0.0473 (14) | 0.0275 (15) | 0.0014 (13) | 0.0008 (14) |
| O3 | 0.0693 (17) | 0.125 (2) | 0.0517 (15) | 0.0146 (16) | −0.0044 (13) | −0.0063 (15) |
| O4 | 0.099 (2) | 0.107 (2) | 0.0418 (15) | 0.0096 (17) | 0.0026 (14) | 0.0109 (15) |
| C1 | 0.0455 (19) | 0.058 (2) | 0.048 (2) | −0.0022 (17) | −0.0055 (17) | −0.0060 (18) |
| C2 | 0.064 (2) | 0.068 (2) | 0.049 (2) | 0.0049 (19) | −0.0020 (17) | 0.0008 (18) |
| C3 | 0.049 (2) | 0.042 (2) | 0.0421 (19) | −0.0037 (16) | −0.0026 (16) | −0.0045 (15) |
| C4 | 0.0480 (19) | 0.0426 (19) | 0.045 (2) | 0.0011 (16) | −0.0012 (16) | −0.0055 (16) |
| C5 | 0.051 (2) | 0.058 (2) | 0.044 (2) | 0.0062 (17) | −0.0033 (17) | −0.0065 (17) |
| C6 | 0.067 (2) | 0.068 (3) | 0.048 (2) | 0.007 (2) | −0.0143 (19) | −0.0001 (18) |
| C7 | 0.058 (2) | 0.081 (3) | 0.070 (3) | 0.019 (2) | −0.015 (2) | −0.005 (2) |
| C8 | 0.053 (2) | 0.103 (3) | 0.080 (3) | 0.022 (2) | 0.004 (2) | −0.006 (3) |
| C9 | 0.057 (2) | 0.078 (3) | 0.055 (2) | 0.011 (2) | 0.0026 (19) | −0.001 (2) |
| C10 | 0.061 (2) | 0.070 (2) | 0.053 (2) | 0.0082 (19) | −0.0060 (17) | 0.0022 (19) |
| C11 | 0.0440 (19) | 0.047 (2) | 0.049 (2) | −0.0037 (16) | −0.0047 (16) | −0.0020 (16) |
| C12 | 0.045 (2) | 0.046 (2) | 0.054 (2) | −0.0063 (16) | −0.0020 (17) | 0.0011 (17) |
| C13 | 0.053 (2) | 0.065 (2) | 0.057 (2) | −0.0051 (19) | −0.0014 (19) | −0.0055 (19) |
| C14 | 0.070 (3) | 0.093 (3) | 0.066 (3) | −0.004 (2) | 0.017 (2) | −0.012 (2) |
| C15 | 0.068 (3) | 0.074 (3) | 0.101 (4) | 0.006 (2) | 0.028 (3) | −0.004 (3) |
| C16 | 0.055 (2) | 0.072 (3) | 0.094 (3) | 0.012 (2) | 0.004 (2) | 0.011 (2) |
| C17 | 0.055 (2) | 0.058 (2) | 0.070 (2) | 0.0031 (19) | −0.001 (2) | 0.0056 (19) |
| C18 | 0.070 (3) | 0.075 (3) | 0.064 (3) | 0.000 (2) | −0.001 (2) | −0.001 (2) |
| C19 | 0.072 (3) | 0.132 (4) | 0.078 (3) | −0.003 (3) | −0.009 (2) | 0.010 (3) |
| C20 | 0.116 (3) | 0.100 (3) | 0.066 (3) | 0.013 (3) | 0.024 (3) | 0.025 (2) |
| N1—C1 | 1.365 (4) | C7—C8 | 1.372 (5) |
| N1—N2 | 1.369 (3) | C7—H7 | 0.9300 |
| N1—H1 | 0.8600 | C8—C9 | 1.375 (5) |
| N2—C3 | 1.283 (4) | C8—H8 | 0.9302 |
| N3—N4 | 1.361 (3) | C9—H9 | 0.9300 |
| N3—C1 | 1.374 (4) | C10—C11 | 1.498 (4) |
| N3—H3 | 0.8600 | C10—H10A | 0.9600 |
| N4—C11 | 1.289 (4) | C10—H10B | 0.9600 |
| N5—C18 | 1.311 (4) | C10—H10C | 0.9600 |
| N5—C19 | 1.440 (4) | C11—C12 | 1.473 (4) |
| N5—C20 | 1.441 (4) | C12—C17 | 1.394 (4) |
| O1—C1 | 1.208 (3) | C12—C13 | 1.411 (4) |
| O2—C5 | 1.352 (3) | C13—C14 | 1.384 (5) |
| O2—H2A | 0.8200 | C14—C15 | 1.364 (5) |
| O3—C13 | 1.358 (4) | C14—H14 | 0.9300 |
| O3—H3A | 0.8200 | C15—C16 | 1.367 (5) |
| O4—C18 | 1.232 (4) | C15—H15 | 0.9299 |
| C2—C3 | 1.504 (4) | C16—C17 | 1.368 (5) |
| C2—H2B | 0.9600 | C16—H16 | 0.9300 |
| C2—H2C | 0.9600 | C17—H17 | 0.9300 |
| C2—H2D | 0.9600 | C18—H18 | 0.9300 |
| C3—C4 | 1.480 (4) | C19—H19A | 0.9600 |
| C4—C9 | 1.382 (4) | C19—H19B | 0.9600 |
| C4—C5 | 1.405 (4) | C19—H19C | 0.9600 |
