| Literature DB >> 21587581 |
Kai Wang, Ye Zhang, Xiang-Hui Yi, Yong Zhang, Ying-Ming Pan.
Abstract
In the title compound, C(21)H(28)N(2)O(5) (systematic name: methyl 1,4a-dimethyl-7-nitro-9-oxo-6-propyl-amino-1,2,3,4,4a,9,10,10a-octa-hydro-phenanthrene-1-carboxyl-ate) the cyclo-hexane ring (A) and the central cyclo-hexene ring (B) exist at a trans ring junction, with the two methyl groups in the axial positions of the six-membered rings. Ring A has a chair conformation and ring B a half-chair conformation. An intra-molecular N-H⋯O hydrogen bond occurs. The crystal structure is stabilized by inter-molecular C-H⋯O and N-H⋯O inter-actions.Entities:
Year: 2010 PMID: 21587581 PMCID: PMC2983386 DOI: 10.1107/S1600536810032824
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C21H28N2O5 | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 6184 reflections |
| θ = 3.0–27.5° | |
| µ = 0.10 mm−1 | |
| Block, yellow | |
| 0.40 × 0.18 × 0.14 mm |
| Rigaku Saturn diffractometer | 2492 independent reflections |
| Radiation source: fine-focus sealed tube | 2249 reflections with |
| graphite | |
| Detector resolution: 14.63 pixels mm-1 | θmax = 27.5°, θmin = 3.0° |
| ω scans | |
| Absorption correction: multi-scan (Jacobson, 1998) | |
| 9263 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2492 reflections | (Δ/σ)max < 0.001 |
| 262 parameters | Δρmax = 0.16 e Å−3 |
| 0 restraints | Δρmin = −0.20 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | −0.0800 (3) | 0.5805 (2) | 0.50671 (13) | 0.0413 (7) | |
| O2 | 0.1082 (3) | 0.8201 (2) | 0.32927 (14) | 0.0428 (7) | |
| O3 | 0.3574 (3) | 0.8723 (2) | 0.31899 (13) | 0.0374 (6) | |
| O4 | 0.1294 (4) | 0.3814 (3) | 0.75394 (15) | 0.0594 (9) | |
| O5 | 0.2387 (3) | 0.5514 (2) | 0.72342 (13) | 0.0393 (6) | |
| N1 | 0.5809 (3) | 0.7320 (3) | 0.37018 (15) | 0.0301 (7) | |
| H1A | 0.552 (4) | 0.784 (3) | 0.3368 (19) | 0.034 (10)* | |
| N2 | 0.2510 (3) | 0.8110 (3) | 0.34543 (14) | 0.0296 (6) | |
| C1 | 0.4799 (4) | 0.5968 (3) | 0.45202 (16) | 0.0273 (7) | |
| H1B | 0.5847 | 0.5672 | 0.4583 | 0.033* | |
| C2 | 0.4562 (4) | 0.6880 (3) | 0.40463 (16) | 0.0261 (7) | |
| C3 | 0.2948 (4) | 0.7264 (3) | 0.39580 (16) | 0.0264 (7) | |
