Literature DB >> 21587523

{3-[(2-Chloro-1,3-thia-zol-4-yl)meth-yl]-1,3-thia-zolidin-2-yl-idene-amino}-formonitrile.

Ying-Qi Li1.   

Abstract

In the title compound, C(8)H(7)ClN(4)S(2), the dihedral angle between the thia-zolidine ring (r.m.s. deviation = 0.028 Å) and the thia-zole ring (r.m.s. deviation = 0.004 Å) is 74.74 (6)°. The formonitrile group is almost coplanar with the attached ring [C-N-C-N torsion angle = 167 (2)°.

Entities:  

Year:  2010        PMID: 21587523      PMCID: PMC2983363          DOI: 10.1107/S1600536810035579

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of compounds containing a thia­zole ring, see: Ehrenfreund et al. (2003 ▶); Kim et al. (2002 ▶); Maienfisch & Gsell (1998 ▶); Shiga et al. (2003 ▶); Smith & Hunter (2001 ▶); Tanaka et al. (2005 ▶). For the bioactivity of 1,3-thia­zolidine derivatives, see: Albrecht et al. (2005 ▶); Liu & Li (2000 ▶); Ueda et al. (2004 ▶); Yeh & Chen (2002 ▶).

Experimental

Crystal data

C8H7ClN4S2 M = 258.75 Monoclinic, a = 6.1731 (9) Å b = 16.807 (2) Å c = 10.9057 (14) Å β = 105.846 (2)° V = 1088.5 (3) Å3 Z = 4 Mo Kα radiation μ = 0.70 mm−1 T = 294 K 0.22 × 0.20 × 0.18 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.860, T max = 0.884 6141 measured reflections 2220 independent reflections 1862 reflections with I > 2σ(I) R int = 0.021