| C5—C6 | 1.387 (4) | C20—H20A | 0.9600 |
| C6—C7 | 1.363 (5) | C20—H20B | 0.9600 |
| C6—H6 | 0.9300 | C20—H20C | 0.9600 |
| C1—N1—N2 | 116.4 (3) | C11—C10—H10A | 109.5 |
| C1—N1—H1 | 121.8 | C11—C10—H10B | 109.5 |
| N2—N1—H1 | 121.8 | H10A—C10—H10B | 109.5 |
| C3—N2—N1 | 120.0 (3) | C11—C10—H10C | 109.5 |
| N4—N3—C1 | 116.7 (3) | H10A—C10—H10C | 109.5 |
| N4—N3—H3 | 121.6 | H10B—C10—H10C | 109.5 |
| C1—N3—H3 | 121.6 | N4—C11—C12 | 115.4 (3) |
| C11—N4—N3 | 120.2 (3) | N4—C11—C10 | 122.7 (3) |
| C18—N5—C19 | 120.2 (3) | C12—C11—C10 | 121.8 (3) |
| C18—N5—C20 | 121.3 (3) | C17—C12—C13 | 116.4 (3) |
| C19—N5—C20 | 118.5 (3) | C17—C12—C11 | 121.2 (3) |
| C5—O2—H2A | 109.5 | C13—C12—C11 | 122.4 (3) |
| C13—O3—H3A | 109.5 | O3—C13—C14 | 117.2 (3) |
| O1—C1—N1 | 124.8 (3) | O3—C13—C12 | 122.7 (3) |
| O1—C1—N3 | 123.5 (3) | C14—C13—C12 | 120.1 (3) |
| N1—C1—N3 | 111.6 (3) | C15—C14—C13 | 121.2 (4) |
| C3—C2—H2B | 109.5 | C15—C14—H14 | 119.4 |
| C3—C2—H2C | 109.5 | C13—C14—H14 | 119.4 |
| H2B—C2—H2C | 109.5 | C14—C15—C16 | 119.7 (4) |
| C3—C2—H2D | 109.5 | C14—C15—CG1 | 59.7 (2) |
| H2B—C2—H2D | 109.5 | C14—C15—H15 | 120.2 |
| H2C—C2—H2D | 109.5 | C16—C15—H15 | 120.2 |
| N2—C3—C4 | 115.1 (3) | C15—C16—C17 | 120.0 (4) |
| N2—C3—C2 | 123.6 (3) | C15—C16—H16 | 120.0 |
| C4—C3—C2 | 121.3 (3) | C17—C16—H16 | 120.0 |
| C9—C4—C5 | 116.9 (3) | C16—C17—C12 | 122.5 (4) |
| C9—C4—C3 | 120.9 (3) | C16—C17—H17 | 118.8 |
| C5—C4—C3 | 122.2 (3) | C12—C17—H17 | 118.8 |
| O2—C5—C6 | 116.4 (3) | O4—C18—N5 | 125.4 (4) |
| O2—C5—C4 | 123.3 (3) | O4—C18—H18 | 117.3 |
| C6—C5—C4 | 120.3 (3) | N5—C18—H18 | 117.3 |
| C7—C6—C5 | 121.0 (3) | N5—C19—H19A | 109.5 |
| C7—C6—H6 | 119.5 | N5—C19—H19B | 109.5 |
| C5—C6—H6 | 119.5 | H19A—C19—H19B | 109.5 |
| C6—C7—C8 | 119.6 (3) | N5—C19—H19C | 109.5 |
| C6—C7—H7 | 120.2 | H19A—C19—H19C | 109.5 |
| C8—C7—H7 | 120.2 | H19B—C19—H19C | 109.5 |
| C7—C8—C9 | 120.0 (4) | N5—C20—H20A | 109.5 |
| C7—C8—H8 | 120.0 | N5—C20—H20B | 109.5 |
| C9—C8—H8 | 120.0 | H20A—C20—H20B | 109.5 |
| C8—C9—C4 | 122.2 (3) | N5—C20—H20C | 109.5 |
| C8—C9—H9 | 118.9 | H20A—C20—H20C | 109.5 |
| C4—C9—H9 | 118.9 | H20B—C20—H20C | 109.5 |
| Cg is the centroid of the C12–C17 ring. |
| H··· | ||||
| N1—H1···O4 | 0.86 | 2.02 | 2.805 (3) | 151 |
| N3—H3···O4 | 0.86 | 2.09 | 2.858 (4) | 148 |
| O2—H2A···N2 | 0.82 | 1.83 | 2.548 (3) | 145 |
| O3—H3A···N4 | 0.82 | 1.83 | 2.546 (3) | 145 |
| C6—H6···O1i | 0.93 | 2.57 | 3.241 (4) | 129 |
| C10—H10A···Cgii | 0.96 | 2.66 | 3.536 (4) | 153 |
Hydrogen-bond geometry (Å, °)
Cg is the centroid of the C12–C17 ring.
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯O4 | 0.86 | 2.02 | 2.805 (3) | 151 |
| N3—H3⋯O4 | 0.86 | 2.09 | 2.858 (4) | 148 |
| O2—H2 | 0.82 | 1.83 | 2.548 (3) | 145 |
| O3—H3 | 0.82 | 1.83 | 2.546 (3) | 145 |
| C6—H6⋯O1i | 0.93 | 2.57 | 3.241 (4) | 129 |
| C10—H10 | 0.96 | 2.66 | 3.536 (4) | 153 |
Symmetry codes: (i) ; (ii) .