Literature DB >> 21587524

(2E)-2-Benzyl-idene-5,6-dimethoxy-indan-1-one.

Mohamed Ashraf Ali, Rusli Ismail, Soo Choon Tan, Chin Sing Yeap, Hoong-Kun Fun.   

Abstract

The mol-ecular structure of the title compound, C(18)H(16)O(3), is roughly planar; the maximum deviation of the indanone ring system is 0.027 (1) Å and it makes a dihedral angle of 2.69 (3)° with the phenyl ring. The torsion angles between the two meth-oxy groups and the -indanone ring are -14.67 (11) and -1.11 (12)°. In the crystal, mol-ecules are connected into a ribbon along the a axis via weak inter-molecular C-H⋯O hydrogen bonds. Weak inter-molecular C-H⋯π and π-π [centroid-centroid distance = 3.7086 (6) Å] inter-actions are also observed.

Entities:  

Year:  2010        PMID: 21587524      PMCID: PMC2983266          DOI: 10.1107/S1600536810035695

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to and the biological activity of chalcone derivatives, see: Boumendjel et al. (2009 ▶); D’Archivio et al. (2008 ▶); Dicarlo et al. (1999 ▶); Echeverria et al. (2009 ▶); Heidenreich et al. (2008 ▶); Katsori & Hadjipavlou-Latina (2009 ▶); Miranda et al. (1999 ▶); Nowakowska (2007 ▶); Shah et al. (2008 ▶); Syed et al. (2008 ▶). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C18H16O3 M = 280.31 Monoclinic, a = 6.0209 (6) Å b = 14.8550 (14) Å c = 15.2292 (15) Å β = 90.603 (2)° V = 1362.0 (2) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 100 K 0.44 × 0.29 × 0.16 mm

Data collection

Bruker APEXII DUO CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.960, T max = 0.985 31475 measured reflections 6003 independent reflections 4902 reflections with I > 2σ(I) R int = 0.048