| C4 | 0.1710 (4) | 0.6826 (3) | 0.43411 (16) | 0.0272 (7) | |
| H4 | 0.0662 | 0.7126 | 0.4284 | 0.033* | |
| C5 | 0.1976 (4) | 0.5958 (3) | 0.48066 (16) | 0.0259 (7) | |
| C6 | 0.3556 (4) | 0.5500 (3) | 0.48907 (15) | 0.0249 (7) | |
| C7 | 0.0594 (4) | 0.5512 (3) | 0.51883 (17) | 0.0306 (8) | |
| C8 | 0.0933 (4) | 0.4657 (3) | 0.57383 (17) | 0.0291 (7) | |
| H8A | 0.0626 | 0.3863 | 0.5595 | 0.035* | |
| H8B | 0.0262 | 0.4863 | 0.6119 | 0.035* | |
| C9 | 0.2698 (4) | 0.4647 (3) | 0.59499 (15) | 0.0255 (7) | |
| H9 | 0.2930 | 0.5455 | 0.6106 | 0.031* | |
| C10 | 0.2965 (4) | 0.3826 (3) | 0.65599 (17) | 0.0285 (7) | |
| C11 | 0.4779 (4) | 0.3807 (3) | 0.67347 (18) | 0.0336 (8) | |
| H11A | 0.5099 | 0.4585 | 0.6899 | 0.040* | |
| H11B | 0.4962 | 0.3233 | 0.7088 | 0.040* | |
| C12 | 0.5822 (5) | 0.3488 (4) | 0.61471 (19) | 0.0382 (9) | |
| H12A | 0.5536 | 0.2697 | 0.5992 | 0.046* | |
| H12B | 0.6958 | 0.3477 | 0.6281 | 0.046* | |
| C13 | 0.5592 (4) | 0.4378 (3) | 0.55853 (18) | 0.0339 (8) | |
| H13A | 0.6285 | 0.4154 | 0.5214 | 0.041* | |
| H13B | 0.5933 | 0.5160 | 0.5737 | 0.041* | |
| C14 | 0.3833 (4) | 0.4444 (3) | 0.53470 (16) | 0.0264 (7) | |
| C15 | 0.7445 (4) | 0.6817 (3) | 0.36949 (17) | 0.0294 (7) | |
| H15A | 0.7771 | 0.6639 | 0.4148 | 0.035* | |
| H15B | 0.8197 | 0.7406 | 0.3520 | 0.035* | |
| C16 | 0.7571 (4) | 0.5698 (3) | 0.32818 (18) | 0.0346 (8) | |
| H16A | 0.7319 | 0.5881 | 0.2821 | 0.042* | |
| H16B | 0.6781 | 0.5120 | 0.3439 | 0.042* | |
| C17 | 0.9260 (4) | 0.5170 (3) | 0.33244 (19) | 0.0364 (9) | |
| H17A | 1.0049 | 0.5762 | 0.3202 | 0.055* | |
| H17B | 0.9340 | 0.4504 | 0.3026 | 0.055* | |
| H17C | 0.9465 | 0.4909 | 0.3772 | 0.055* | |
| C18 | 0.2105 (4) | 0.4364 (3) | 0.71584 (18) | 0.0326 (8) | |
| C19 | 0.1741 (5) | 0.6042 (4) | 0.7827 (2) | 0.0500 (11) | |
| H19A | 0.0574 | 0.5989 | 0.7821 | 0.075* | |
| H19B | 0.2061 | 0.6864 | 0.7848 | 0.075* | |
| H19C | 0.2156 | 0.5627 | 0.8210 | 0.075* | |
| C20 | 0.2305 (5) | 0.2577 (3) | 0.6477 (2) | 0.0412 (9) | |
| H20A | 0.2449 | 0.2143 | 0.6885 | 0.062* | |
| H20B | 0.2882 | 0.2182 | 0.6125 | 0.062* | |
| H20C | 0.1167 | 0.2613 | 0.6369 | 0.062* | |
| C21 | 0.3452 (5) | 0.3342 (3) | 0.49327 (18) | 0.0376 (9) | |
