Literature DB >> 21587416

Di-μ-azido-bis-({N'-[1-(2-pyrid-yl-κN)ethyl-idene]acetohydrazidato-κN',O}dicopper(II)).

Amitabha Datta1, Kuheli Das, Yan-Ming Jhou, Jui-Hsien Huang, Hon Man Lee.   

Abstract

The dimeric title compound, [Cu(2)(C(9)H(10)N(3)O)(2)(N(3))(2)], is located on a crystallographic inversion center. The Cu atom is coordinated by a tridentate anionic hydrazone ligand and two bridging azide ligands in a distorted square-pyramidal coordination geometry. The non-bonding CuCu distance is 3.238 (1) Å. Non-classical inter-molecular C-H⋯N hydrogen bonds link the dimers into chains along the c axis.

Entities:  

Year:  2010        PMID: 21587416      PMCID: PMC2983124          DOI: 10.1107/S1600536810034860

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related dimeric copper(II) complexes with similar tridentate ligands, see: Recio Despaigne et al. (2009 ▶); Sen et al. (2007 ▶); Patole et al. (2003 ▶).

Experimental

Crystal data

[Cu2(C9H10N3O)2(N3)2] M = 563.54 Triclinic, a = 7.589 (3) Å b = 8.955 (3) Å c = 9.693 (4) Å α = 66.534 (15)° β = 69.461 (13)° γ = 81.468 (16)° V = 565.8 (4) Å3 Z = 1 Mo Kα radiation μ = 1.92 mm−1 T = 150 K 0.25 × 0.20 × 0.20 mm

Data collection

Bruker SMART APEXII diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2003 ▶) T min = 0.645, T max = 0.700 3858 measured reflections 2358 independent reflections 1591 reflections with I > 2σ R int = 0.040

