Literature DB >> 21587616

1,5-Bis-[1-(2-hy-droxy-phen-yl)ethyl-idene]carbonohydrazide dimethyl-formamide monosolvate.

Lingyun Du1, Wenkang Zhang.   

Abstract

In the title compound, C(17)H(18)N(4)O(3)·C(3)H(7)NO, the main disubstituted urea and solvate mol-ecules are linked by pairs of N-H⋯O hydrogen bonds. In the main mol-ecules, the benzene rings form a dihedral angle of 15.59 (13)° a;nd two intra-molecular O-H⋯N hydrogen bonds influence the mol-ecular conformation. In the crystal structure, weak inter-molecular C-H⋯O inter-actions link the hydrogen-bonded pairs into chains along the b axis. The chains associate via C-H⋯π inter-actions.

Entities:  

Year:  2010        PMID: 21587616      PMCID: PMC2983342          DOI: 10.1107/S1600536810037517

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a related structure, see: Zukerman-Schpector et al. (2009 ▶). For the bioactivity of carbonohydrazide derivatives, see: Loncle et al. (2004 ▶); Li et al. (2004 ▶).

Experimental

Crystal data

C17H18N4O3·C3H7NO M = 399.45 Monoclinic, a = 16.6372 (15) Å b = 7.5880 (9) Å c = 16.2967 (14) Å β = 94.472 (1)° V = 2051.1 (4) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 298 K 0.47 × 0.46 × 0.23 mm

Data collection

Bruker SMART APEX CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.958, T max = 0.979 10277 measured reflections 3596 independent reflections 1712 reflections with I > 2σ(I) R int = 0.059