| H21A | 0.4110 | 0.3344 | 0.4538 | 0.056* | |
| H21B | 0.2321 | 0.3347 | 0.4811 | 0.056* | |
| H21C | 0.3684 | 0.2640 | 0.5189 | 0.056* |
| O1 | 0.0236 (12) | 0.0637 (19) | 0.0365 (15) | 0.0019 (13) | 0.0007 (11) | 0.0130 (14) |
| O2 | 0.0259 (13) | 0.0531 (16) | 0.0492 (17) | 0.0044 (13) | −0.0076 (13) | 0.0179 (14) |
| O3 | 0.0346 (13) | 0.0395 (14) | 0.0382 (15) | −0.0046 (12) | 0.0018 (12) | 0.0126 (12) |
| O4 | 0.077 (2) | 0.0477 (17) | 0.053 (2) | 0.0017 (17) | 0.0362 (18) | 0.0111 (15) |
| O5 | 0.0461 (15) | 0.0413 (14) | 0.0305 (14) | 0.0002 (13) | 0.0097 (12) | −0.0060 (12) |
| N1 | 0.0234 (14) | 0.0372 (17) | 0.0299 (16) | −0.0009 (13) | 0.0009 (12) | 0.0100 (13) |
| N2 | 0.0298 (15) | 0.0315 (15) | 0.0275 (14) | 0.0017 (14) | −0.0013 (13) | 0.0004 (13) |
| C1 | 0.0216 (14) | 0.0353 (19) | 0.0248 (17) | 0.0028 (14) | 0.0011 (13) | 0.0005 (15) |
| C2 | 0.0239 (16) | 0.0304 (18) | 0.0239 (17) | −0.0055 (15) | 0.0017 (13) | −0.0018 (15) |
| C3 | 0.0275 (16) | 0.0288 (17) | 0.0228 (16) | 0.0026 (15) | −0.0052 (13) | 0.0015 (14) |
| C4 | 0.0210 (15) | 0.0338 (18) | 0.0268 (17) | −0.0007 (15) | 0.0008 (13) | −0.0020 (14) |
| C5 | 0.0214 (14) | 0.0314 (17) | 0.0250 (17) | 0.0004 (14) | 0.0019 (12) | −0.0001 (14) |
| C6 | 0.0251 (15) | 0.0306 (17) | 0.0191 (15) | −0.0040 (14) | −0.0012 (13) | −0.0021 (13) |
| C7 | 0.0255 (16) | 0.039 (2) | 0.0271 (18) | −0.0021 (16) | 0.0007 (14) | −0.0005 (16) |
| C8 | 0.0255 (16) | 0.0344 (19) | 0.0274 (18) | −0.0031 (15) | 0.0029 (13) | 0.0044 (15) |
| C9 | 0.0261 (17) | 0.0260 (17) | 0.0245 (16) | 0.0017 (15) | 0.0013 (13) | −0.0003 (13) |
| C10 | 0.0323 (17) | 0.0271 (17) | 0.0261 (17) | 0.0002 (15) | 0.0035 (14) | 0.0041 (14) |
| C11 | 0.0343 (18) | 0.039 (2) | 0.0271 (18) | 0.0047 (16) | 0.0000 (15) | 0.0068 (16) |
| C12 | 0.0332 (19) | 0.046 (2) | 0.036 (2) | 0.0116 (18) | 0.0032 (17) | 0.0074 (17) |
| C13 | 0.0305 (17) | 0.042 (2) | 0.0290 (19) | 0.0076 (17) | 0.0032 (14) | 0.0060 (16) |
| C14 | 0.0274 (16) | 0.0258 (17) | 0.0259 (17) | 0.0019 (15) | 0.0030 (13) | −0.0010 (14) |
| C15 | 0.0202 (15) | 0.0356 (19) | 0.0326 (18) | 0.0007 (16) | −0.0007 (14) | 0.0027 (15) |