Refinement

R[F 2 > 2σ(F 2)] = 0.027 wR(F 2) = 0.093 S = 1.08 2358 reflections 156 parameters H-atom parameters constrained Δρmax = 2.08 e Å−3 Δρmin = −2.81 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: DIAMOND (Brandenburg, 2006 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810034860/pv2324sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810034860/pv2324Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu2(C9H10N3O)2(N3)2]Z = 1
Mr = 563.54F(000) = 286
Triclinic, P1Dx = 1.654 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.589 (3) ÅCell parameters from 3185 reflections
b = 8.955 (3) Åθ = 2.9–28.5°
c = 9.693 (4) ŵ = 1.92 mm1
α = 66.534 (15)°T = 150 K
β = 69.461 (13)°Prism, brown
γ = 81.468 (16)°0.25 × 0.20 × 0.20 mm
V = 565.8 (4) Å3
Bruker SMART APEXII diffractometer2358 independent reflections
Radiation source: fine-focus sealed tube1591 reflections with I > 2σ
graphiteRint = 0.040
ω scansθmax = 27.0°, θmin = 3.1°
Absorption correction: multi-scan (SADABS; Sheldrick, 2003)h = −9→9
Tmin = 0.645, Tmax = 0.700k = −11→10
3858 measured reflectionsl = −12→12
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.027Hydrogen site location: difference Fourier map
wR(F2) = 0.093H-atom parameters constrained
S = 1.08w = 1/[σ2(Fo2) + (0.0597P)2] where P = (Fo2 + 2Fc2)/3
2358 reflections(Δ/σ)max = 0.001
156 parametersΔρmax = 2.08 e Å3
0 restraintsΔρmin = −2.81 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.34274 (3)0.93665 (3)0.95880 (3)0.02989 (14)
N50.2011 (2)0.7390 (2)1.0402 (2)0.0307 (5)
O10.4938 (2)0.8357 (2)0.8052 (2)0.0380 (5)
N10.4648 (3)1.1498 (2)0.8642 (2)0.0329 (5)
N60.2719 (3)0.6294 (3)0.9663 (2)0.0367 (6)
C80.4270 (3)0.6937 (3)0.8443 (3)0.0314 (6)
N20.5605 (3)1.2073 (2)0.7250 (2)0.0358 (6)
N40.1206 (2)0.9791 (2)1.1350 (2)0.0315 (5)
C1−0.0012 (3)0.8504 (3)1.2187 (3)0.0341 (6)
C2−0.1553 (3)0.8504 (4)1.3488 (3)0.0438 (8)
H2−0.24040.76191.40360.053*
C90.5264 (3)0.5944 (3)0.7465 (3)0.0436 (7)
H9A0.49380.63570.64830.065*
H9B0.48810.48060.80670.065*
H9C0.66270.60190.72020.065*
C50.0911 (3)1.1048 (3)1.1831 (3)0.0390 (7)
H50.17581.19351.12540.047*
C60.0467 (3)0.7153 (3)1.1593 (3)0.0351 (7)
C3−0.1850 (3)0.9815 (4)1.3992 (3)0.0470 (9)
H3−0.28880.98251.48910.056*
C4−0.0596 (4)1.1095 (4)1.3148 (3)0.0449 (7)
H4−0.07611.19971.34650.054*
N30.6520 (4)1.2683 (4)0.5959 (3)0.0644 (10)
C7−0.0748 (4)0.5681 (4)1.2321 (4)0.0564 (10)
H7A−0.04110.50991.15940.085*
H7B−0.20730.60221.25160.085*
H7C−0.05560.49621.33280.085*
U11U22U33U12U13U23
Cu10.03078 (16)0.0297 (2)0.02843 (18)−0.00779 (10)−0.00486 (12)−0.01154 (14)
N50.0319 (7)0.0317 (10)0.0289 (9)−0.0042 (7)−0.0062 (7)−0.0133 (8)
O10.0400 (8)0.0382 (10)0.0350 (9)−0.0100 (6)−0.0044 (7)−0.0163 (8)
N10.0386 (8)0.0306 (10)0.0287 (9)−0.0063 (7)−0.0068 (8)−0.0117 (9)
N60.0383 (9)0.0368 (11)0.0351 (10)−0.0048 (8)−0.0079 (9)−0.0154 (9)
C80.0389 (9)0.0296 (11)0.0318 (10)−0.0017 (8)−0.0140 (9)−0.0148 (9)
N20.0404 (9)0.0327 (10)0.0316 (10)−0.0034 (7)−0.0105 (8)−0.0091 (9)
N40.0303 (7)0.0331 (10)0.0310 (9)−0.0027 (6)−0.0079 (7)−0.0126 (8)
C10.0286 (8)0.0403 (12)0.0295 (11)−0.0040 (7)−0.0073 (8)−0.0098 (10)
C20.0346 (10)0.0535 (16)0.0353 (12)−0.0070 (9)−0.0012 (9)−0.0150 (13)
C90.0495 (12)0.0421 (15)0.0402 (13)−0.0022 (10)−0.0097 (11)−0.0200 (12)
C50.0395 (10)0.0399 (14)0.0386 (12)−0.0032 (9)−0.0109 (10)−0.0162 (12)
C60.0323 (9)0.0352 (12)0.0343 (11)−0.0074 (8)−0.0070 (9)−0.0102 (10)
C30.0388 (10)0.0623 (19)0.0358 (13)0.0030 (10)−0.0028 (10)−0.0234 (14)
C40.0484 (12)0.0489 (16)0.0437 (14)0.0071 (10)−0.0130 (11)−0.0277 (12)
N30.0746 (16)0.0654 (19)0.0323 (12)−0.0125 (13)−0.0042 (12)−0.0045 (14)
C70.0493 (13)0.0495 (18)0.0599 (19)−0.0198 (12)0.0053 (13)−0.0229 (16)
Cu1—N51.941 (2)C1—C61.484 (4)
Cu1—N11.969 (2)C2—C31.403 (5)
Cu1—O11.979 (2)C2—H20.9500
Cu1—N42.051 (2)C9—H9A0.9800
Cu1—N1i2.4574 (18)C9—H9B0.9800
N5—C61.297 (3)C9—H9C0.9800
N5—N61.377 (4)C5—C41.394 (4)
O1—C81.300 (3)C5—H50.9500
N1—N21.218 (3)C6—C71.500 (3)
N1—Cu1i2.4574 (18)C3—C41.386 (4)
N6—C81.341 (3)C3—H30.9500
C8—C91.493 (5)C4—H40.9500
N2—N31.142 (3)C7—H7A0.9800
N4—C51.343 (4)C7—H7B0.9800
N4—C11.374 (3)C7—H7C0.9800
C1—C21.387 (4)
N5—Cu1—N1173.44 (6)C1—C2—C3119.8 (2)
N5—Cu1—O179.78 (9)C1—C2—H2120.1
N1—Cu1—O1101.14 (9)C3—C2—H2120.1
N5—Cu1—N480.27 (9)C8—C9—H9A109.5
N1—Cu1—N498.12 (10)C8—C9—H9B109.5
O1—Cu1—N4159.42 (8)H9A—C9—H9B109.5
N5—Cu1—N1i99.67 (7)C8—C9—H9C109.5
N1—Cu1—N1i86.64 (6)H9A—C9—H9C109.5
O1—Cu1—N1i98.75 (8)H9B—C9—H9C109.5
N4—Cu1—N1i89.51 (8)N4—C5—C4122.3 (2)
C6—N5—N6123.0 (2)N4—C5—H5118.9
C6—N5—Cu1119.7 (2)C4—C5—H5118.9
N6—N5—Cu1117.28 (14)N5—C6—C1113.21 (19)
C8—O1—Cu1110.27 (16)N5—C6—C7124.6 (3)
N2—N1—Cu1122.4 (2)C1—C6—C7122.2 (3)
N2—N1—Cu1i111.79 (13)C4—C3—C2118.5 (3)
Cu1—N1—Cu1i93.36 (6)C4—C3—H3120.7
C8—N6—N5107.9 (2)C2—C3—H3120.7
O1—C8—N6124.6 (3)C3—C4—C5119.4 (3)
O1—C8—C9118.6 (2)C3—C4—H4120.3
N6—C8—C9116.8 (2)C5—C4—H4120.3
N3—N2—N1176.3 (3)C6—C7—H7A109.5
C5—N4—C1119.0 (2)C6—C7—H7B109.5
C5—N4—Cu1128.98 (15)H7A—C7—H7B109.5
C1—N4—Cu1111.8 (2)C6—C7—H7C109.5
N4—C1—C2121.1 (3)H7A—C7—H7C109.5
N4—C1—C6114.9 (2)H7B—C7—H7C109.5
C2—C1—C6124.0 (2)
D—H···AD—HH···AD···AD—H···A
C9—H9A···N3ii0.982.743.710 (4)171
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C9—H9A⋯N3i0.982.743.710 (4)171

Symmetry code: (i) .

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