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.165 S = 1.04 3596 reflections 263 parameters H-atom parameters constrained Δρmax = 0.22 e Å−3 Δρmin = −0.17 e Å−3 Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810037517/cv2762sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810037517/cv2762Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H18N4O3·C3H7NOF(000) = 848
Mr = 399.45Dx = 1.294 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 16.6372 (15) ÅCell parameters from 1764 reflections
b = 7.5880 (9) Åθ = 2.5–21.7°
c = 16.2967 (14) ŵ = 0.09 mm1
β = 94.472 (1)°T = 298 K
V = 2051.1 (4) Å3Block, colourless
Z = 40.47 × 0.46 × 0.23 mm
Bruker SMART APEX CCD area-detector diffractometer3596 independent reflections
Radiation source: fine-focus sealed tube1712 reflections with I > 2σ(I)
graphiteRint = 0.059
phi and ω scansθmax = 25.0°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −13→19
Tmin = 0.958, Tmax = 0.979k = −9→9
10277 measured reflectionsl = −19→19
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.051H-atom parameters constrained
wR(F2) = 0.165w = 1/[σ2(Fo2) + (0.0542P)2 + 0.8303P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max < 0.001
3596 reflectionsΔρmax = 0.22 e Å3
263 parametersΔρmin = −0.17 e Å3
0 restraintsExtinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0049 (10)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.15121 (15)0.6195 (3)0.48890 (15)0.0541 (7)
H10.15630.62540.54170.065*
N20.08378 (15)0.6805 (3)0.44431 (15)0.0491 (7)
N30.27455 (15)0.4912 (4)0.49563 (15)0.0555 (8)
H30.27560.50150.54830.067*
N40.33674 (15)0.4171 (3)0.45841 (15)0.0510 (7)
N50.23936 (17)0.5436 (4)0.78637 (16)0.0602 (8)
O10.20609 (13)0.5357 (3)0.37093 (14)0.0717 (8)
O20.02424 (14)0.7754 (4)0.30242 (13)0.0772 (8)
H2A0.05920.73620.33570.116*
O30.38946 (14)0.3282 (4)0.32185 (14)0.0826 (8)
H3A0.35770.37290.35180.124*
O40.22303 (16)0.6047 (4)0.65032 (15)0.0825 (9)
C10.20997 (19)0.5488 (4)0.4450 (2)0.0511 (9)
C20.0191 (2)0.7253 (5)0.57328 (18)0.0606 (10)
H2B0.04830.62430.59500.091*
H2C−0.03610.71720.58630.091*
H2D0.04280.83050.59730.091*
C30.02260 (19)0.7313 (4)0.48137 (18)0.0445 (8)
C4−0.04633 (18)0.7964 (4)0.42688 (19)0.0455 (8)
C5−0.04176 (19)0.8178 (4)0.3417 (2)0.0516 (9)
C6−0.1065 (2)0.8871 (5)0.2935 (2)0.0620 (10)
H6−0.10230.90330.23740.074*
C7−0.1762 (2)0.9319 (5)0.3270 (2)0.0706 (11)
H7−0.21930.97790.29400.085*
C8−0.1824 (2)0.9086 (5)0.4098 (3)0.0792 (12)
H8−0.22990.93810.43300.095*
C9−0.1183 (2)0.8417 (5)0.4584 (2)0.0634 (10)
H9−0.12350.82640.51430.076*
C100.40492 (19)0.3582 (5)0.59426 (19)0.0617 (10)
H10A0.42330.47210.61320.093*
H10B0.44260.26990.61480.093*
H10C0.35310.33460.61390.093*
C110.39830 (18)0.3552 (4)0.50206 (19)0.0470 (8)
C120.46219 (18)0.2798 (4)0.4551 (2)0.0485 (8)
C130.4547 (2)0.2668 (5)0.3684 (2)0.0588 (9)
C140.5149 (2)0.1875 (5)0.3275 (2)0.0756 (12)
H140.50820.17470.27060.091*
C150.5839 (2)0.1277 (5)0.3690 (3)0.0799 (12)
H150.62440.07720.34040.096*
C160.5933 (2)0.1423 (5)0.4528 (3)0.0738 (11)
H160.64040.10210.48130.089*
C170.5336 (2)0.2159 (4)0.4947 (2)0.0610 (10)
H170.54100.22370.55170.073*
C180.1982 (2)0.5477 (5)0.7144 (2)0.0700 (11)
H180.14580.50410.71160.084*
C190.3198 (2)0.6151 (6)0.7959 (2)0.0948 (14)
H19A0.33800.63990.74270.142*
H19B0.35530.53110.82390.142*
H19C0.31950.72180.82750.142*
C200.2055 (2)0.4702 (6)0.8576 (2)0.0931 (14)
H20A0.15030.43810.84360.140*
H20B0.20800.55610.90100.140*
H20C0.23560.36760.87570.140*
U11U22U33U12U13U23
N10.0494 (16)0.072 (2)0.0391 (15)0.0127 (15)−0.0055 (13)−0.0015 (14)
N20.0449 (16)0.0560 (18)0.0448 (16)0.0048 (14)−0.0071 (14)−0.0012 (13)
N30.0466 (16)0.077 (2)0.0421 (15)0.0101 (15)−0.0048 (13)−0.0037 (15)
N40.0432 (15)0.0593 (18)0.0493 (17)0.0022 (14)−0.0032 (13)−0.0033 (14)
N50.0661 (19)0.073 (2)0.0406 (17)0.0032 (17)0.0014 (15)0.0090 (15)
O10.0632 (15)0.106 (2)0.0436 (15)0.0167 (14)−0.0101 (12)−0.0117 (14)
O20.0669 (16)0.117 (2)0.0473 (14)0.0275 (15)0.0014 (13)0.0008 (14)
O30.0693 (17)0.125 (2)0.0517 (15)0.0146 (16)−0.0044 (13)−0.0063 (15)
O40.099 (2)0.107 (2)0.0418 (15)0.0096 (17)0.0026 (14)0.0109 (15)
C10.0455 (19)0.058 (2)0.048 (2)−0.0022 (17)−0.0055 (17)−0.0060 (18)