| C16 | 0.0302 (17) | 0.040 (2) | 0.0332 (19) | −0.0007 (17) | 0.0017 (15) | −0.0035 (16) |
| C17 | 0.0303 (17) | 0.041 (2) | 0.038 (2) | 0.0018 (17) | 0.0047 (16) | −0.0022 (17) |
| C18 | 0.0332 (18) | 0.0372 (19) | 0.0272 (18) | 0.0019 (16) | 0.0003 (14) | 0.0058 (16) |
| C19 | 0.061 (3) | 0.059 (3) | 0.030 (2) | 0.010 (2) | 0.007 (2) | −0.013 (2) |
| C20 | 0.051 (2) | 0.0318 (19) | 0.041 (2) | 0.0020 (19) | 0.0046 (19) | 0.0052 (17) |
| C21 | 0.051 (2) | 0.035 (2) | 0.0275 (19) | −0.0011 (18) | 0.0040 (17) | −0.0043 (16) |
| O1—C7 | 1.227 (4) | C10—C11 | 1.545 (5) |
| O2—N2 | 1.233 (3) | C11—C12 | 1.517 (5) |
| O3—N2 | 1.245 (3) | C11—H11A | 0.9800 |
| O4—C18 | 1.200 (4) | C11—H11B | 0.9800 |
| O5—C18 | 1.334 (4) | C12—C13 | 1.535 (5) |
| O5—C19 | 1.447 (4) | C12—H12A | 0.9800 |
| N1—C2 | 1.344 (4) | C12—H12B | 0.9800 |
| N1—C15 | 1.472 (4) | C13—C14 | 1.539 (5) |
| N1—H1A | 0.93 (4) | C13—H13A | 0.9800 |
| N2—C3 | 1.448 (4) | C13—H13B | 0.9800 |
| C1—C6 | 1.382 (4) | C14—C21 | 1.540 (5) |
| C1—C2 | 1.426 (5) | C15—C16 | 1.525 (5) |
| C1—H1B | 0.9400 | C15—H15A | 0.9800 |
| C2—C3 | 1.418 (4) | C15—H15B | 0.9800 |
| C3—C4 | 1.380 (5) | C16—C17 | 1.525 (5) |
| C4—C5 | 1.383 (5) | C16—H16A | 0.9800 |
| C4—H4 | 0.9400 | C16—H16B | 0.9800 |
| C5—C6 | 1.419 (4) | C17—H17A | 0.9700 |
| C5—C7 | 1.472 (4) | C17—H17B | 0.9700 |
| C6—C14 | 1.531 (5) | C17—H17C | 0.9700 |
| C7—C8 | 1.505 (5) | C19—H19A | 0.9700 |
| C8—C9 | 1.525 (4) | C19—H19B | 0.9700 |
| C8—H8A | 0.9800 | C19—H19C | 0.9700 |
| C8—H8B | 0.9800 | C20—H20A | 0.9700 |
| C9—C14 | 1.560 (4) | C20—H20B | 0.9700 |
| C9—C10 | 1.564 (5) | C20—H20C | 0.9700 |
| C9—H9 | 0.9900 | C21—H21A | 0.9700 |
| C10—C20 | 1.529 (5) | C21—H21B | 0.9700 |
| C10—C18 | 1.535 (5) | C21—H21C | 0.9700 |
| C18—O5—C19 | 115.8 (3) | C11—C12—H12B | 109.5 |
| C2—N1—C15 | 124.8 (3) | C13—C12—H12B | 109.5 |
| C2—N1—H1A | 115 (2) | H12A—C12—H12B | 108.1 |
| C15—N1—H1A | 118 (2) | C12—C13—C14 | 112.5 (3) |
| O2—N2—O3 | 121.3 (3) | C12—C13—H13A | 109.1 |
| O2—N2—C3 | 119.0 (3) | C14—C13—H13A | 109.1 |
| O3—N2—C3 | 119.7 (3) | C12—C13—H13B | 109.1 |
| C6—C1—C2 | 122.8 (3) | C14—C13—H13B | 109.1 |
| C6—C1—H1B | 118.6 | H13A—C13—H13B | 107.8 |
| C2—C1—H1B | 118.6 | C6—C14—C13 | 111.8 (3) |