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.130 S = 1.09 6003 reflections 192 parameters H-atom parameters constrained Δρmax = 0.60 e Å−3 Δρmin = −0.58 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810035695/is2598sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810035695/is2598Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H16O3F(000) = 592
Mr = 280.31Dx = 1.367 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 7296 reflections
a = 6.0209 (6) Åθ = 2.7–34.9°
b = 14.8550 (14) ŵ = 0.09 mm1
c = 15.2292 (15) ÅT = 100 K
β = 90.603 (2)°Yellow, colourless
V = 1362.0 (2) Å30.44 × 0.29 × 0.16 mm
Z = 4
Bruker APEXII DUO CCD area-detector diffractometer6003 independent reflections
Radiation source: fine-focus sealed tube4902 reflections with I > 2σ(I)
graphiteRint = 0.048
φ and ω scansθmax = 35.0°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −9→9
Tmin = 0.960, Tmax = 0.985k = −23→23
31475 measured reflectionsl = −23→24
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.130H-atom parameters constrained
S = 1.09w = 1/[σ2(Fo2) + (0.0698P)2 + 0.2363P] where P = (Fo2 + 2Fc2)/3
6003 reflections(Δ/σ)max = 0.001
192 parametersΔρmax = 0.60 e Å3
0 restraintsΔρmin = −0.58 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.07043 (10)0.71482 (4)0.09037 (4)0.01685 (13)
O20.07512 (10)0.55593 (4)0.41523 (4)0.01527 (12)
O30.42675 (10)0.46101 (4)0.40716 (4)0.01623 (13)
C10.22764 (13)0.66575 (5)0.11035 (5)0.01189 (13)
C20.26214 (13)0.61731 (5)0.19344 (5)0.01122 (13)
C30.12486 (13)0.61613 (5)0.26768 (5)0.01208 (13)
H3A−0.00550.64970.26890.014*
C40.18842 (13)0.56395 (5)0.33862 (5)0.01188 (13)
C50.38768 (13)0.51154 (5)0.33496 (5)0.01213 (13)
C60.52425 (13)0.51522 (5)0.26166 (5)0.01263 (14)
H6A0.65610.48270.26020.015*
C70.45911 (12)0.56873 (5)0.19043 (5)0.01121 (13)
C80.57760 (13)0.58179 (5)0.10412 (5)0.01231 (13)
H8A0.59660.52490.07380.015*
H8B0.72190.60950.11310.015*
C90.42250 (13)0.64368 (5)0.05349 (5)0.01186 (13)
C100.43407 (13)0.67809 (5)−0.02828 (5)0.01274 (14)
H10A0.31540.7150−0.04410.015*
C110.60191 (13)0.66724 (5)−0.09638 (5)0.01229 (13)
C120.79718 (14)0.61621 (6)−0.08618 (5)0.01469 (14)
H12A0.82590.5868−0.03340.018*
C130.94801 (14)0.60945 (6)−0.15463 (6)0.01690 (15)
H13A1.07600.5751−0.14720.020*
C140.90917 (15)0.65353 (6)−0.23413 (6)0.01682 (15)
H14A1.01060.6487−0.27950.020*
C150.71743 (15)0.70489 (6)−0.24506 (6)0.01576 (15)
H15A0.69100.7349−0.29770.019*
C160.56526 (14)0.71135 (5)−0.17716 (5)0.01416 (14)
H16A0.43700.7454−0.18530.017*
C17−0.09525 (14)0.62140 (6)0.43137 (6)0.01619 (15)
H17A−0.15450.61220.48900.024*
H17B−0.21180.61490.38830.024*
H17C−0.03330.68080.42760.024*
C180.62128 (14)0.40534 (6)0.40883 (6)0.01640 (15)
H18A0.62350.37010.46170.025*
H18B0.75140.44260.40710.025*
H18C0.61920.36600.35880.025*
U11U22U33U12U13U23
O10.0151 (3)0.0202 (3)0.0153 (3)0.0057 (2)0.0018 (2)0.0026 (2)
O20.0144 (3)0.0191 (3)0.0123 (3)0.0035 (2)0.0052 (2)0.0029 (2)
O30.0157 (3)0.0197 (3)0.0133 (3)0.0048 (2)0.0024 (2)0.0056 (2)
C10.0121 (3)0.0125 (3)0.0111 (3)0.0000 (2)0.0014 (2)−0.0003 (2)
C20.0117 (3)0.0116 (3)0.0104 (3)−0.0001 (2)0.0013 (2)0.0003 (2)
C30.0116 (3)0.0128 (3)0.0119 (3)0.0004 (2)0.0017 (2)0.0001 (2)
C40.0109 (3)0.0137 (3)0.0111 (3)−0.0003 (2)0.0024 (2)0.0000 (2)
C50.0122 (3)0.0126 (3)0.0116 (3)0.0001 (2)0.0005 (2)0.0014 (2)
C60.0116 (3)0.0143 (3)0.0120 (3)0.0013 (2)0.0012 (2)0.0009 (2)
C70.0112 (3)0.0114 (3)0.0110 (3)−0.0005 (2)0.0013 (2)−0.0001 (2)
C80.0118 (3)0.0140 (3)0.0111 (3)0.0013 (2)0.0021 (2)0.0007 (2)
C90.0118 (3)0.0124 (3)0.0115 (3)0.0005 (2)0.0019 (2)0.0000 (2)
C100.0134 (3)0.0130 (3)0.0118 (3)0.0010 (2)0.0015 (2)0.0003 (2)
C110.0136 (3)0.0120 (3)0.0113 (3)−0.0004 (2)0.0015 (2)0.0002 (2)
C120.0143 (3)0.0165 (3)0.0133 (3)0.0018 (3)0.0019 (3)0.0014 (3)
C130.0148 (3)0.0193 (4)0.0167 (4)0.0021 (3)0.0038 (3)−0.0005 (3)