C20.064 (2)0.068 (2)0.049 (2)0.0049 (19)−0.0020 (17)0.0008 (18)
C30.049 (2)0.042 (2)0.0421 (19)−0.0037 (16)−0.0026 (16)−0.0045 (15)
C40.0480 (19)0.0426 (19)0.045 (2)0.0011 (16)−0.0012 (16)−0.0055 (16)
C50.051 (2)0.058 (2)0.044 (2)0.0062 (17)−0.0033 (17)−0.0065 (17)
C60.067 (2)0.068 (3)0.048 (2)0.007 (2)−0.0143 (19)−0.0001 (18)
C70.058 (2)0.081 (3)0.070 (3)0.019 (2)−0.015 (2)−0.005 (2)
C80.053 (2)0.103 (3)0.080 (3)0.022 (2)0.004 (2)−0.006 (3)
C90.057 (2)0.078 (3)0.055 (2)0.011 (2)0.0026 (19)−0.001 (2)
C100.061 (2)0.070 (2)0.053 (2)0.0082 (19)−0.0060 (17)0.0022 (19)
C110.0440 (19)0.047 (2)0.049 (2)−0.0037 (16)−0.0047 (16)−0.0020 (16)
C120.045 (2)0.046 (2)0.054 (2)−0.0063 (16)−0.0020 (17)0.0011 (17)
C130.053 (2)0.065 (2)0.057 (2)−0.0051 (19)−0.0014 (19)−0.0055 (19)
C140.070 (3)0.093 (3)0.066 (3)−0.004 (2)0.017 (2)−0.012 (2)
C150.068 (3)0.074 (3)0.101 (4)0.006 (2)0.028 (3)−0.004 (3)
C160.055 (2)0.072 (3)0.094 (3)0.012 (2)0.004 (2)0.011 (2)
C170.055 (2)0.058 (2)0.070 (2)0.0031 (19)−0.001 (2)0.0056 (19)
C180.070 (3)0.075 (3)0.064 (3)0.000 (2)−0.001 (2)−0.001 (2)
C190.072 (3)0.132 (4)0.078 (3)−0.003 (3)−0.009 (2)0.010 (3)
C200.116 (3)0.100 (3)0.066 (3)0.013 (3)0.024 (3)0.025 (2)
N1—C11.365 (4)C7—C81.372 (5)
N1—N21.369 (3)C7—H70.9300
N1—H10.8600C8—C91.375 (5)
N2—C31.283 (4)C8—H80.9302
N3—N41.361 (3)C9—H90.9300
N3—C11.374 (4)C10—C111.498 (4)
N3—H30.8600C10—H10A0.9600
N4—C111.289 (4)C10—H10B0.9600
N5—C181.311 (4)C10—H10C0.9600
N5—C191.440 (4)C11—C121.473 (4)
N5—C201.441 (4)C12—C171.394 (4)
O1—C11.208 (3)C12—C131.411 (4)
O2—C51.352 (3)C13—C141.384 (5)
O2—H2A0.8200C14—C151.364 (5)
O3—C131.358 (4)C14—H140.9300
O3—H3A0.8200C15—C161.367 (5)
O4—C181.232 (4)C15—H150.9299
C2—C31.504 (4)C16—C171.368 (5)
C2—H2B0.9600C16—H160.9300
C2—H2C0.9600C17—H170.9300
C2—H2D0.9600C18—H180.9300
C3—C41.480 (4)C19—H19A0.9600
C4—C91.382 (4)C19—H19B0.9600
C4—C51.405 (4)C19—H19C0.9600
C5—C61.387 (4)C20—H20A0.9600
C6—C71.363 (5)C20—H20B0.9600
C6—H60.9300C20—H20C0.9600
C1—N1—N2116.4 (3)C11—C10—H10A109.5
C1—N1—H1121.8C11—C10—H10B109.5
N2—N1—H1121.8H10A—C10—H10B109.5
C3—N2—N1120.0 (3)C11—C10—H10C109.5
N4—N3—C1116.7 (3)H10A—C10—H10C109.5
N4—N3—H3121.6H10B—C10—H10C109.5
C1—N3—H3121.6N4—C11—C12115.4 (3)
C11—N4—N3120.2 (3)N4—C11—C10122.7 (3)
C18—N5—C19120.2 (3)C12—C11—C10121.8 (3)
C18—N5—C20121.3 (3)C17—C12—C13116.4 (3)
C19—N5—C20118.5 (3)C17—C12—C11121.2 (3)
C5—O2—H2A109.5C13—C12—C11122.4 (3)
C13—O3—H3A109.5O3—C13—C14117.2 (3)
O1—C1—N1124.8 (3)O3—C13—C12122.7 (3)
O1—C1—N3123.5 (3)C14—C13—C12120.1 (3)
N1—C1—N3111.6 (3)C15—C14—C13121.2 (4)
C3—C2—H2B109.5C15—C14—H14119.4
C3—C2—H2C109.5C13—C14—H14119.4
H2B—C2—H2C109.5C14—C15—C16119.7 (4)
C3—C2—H2D109.5C14—C15—CG159.7 (2)
H2B—C2—H2D109.5C14—C15—H15120.2
H2C—C2—H2D109.5C16—C15—H15120.2
N2—C3—C4115.1 (3)C15—C16—C17120.0 (4)
N2—C3—C2123.6 (3)C15—C16—H16120.0
C4—C3—C2121.3 (3)C17—C16—H16120.0
C9—C4—C5116.9 (3)C16—C17—C12122.5 (4)
C9—C4—C3120.9 (3)C16—C17—H17118.8
C5—C4—C3122.2 (3)C12—C17—H17118.8
O2—C5—C6116.4 (3)O4—C18—N5125.4 (4)
O2—C5—C4123.3 (3)O4—C18—H18117.3
C6—C5—C4120.3 (3)N5—C18—H18117.3
C7—C6—C5121.0 (3)N5—C19—H19A109.5
C7—C6—H6119.5N5—C19—H19B109.5
C5—C6—H6119.5H19A—C19—H19B109.5
C6—C7—C8119.6 (3)N5—C19—H19C109.5
C6—C7—H7120.2H19A—C19—H19C109.5
C8—C7—H7120.2H19B—C19—H19C109.5
C7—C8—C9120.0 (4)N5—C20—H20A109.5
C7—C8—H8120.0N5—C20—H20B109.5
C9—C8—H8120.0H20A—C20—H20B109.5
C8—C9—C4122.2 (3)N5—C20—H20C109.5
C8—C9—H9118.9H20A—C20—H20C109.5
C4—C9—H9118.9H20B—C20—H20C109.5
Cg is the centroid of the C12–C17 ring.
D—H···AD—HH···AD···AD—H···A
N1—H1···O40.862.022.805 (3)151
N3—H3···O40.862.092.858 (4)148
O2—H2A···N20.821.832.548 (3)145
O3—H3A···N40.821.832.546 (3)145
C6—H6···O1i0.932.573.241 (4)129
C10—H10A···Cgii0.962.663.536 (4)153
Table 1

Hydrogen-bond geometry (Å, °)

Cg is the centroid of the C12–C17 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O40.862.022.805 (3)151
N3—H3⋯O40.862.092.858 (4)148
O2—H2A⋯N20.821.832.548 (3)145
O3—H3A⋯N40.821.832.546 (3)145
C6—H6⋯O1i0.932.573.241 (4)129
C10—H10ACgii0.962.663.536 (4)153

Symmetry codes: (i) ; (ii) .

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