Literature DB >> 21586753

Shared molecular strategies of the malaria parasite P. falciparum and the human virus HIV-1.

Stefan Wuchty1, Geoffrey H Siwo, Michael T Ferdig.   

Abstract

We augmented existing computationally predicted and experimentally determined interactions with evolutionarily conserved interactions between proteins of the malaria parasite, P. falciparum, and the human host. In a validation step, we found that conserved interacting host-parasite protein pairs were specifically expressed in host tissues where both the parasite and host proteins are known to be active. We compared host-parasite interactions with experimentally verified interactions between human host proteins and a very different pathogen, HIV-1. Both pathogens were found to use their protein repertoire in a combinatorial manner, providing a broad connection to host cellular processes. Specifically, the two biologically distinct pathogens predominately target central proteins to take control of a human host cell, effectively reaching into diversified cellular host cellular functions. Interacting signaling pathways and a small set of regulatory and signaling proteins were prime targets of both pathogens, suggesting remarkably similar patterns of host-pathogen interactions despite the vast biological differences of both pathogens. Such an identification of shared molecular strategies by the virus HIV-1 and the eukaryotic intracellular pathogen P. falciparum may allow us to illuminate new avenues of disease intervention.

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Year:  2011        PMID: 21586753      PMCID: PMC3205867          DOI: 10.1074/mcp.M111.009035

Source DB:  PubMed          Journal:  Mol Cell Proteomics        ISSN: 1535-9476            Impact factor:   5.911


  45 in total

Review 1.  The human red blood cell proteome and interactome.

Authors:  Steven R Goodman; Anastasia Kurdia; Larry Ammann; David Kakhniashvili; Ovidiu Daescu
Journal:  Exp Biol Med (Maywood)       Date:  2007-12

2.  Epstein-Barr virus and virus human protein interaction maps.

Authors:  Michael A Calderwood; Kavitha Venkatesan; Li Xing; Michael R Chase; Alexei Vazquez; Amy M Holthaus; Alexandra E Ewence; Ning Li; Tomoko Hirozane-Kishikawa; David E Hill; Marc Vidal; Elliott Kieff; Eric Johannsen
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-19       Impact factor: 11.205

3.  Host pathogen protein interactions predicted by comparative modeling.

Authors:  Fred P Davis; David T Barkan; Narayanan Eswar; James H McKerrow; Andrej Sali
Journal:  Protein Sci       Date:  2007-10-26       Impact factor: 6.725

4.  Characterization and prediction of protein-protein interactions within and between complexes.

Authors:  Einat Sprinzak; Yael Altuvia; Hanah Margalit
Journal:  Proc Natl Acad Sci U S A       Date:  2006-09-26       Impact factor: 11.205

5.  Computational prediction of host-pathogen protein-protein interactions.

Authors:  Matthew D Dyer; T M Murali; Bruno W Sobral
Journal:  Bioinformatics       Date:  2007-07-01       Impact factor: 6.937

6.  IntAct--open source resource for molecular interaction data.

Authors:  S Kerrien; Y Alam-Faruque; B Aranda; I Bancarz; A Bridge; C Derow; E Dimmer; M Feuermann; A Friedrichsen; R Huntley; C Kohler; J Khadake; C Leroy; A Liban; C Lieftink; L Montecchi-Palazzi; S Orchard; J Risse; K Robbe; B Roechert; D Thorneycroft; Y Zhang; R Apweiler; H Hermjakob
Journal:  Nucleic Acids Res       Date:  2006-12-01       Impact factor: 16.971

7.  MINT: the Molecular INTeraction database.

Authors:  Andrew Chatr-aryamontri; Arnaud Ceol; Luisa Montecchi Palazzi; Giuliano Nardelli; Maria Victoria Schneider; Luisa Castagnoli; Gianni Cesareni
Journal:  Nucleic Acids Res       Date:  2006-11-29       Impact factor: 16.971

8.  Comprehensive curation and analysis of global interaction networks in Saccharomyces cerevisiae.

Authors:  Teresa Reguly; Ashton Breitkreutz; Lorrie Boucher; Bobby-Joe Breitkreutz; Nizar N Batada; Gary C Hon; Chad L Myers; Ainslie Parsons; Helena Friesen; Rose Oughtred; Amy Tong; Chris Stark; Yuen Ho; David Botstein; Brenda Andrews; Charles Boone; Olga G Troyanskya; Trey Ideker; Kara Dolinski; Mike Tyers
Journal:  J Biol       Date:  2006-06-08

9.  Large-scale mapping of human protein-protein interactions by mass spectrometry.

Authors:  Rob M Ewing; Peter Chu; Fred Elisma; Hongyan Li; Paul Taylor; Shane Climie; Linda McBroom-Cerajewski; Mark D Robinson; Liam O'Connor; Michael Li; Rod Taylor; Moyez Dharsee; Yuen Ho; Adrian Heilbut; Lynda Moore; Shudong Zhang; Olga Ornatsky; Yury V Bukhman; Martin Ethier; Yinglun Sheng; Julian Vasilescu; Mohamed Abu-Farha; Jean-Philippe Lambert; Henry S Duewel; Ian I Stewart; Bonnie Kuehl; Kelly Hogue; Karen Colwill; Katharine Gladwish; Brenda Muskat; Robert Kinach; Sally-Lin Adams; Michael F Moran; Gregg B Morin; Thodoros Topaloglou; Daniel Figeys
Journal:  Mol Syst Biol       Date:  2007-03-13       Impact factor: 11.429

Review 10.  Systems biology and the host response to viral infection.

Authors:  Seng-Lai Tan; Gopinath Ganji; Bryan Paeper; Sean Proll; Michael G Katze
Journal:  Nat Biotechnol       Date:  2007-12       Impact factor: 54.908

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  6 in total

1.  Controllability in protein interaction networks.

Authors:  Stefan Wuchty
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-28       Impact factor: 11.205

2.  The protein interaction network of bacteriophage lambda with its host, Escherichia coli.

Authors:  Sonja Blasche; Stefan Wuchty; Seesandra V Rajagopala; Peter Uetz
Journal:  J Virol       Date:  2013-09-18       Impact factor: 5.103

3.  The interactome of Streptococcus pneumoniae and its bacteriophages show highly specific patterns of interactions among bacteria and their phages.

Authors:  Rachelle Mariano; Stefan Wuchty; Maria G Vizoso-Pinto; Roman Häuser; Peter Uetz
Journal:  Sci Rep       Date:  2016-04-22       Impact factor: 4.379

4.  Beyond degree and betweenness centrality: Alternative topological measures to predict viral targets.

Authors:  Prajwal Devkota; Matt C Danzi; Stefan Wuchty
Journal:  PLoS One       Date:  2018-05-24       Impact factor: 3.240

5.  An Integrative Computational Approach for the Prediction of Human-Plasmodium Protein-Protein Interactions.

Authors:  Kais Ghedira; Yosr Hamdi; Abir El Béji; Houcemeddine Othman
Journal:  Biomed Res Int       Date:  2020-12-19       Impact factor: 3.411

6.  Local Action with Global Impact: Highly Similar Infection Patterns of Human Viruses and Bacteriophages.

Authors:  Rachelle Mariano; Sawsan Khuri; Peter Uetz; Stefan Wuchty
Journal:  mSystems       Date:  2016-03-08       Impact factor: 6.496

  6 in total

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