C140.0175 (4)0.0185 (4)0.0146 (3)−0.0029 (3)0.0057 (3)−0.0015 (3)
C150.0186 (4)0.0164 (3)0.0123 (3)−0.0030 (3)0.0024 (3)0.0015 (3)
C160.0154 (3)0.0145 (3)0.0126 (3)0.0003 (2)0.0012 (3)0.0013 (2)
C170.0141 (3)0.0189 (4)0.0156 (3)0.0024 (3)0.0043 (3)−0.0007 (3)
C180.0153 (3)0.0169 (3)0.0171 (4)0.0032 (3)−0.0010 (3)0.0032 (3)
O1—C11.2303 (10)C10—C111.4645 (11)
O2—C41.3628 (10)C10—H10A0.9300
O2—C171.4366 (10)C11—C121.4061 (11)
O3—C51.3499 (10)C11—C161.4092 (11)
O3—C181.4338 (10)C12—C131.3933 (12)
C1—C21.4687 (11)C12—H12A0.9300
C1—C91.5017 (11)C13—C141.3941 (12)
C2—C71.3894 (11)C13—H13A0.9300
C2—C31.4076 (11)C14—C151.3923 (13)
C3—C41.3805 (11)C14—H14A0.9300
C3—H3A0.9300C15—C161.3920 (12)
C4—C51.4318 (11)C15—H15A0.9300
C5—C61.3945 (11)C16—H16A0.9300
C6—C71.3977 (11)C17—H17A0.9600
C6—H6A0.9300C17—H17B0.9600
C7—C81.5146 (11)C17—H17C0.9600
C8—C91.5154 (11)C18—H18A0.9600
C8—H8A0.9700C18—H18B0.9600
C8—H8B0.9700C18—H18C0.9600
C9—C101.3487 (11)
C4—O2—C17116.88 (6)C9—C10—H10A114.5
C5—O3—C18118.07 (7)C11—C10—H10A114.5
O1—C1—C2127.21 (7)C12—C11—C16118.04 (7)
O1—C1—C9126.20 (7)C12—C11—C10124.30 (7)
C2—C1—C9106.59 (6)C16—C11—C10117.65 (7)
C7—C2—C3121.92 (7)C13—C12—C11120.47 (8)
C7—C2—C1109.82 (7)C13—C12—H12A119.8
C3—C2—C1128.26 (7)C11—C12—H12A119.8
C4—C3—C2118.38 (7)C12—C13—C14120.74 (8)
C4—C3—H3A120.8C12—C13—H13A119.6
C2—C3—H3A120.8C14—C13—H13A119.6
O2—C4—C3125.58 (7)C15—C14—C13119.50 (8)
O2—C4—C5114.40 (7)C15—C14—H14A120.2
C3—C4—C5120.02 (7)C13—C14—H14A120.2
O3—C5—C6125.08 (7)C16—C15—C14120.02 (8)
O3—C5—C4114.17 (7)C16—C15—H15A120.0
C6—C5—C4120.75 (7)C14—C15—H15A120.0
C5—C6—C7118.72 (7)C15—C16—C11121.21 (8)
C5—C6—H6A120.6C15—C16—H16A119.4
C7—C6—H6A120.6C11—C16—H16A119.4
C2—C7—C6120.16 (7)O2—C17—H17A109.5
C2—C7—C8111.85 (7)O2—C17—H17B109.5
C6—C7—C8127.99 (7)H17A—C17—H17B109.5
C7—C8—C9103.06 (6)O2—C17—H17C109.5
C7—C8—H8A111.2H17A—C17—H17C109.5
C9—C8—H8A111.2H17B—C17—H17C109.5
C7—C8—H8B111.2O3—C18—H18A109.5
C9—C8—H8B111.2O3—C18—H18B109.5
H8A—C8—H8B109.1H18A—C18—H18B109.5
C10—C9—C1119.86 (7)O3—C18—H18C109.5
C10—C9—C8131.47 (7)H18A—C18—H18C109.5
C1—C9—C8108.67 (6)H18B—C18—H18C109.5
C9—C10—C11130.91 (7)
O1—C1—C2—C7179.73 (8)C5—C6—C7—C20.24 (11)
C9—C1—C2—C7−0.12 (8)C5—C6—C7—C8−178.92 (7)
O1—C1—C2—C30.09 (13)C2—C7—C8—C9−1.30 (8)
C9—C1—C2—C3−179.76 (7)C6—C7—C8—C9177.91 (8)
C7—C2—C3—C4−0.86 (11)O1—C1—C9—C10−0.86 (13)
C1—C2—C3—C4178.74 (7)C2—C1—C9—C10179.00 (7)
C17—O2—C4—C3−14.67 (11)O1—C1—C9—C8179.44 (8)
C17—O2—C4—C5165.99 (7)C2—C1—C9—C8−0.71 (8)
C2—C3—C4—O2179.62 (7)C7—C8—C9—C10−178.48 (8)
C2—C3—C4—C5−1.07 (11)C7—C8—C9—C11.18 (8)
C18—O3—C5—C6−1.11 (12)C1—C9—C10—C11−179.66 (8)
C18—O3—C5—C4179.19 (7)C8—C9—C10—C11−0.03 (15)
O2—C4—C5—O31.72 (10)C9—C10—C11—C12−1.40 (14)
C3—C4—C5—O3−177.66 (7)C9—C10—C11—C16178.97 (8)
O2—C4—C5—C6−178.00 (7)C16—C11—C12—C13−0.44 (12)
C3—C4—C5—C62.62 (12)C10—C11—C12—C13179.93 (8)
O3—C5—C6—C7178.15 (7)C11—C12—C13—C140.46 (13)
C4—C5—C6—C7−2.16 (12)C12—C13—C14—C150.04 (13)
C3—C2—C7—C61.31 (11)C13—C14—C15—C16−0.54 (13)
C1—C2—C7—C6−178.36 (7)C14—C15—C16—C110.55 (12)
C3—C2—C7—C8−179.41 (7)C12—C11—C16—C15−0.06 (12)
C1—C2—C7—C80.92 (9)C10—C11—C16—C15179.60 (7)
Cg1 is the centroid of C2–C7 benzene ring.
D—H···AD—HH···AD···AD—H···A
C17—H17A···O3i0.962.533.4107 (11)152
C18—H18B···O2ii0.962.583.5320 (11)173
C16—H16A···Cg1iii0.932.993.7224 (9)137
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of C2–C7 benzene ring.

D—H⋯AD—HH⋯ADAD—H⋯A
C17—H17A⋯O3i0.962.533.4107 (11)152
C18—H18B⋯O2ii0.962.583.5320 (11)173
C16—H16ACg1iii0.932.993.7224 (9)137

Symmetry codes: (i) ; (ii) ; (iii) .

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1.  (E)-5,6-Dimeth-oxy-2-(pyridin-4-yl-methyl-idene)-2,3-dihydro-1H-inden-1-one.

Authors:  Mohamed Ashraf Ali; Rusli Ismail; Soo Choon Tan; Chin Sing Yeap; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-10-09

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