| N1—C2—C3 | 123.1 (3) | C6—C14—C21 | 105.9 (3) |
| N1—C2—C1 | 120.9 (3) | C13—C14—C21 | 109.0 (3) |
| C3—C2—C1 | 116.0 (3) | C6—C14—C9 | 105.6 (3) |
| C4—C3—C2 | 121.4 (3) | C13—C14—C9 | 109.4 (3) |
| C4—C3—N2 | 116.7 (3) | C21—C14—C9 | 115.1 (3) |
| C2—C3—N2 | 122.0 (3) | N1—C15—C16 | 113.0 (3) |
| C3—C4—C5 | 121.5 (3) | N1—C15—H15A | 109.0 |
| C3—C4—H4 | 119.3 | C16—C15—H15A | 109.0 |
| C5—C4—H4 | 119.3 | N1—C15—H15B | 109.0 |
| C4—C5—C6 | 119.3 (3) | C16—C15—H15B | 109.0 |
| C4—C5—C7 | 118.7 (3) | H15A—C15—H15B | 107.8 |
| C6—C5—C7 | 122.0 (3) | C15—C16—C17 | 111.0 (3) |
| C1—C6—C5 | 118.9 (3) | C15—C16—H16A | 109.4 |
| C1—C6—C14 | 121.1 (3) | C17—C16—H16A | 109.4 |
| C5—C6—C14 | 119.8 (3) | C15—C16—H16B | 109.4 |
| O1—C7—C5 | 122.3 (3) | C17—C16—H16B | 109.4 |
| O1—C7—C8 | 119.9 (3) | H16A—C16—H16B | 108.0 |
| C5—C7—C8 | 117.8 (3) | C16—C17—H17A | 109.5 |
| C7—C8—C9 | 113.1 (3) | C16—C17—H17B | 109.5 |
| C7—C8—H8A | 109.0 | H17A—C17—H17B | 109.5 |
| C9—C8—H8A | 109.0 | C16—C17—H17C | 109.5 |
| C7—C8—H8B | 109.0 | H17A—C17—H17C | 109.5 |
| C9—C8—H8B | 109.0 | H17B—C17—H17C | 109.5 |
| H8A—C8—H8B | 107.8 | O4—C18—O5 | 122.2 (4) |
| C8—C9—C14 | 111.1 (3) | O4—C18—C10 | 124.3 (3) |
| C8—C9—C10 | 111.3 (3) | O5—C18—C10 | 113.5 (3) |
| C14—C9—C10 | 116.6 (3) | O5—C19—H19A | 109.5 |
| C8—C9—H9 | 105.7 | O5—C19—H19B | 109.5 |
| C14—C9—H9 | 105.7 | H19A—C19—H19B | 109.5 |
| C10—C9—H9 | 105.7 | O5—C19—H19C | 109.5 |
| C20—C10—C18 | 106.8 (3) | H19A—C19—H19C | 109.5 |
| C20—C10—C11 | 111.1 (3) | H19B—C19—H19C | 109.5 |
| C18—C10—C11 | 106.1 (3) | C10—C20—H20A | 109.5 |
| C20—C10—C9 | 114.5 (3) | C10—C20—H20B | 109.5 |
| C18—C10—C9 | 108.9 (3) | H20A—C20—H20B | 109.5 |
| C11—C10—C9 | 109.2 (3) | C10—C20—H20C | 109.5 |
| C12—C11—C10 | 112.2 (3) | H20A—C20—H20C | 109.5 |
| C12—C11—H11A | 109.2 | H20B—C20—H20C | 109.5 |
| C10—C11—H11A | 109.2 | C14—C21—H21A | 109.5 |
| C12—C11—H11B | 109.2 | C14—C21—H21B | 109.5 |
| C10—C11—H11B | 109.2 | H21A—C21—H21B | 109.5 |
| H11A—C11—H11B | 107.9 | C14—C21—H21C | 109.5 |
| C11—C12—C13 | 110.8 (3) | H21A—C21—H21C | 109.5 |
| C11—C12—H12A | 109.5 | H21B—C21—H21C | 109.5 |
| C13—C12—H12A | 109.5 | ||
| C15—N1—C2—C3 | −169.2 (3) | C14—C9—C10—C18 | 164.2 (3) |