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.103 S = 1.05 2220 reflections 136 parameters H-atom parameters constrained Δρmax = 0.30 e Å−3 Δρmin = −0.34 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810035579/ci5173sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810035579/ci5173Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C8H7ClN4S2F(000) = 528
Mr = 258.75Dx = 1.579 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 3431 reflections
a = 6.1731 (9) Åθ = 2.4–26.2°
b = 16.807 (2) ŵ = 0.70 mm1
c = 10.9057 (14) ÅT = 294 K
β = 105.846 (2)°Monoclinic, colourless
V = 1088.5 (3) Å30.22 × 0.20 × 0.18 mm
Z = 4
Bruker SMART CCD area-detector diffractometer2220 independent reflections
Radiation source: fine-focus sealed tube1862 reflections with I > 2σ(I)
graphiteRint = 0.021
φ and ω scansθmax = 26.4°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −7→7
Tmin = 0.860, Tmax = 0.884k = −15→21
6141 measured reflectionsl = −11→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.103H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0573P)2 + 0.3256P] where P = (Fo2 + 2Fc2)/3
2220 reflections(Δ/σ)max = 0.001
136 parametersΔρmax = 0.30 e Å3
0 restraintsΔρmin = −0.34 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl1−0.27073 (11)0.02267 (4)0.65605 (6)0.0705 (2)
S10.70384 (10)0.09234 (4)1.21031 (5)0.0588 (2)
S20.07788 (10)0.10824 (3)0.56567 (5)0.05097 (18)
N10.4957 (3)0.15672 (9)0.99768 (14)0.0389 (4)
N20.3327 (3)0.18765 (11)1.15862 (15)0.0466 (4)
N30.3408 (4)0.18457 (14)1.38596 (19)0.0669 (6)
N40.0452 (3)0.11665 (10)0.79535 (15)0.0410 (4)
C10.8149 (4)0.07222 (18)1.0769 (2)0.0660 (7)
H1A0.97240.08731.09750.079*
H1B0.80340.01591.05710.079*
C20.6843 (4)0.11841 (17)0.9667 (2)0.0631 (7)
H2A0.78010.15830.94400.076*
H2B0.62960.08340.89420.076*
C30.4872 (3)0.15132 (11)1.11773 (17)0.0370 (4)
C40.3448 (4)0.18300 (13)1.2819 (2)0.0478 (5)
C50.3492 (3)0.20877 (12)0.90364 (17)0.0426 (4)
H5A0.43940.24990.87900.051*
H5B0.24280.23460.94170.051*
C60.2233 (3)0.16430 (11)0.78796 (17)0.0378 (4)
C70.2661 (4)0.16624 (12)0.67255 (17)0.0451 (5)
H70.38180.19510.65410.054*
C8−0.0433 (3)0.08538 (11)0.68491 (19)0.0428 (4)
U11U22U33U12U13U23
Cl10.0659 (4)0.0730 (4)0.0743 (4)−0.0187 (3)0.0221 (3)−0.0253 (3)
S10.0642 (4)0.0707 (4)0.0407 (3)0.0175 (3)0.0133 (3)0.0086 (3)
S20.0674 (4)0.0577 (3)0.0290 (3)0.0066 (3)0.0152 (2)−0.0030 (2)
N10.0391 (8)0.0492 (9)0.0307 (8)0.0022 (7)0.0131 (6)−0.0022 (7)
N20.0483 (9)0.0586 (10)0.0382 (9)0.0007 (8)0.0208 (7)−0.0049 (7)
N30.0869 (15)0.0758 (14)0.0499 (11)−0.0106 (11)0.0390 (11)−0.0082 (10)
N40.0470 (9)0.0462 (9)0.0335 (8)0.0025 (7)0.0174 (7)−0.0024 (7)
C10.0546 (13)0.0878 (18)0.0591 (14)0.0197 (13)0.0218 (11)0.0030 (13)
C20.0664 (15)0.0811 (17)0.0517 (13)0.0266 (13)0.0328 (12)0.0063 (12)
C30.0369 (9)0.0420 (10)0.0328 (9)−0.0068 (8)0.0108 (7)−0.0030 (7)
C40.0526 (12)0.0519 (12)0.0465 (12)−0.0061 (9)0.0264 (9)−0.0056 (9)
C50.0517 (11)0.0417 (10)0.0356 (9)0.0012 (8)0.0140 (8)−0.0005 (8)
C60.0448 (10)0.0398 (10)0.0310 (9)0.0074 (8)0.0141 (7)0.0027 (7)
C70.0549 (12)0.0498 (11)0.0345 (10)0.0026 (9)0.0191 (9)0.0019 (8)
C80.0470 (10)0.0435 (10)0.0397 (10)0.0051 (8)0.0149 (8)−0.0041 (8)
Cl1—C81.715 (2)N4—C61.380 (2)
S1—C31.7471 (19)C1—C21.472 (3)
S1—C11.801 (2)C1—H1A0.97
S2—C71.709 (2)C1—H1B0.97
S2—C81.711 (2)C2—H2A0.97
N1—C31.328 (2)C2—H2B0.97
N1—C21.448 (3)C5—C61.490 (3)
N1—C51.459 (2)C5—H5A0.97
N2—C31.309 (2)C5—H5B0.97
N2—C41.328 (3)C6—C71.355 (3)
N3—C41.142 (3)C7—H70.93
N4—C81.291 (2)
C3—S1—C192.29 (10)N2—C3—N1122.18 (17)
C7—S2—C888.08 (10)N2—C3—S1125.57 (14)
C3—N1—C2116.74 (17)N1—C3—S1112.25 (14)
C3—N1—C5123.40 (16)N3—C4—N2173.6 (3)
C2—N1—C5119.09 (15)N1—C5—C6111.98 (15)
C3—N2—C4118.19 (18)N1—C5—H5A109.2
C8—N4—C6108.81 (16)C6—C5—H5A109.2
C2—C1—S1108.40 (16)N1—C5—H5B109.2
C2—C1—H1A110.0C6—C5—H5B109.2
S1—C1—H1A110.0H5A—C5—H5B107.9
C2—C1—H1B110.0C7—C6—N4115.37 (17)
S1—C1—H1B110.0C7—C6—C5125.85 (19)
H1A—C1—H1B108.4N4—C6—C5118.78 (16)
N1—C2—C1109.89 (18)C6—C7—S2110.57 (16)
N1—C2—H2A109.7C6—C7—H7124.7
C1—C2—H2A109.7S2—C7—H7124.7
N1—C2—H2B109.7N4—C8—S2117.15 (16)
C1—C2—H2B109.7N4—C8—Cl1122.55 (16)
H2A—C2—H2B108.2S2—C8—Cl1120.29 (12)
C3—S1—C1—C24.2 (2)C3—N1—C5—C6−124.90 (19)
C3—N1—C2—C16.9 (3)C2—N1—C5—C665.5 (2)
C5—N1—C2—C1177.2 (2)C8—N4—C6—C7−1.2 (2)
S1—C1—C2—N1−6.7 (3)C8—N4—C6—C5178.42 (17)
C4—N2—C3—N1−175.95 (18)N1—C5—C6—C7−106.0 (2)
C4—N2—C3—S13.3 (3)N1—C5—C6—N474.4 (2)
C2—N1—C3—N2175.7 (2)N4—C6—C7—S20.9 (2)
C5—N1—C3—N25.9 (3)C5—C6—C7—S2−178.68 (15)
C2—N1—C3—S1−3.7 (2)C8—S2—C7—C6−0.28 (16)
C5—N1—C3—S1−173.46 (14)C6—N4—C8—S21.0 (2)
C1—S1—C3—N2−179.83 (19)C6—N4—C8—Cl1−179.65 (14)
C1—S1—C3—N1−0.49 (17)C7—S2—C8—N4−0.42 (17)
C3—N2—C4—N3167 (2)C7—S2—C8—Cl1−179.83 (14)
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