| C15—N1—C2—C1 | 9.6 (5) | C8—C9—C10—C11 | 177.6 (3) |
| C6—C1—C2—N1 | 179.2 (3) | C14—C9—C10—C11 | 48.8 (4) |
| C6—C1—C2—C3 | −2.0 (5) | C20—C10—C11—C12 | 73.9 (4) |
| N1—C2—C3—C4 | −177.2 (3) | C18—C10—C11—C12 | −170.4 (3) |
| C1—C2—C3—C4 | 4.0 (5) | C9—C10—C11—C12 | −53.2 (4) |
| N1—C2—C3—N2 | 4.2 (5) | C10—C11—C12—C13 | 59.8 (4) |
| C1—C2—C3—N2 | −174.6 (3) | C11—C12—C13—C14 | −59.2 (4) |
| O2—N2—C3—C4 | −15.9 (5) | C1—C6—C14—C13 | 26.8 (4) |
| O3—N2—C3—C4 | 164.6 (3) | C5—C6—C14—C13 | −157.9 (3) |
| O2—N2—C3—C2 | 162.7 (3) | C1—C6—C14—C21 | −91.8 (4) |
| O3—N2—C3—C2 | −16.7 (5) | C5—C6—C14—C21 | 83.5 (4) |
| C2—C3—C4—C5 | −3.0 (5) | C1—C6—C14—C9 | 145.7 (3) |
| N2—C3—C4—C5 | 175.7 (3) | C5—C6—C14—C9 | −39.0 (4) |
| C3—C4—C5—C6 | −0.3 (5) | C12—C13—C14—C6 | 168.4 (3) |
| C3—C4—C5—C7 | −178.7 (3) | C12—C13—C14—C21 | −74.8 (4) |
| C2—C1—C6—C5 | −1.1 (5) | C12—C13—C14—C9 | 51.8 (4) |
| C2—C1—C6—C14 | 174.2 (3) | C8—C9—C14—C6 | 62.4 (3) |
| C4—C5—C6—C1 | 2.3 (5) | C10—C9—C14—C6 | −168.7 (3) |
| C7—C5—C6—C1 | −179.4 (3) | C8—C9—C14—C13 | −177.2 (3) |
| C4—C5—C6—C14 | −173.1 (3) | C10—C9—C14—C13 | −48.3 (4) |
| C7—C5—C6—C14 | 5.2 (5) | C8—C9—C14—C21 | −54.0 (4) |
| C4—C5—C7—O1 | 6.8 (5) | C10—C9—C14—C21 | 74.9 (4) |
| C6—C5—C7—O1 | −171.5 (3) | C2—N1—C15—C16 | 75.2 (4) |
| C4—C5—C7—C8 | −174.0 (3) | N1—C15—C16—C17 | −176.5 (3) |
| C6—C5—C7—C8 | 7.7 (5) | C19—O5—C18—O4 | 3.8 (5) |
| O1—C7—C8—C9 | −164.0 (3) | C19—O5—C18—C10 | −173.9 (3) |
| C5—C7—C8—C9 | 16.8 (4) | C20—C10—C18—O4 | 11.4 (5) |
| C7—C8—C9—C14 | −53.1 (4) | C11—C10—C18—O4 | −107.1 (4) |
| C7—C8—C9—C10 | 175.2 (3) | C9—C10—C18—O4 | 135.5 (4) |
| C8—C9—C10—C20 | 52.4 (4) | C20—C10—C18—O5 | −170.8 (3) |
| C14—C9—C10—C20 | −76.4 (4) | C11—C10—C18—O5 | 70.6 (4) |
| C8—C9—C10—C18 | −67.0 (3) | C9—C10—C18—O5 | −46.8 (4) |
| H··· | ||||
| N1—H1A···O3 | 0.93 (4) | 1.94 (4) | 2.654 (4) | 133 (3) |
| C8—H8B···O3i | 0.98 | 2.55 | 3.454 (4) | 154 |
| C15—H15A···O1ii | 0.98 | 2.40 | 3.344 (4) | 161 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.93 (4) | 1.94 (4) | 2.654 (4) | 133 (3) |
| C8—H8 | 0.98 | 2.55 | 3.454 (4) | 154 |
| C15—H15 | 0.98 | 2.40 | 3.344 (4) | 161 |
Symmetry codes: (i) ; (ii) .