| Literature DB >> 21584023 |
Xiao He, Gui-Rong Qu, Dongsheng Deng, Baoming Ji.
Abstract
In the title compound, C(16)H(10)N(4)O(4), the two pyridine rings are twisted by 44.41 (2)° and the ester groups form dihedral angles of 48.77 (4) and 45.75 (2)° with the corresponding pyridine rings. The crystal structure is stabilized by inter-molecular C-H⋯O hydrogen bonds and π-π stacking inter-actions between the pyridine rings [centroid-to-centroid distance 3.797 (2) Å].Entities:
Year: 2009 PMID: 21584023 PMCID: PMC2977680 DOI: 10.1107/S1600536809012446
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H10N4O4 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 2697 reflections | |
| θ = 2.4–25.5° | |
| µ = 0.10 mm−1 | |
| α = 109.148 (4)° | |
| β = 106.091 (3)° | Block, yellow |
| γ = 100.404 (5)° | 0.49 × 0.45 × 0.41 mm |
| Bruker APEXII CCD diffractometer | 2845 independent reflections |
| Radiation source: fine-focus sealed tube | 2391 reflections with |
| graphite | |
| Detector resolution: 0 pixels mm-1 | θmax = 25.5°, θmin = 2.4° |
| phi and ω scans | |
| Absorption correction: multi-scan ( | |
| 5613 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 2845 reflections | Δρmax = 0.15 e Å−3 |
| 218 parameters | Δρmin = −0.11 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.044 (4) |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| N1 | 0.24082 (14) | 0.31796 (12) | 0.50125 (12) | 0.0430 (3) | |
| N2 | 0.10699 (15) | −0.04177 (12) | 0.29318 (12) | 0.0441 (3) | |
| N3 | 0.2207 (3) | 0.64855 (17) | 0.68504 (19) | 0.0880 (5) | |
| N4 | −0.1464 (3) | −0.37966 (17) | 0.06250 (18) | 0.0918 (6) | |
| O1 | 0.21123 (14) | 0.07920 (12) | 0.04429 (10) | 0.0584 (3) | |
| O3 | 0.39330 (14) | 0.18868 (11) | 0.78250 (10) | 0.0537 (3) | |
| O4 | 0.55513 (13) | 0.24358 (11) | 0.65966 (11) | 0.0589 (3) | |
| O2 | 0.41072 (15) | 0.03548 (12) | 0.20273 (11) | 0.0611 (3) | |
| C2 | 0.28278 (17) | 0.22264 (15) | 0.28064 (14) | 0.0425 (3) | |
| C1 | 0.25460 (16) | 0.20947 (14) | 0.39931 (14) | 0.0392 (3) | |
| C12 | 0.30974 (18) | 0.10132 (15) | 0.17406 (14) | 0.0448 (3) | |
| C3 | 0.2918 (2) | 0.35319 (16) | 0.26803 (16) | 0.0520 (4) | |
| H3A | 0.3070 | 0.3642 | 0.1892 | 0.062* | |
| C4 | 0.2783 (2) | 0.46654 (16) | 0.37267 (17) | 0.0534 (4) | |
| H4A | 0.2850 | 0.5553 | 0.3668 | 0.064* | |
| C5 | 0.25452 (18) | 0.44348 (14) | 0.48638 (16) | 0.0461 (3) | |
| C11 | 0.2373 (2) | 0.55804 (17) | 0.59939 (19) | 0.0585 (4) | |
| C15 | 0.2181 (3) | −0.0415 (2) | −0.06874 (17) | 0.0693 (5) | |
| H15A | 0.1425 | −0.0479 | −0.1578 | 0.104* | |
| H15B | 0.1782 | −0.1288 | −0.0572 | 0.104* | |
| H15C | 0.3381 | −0.0277 | −0.0661 | 0.104* | |
| C9 | 0.10581 (18) | −0.19269 (14) | 0.42201 (15) | 0.0448 (3) | |
| H9A | 0.0618 | −0.2823 | 0.4223 | 0.054* | |
| C7 | 0.28339 (16) | 0.05361 (13) | 0.54006 (13) | 0.0379 (3) | |
| C6 | 0.21790 (16) | 0.06783 (13) | 0.41195 (14) | 0.0382 (3) | |
| C8 | 0.22261 (18) | −0.07911 (14) | 0.54392 (15) | 0.0432 (3) | |
| H8A | 0.2603 | −0.0914 | 0.6280 | 0.052* | |
| C10 | 0.05610 (17) | −0.16976 (14) | 0.29983 (14) | 0.0436 (3) | |
| C14 | 0.42572 (18) | 0.17362 (14) | 0.66546 (14) | 0.0416 (3) | |
| C13 | −0.0581 (2) | −0.28668 (17) | 0.16696 (18) | 0.0595 (4) | |
| C16 | 0.5312 (3) | 0.2948 (2) | 0.91195 (18) | 0.0781 (6) | |
| H16D | 0.4957 | 0.2978 | 0.9904 | 0.117* | |
| H16A | 0.5497 | 0.3878 | 0.9077 | 0.117* | |
| H16B | 0.6398 | 0.2692 | 0.9235 | 0.117* |
| N1 | 0.0426 (6) | 0.0382 (6) | 0.0467 (7) | 0.0097 (5) | 0.0153 (5) | 0.0172 (5) |
| N2 | 0.0445 (6) | 0.0400 (6) | 0.0427 (7) | 0.0101 (5) | 0.0113 (5) | 0.0153 (5) |
| N3 | 0.1169 (15) | 0.0572 (10) | 0.0928 (13) | 0.0325 (10) | 0.0510 (11) | 0.0193 (9) |
| N4 | 0.0980 (13) | 0.0583 (10) | 0.0702 (11) | 0.0005 (9) | 0.0005 (10) | 0.0035 (9) |
| O1 | 0.0661 (7) | 0.0712 (7) | 0.0413 (6) | 0.0318 (6) | 0.0166 (5) | 0.0232 (5) |
| O3 | 0.0612 (6) | 0.0478 (6) | 0.0391 (5) | 0.0067 (5) | 0.0151 (5) | 0.0092 (5) |
| O4 | 0.0460 (6) | 0.0583 (7) | 0.0626 (7) | 0.0006 (5) | 0.0143 (5) | 0.0246 (6) |
| O2 | 0.0594 (7) | 0.0714 (7) | 0.0530 (6) | 0.0332 (6) | 0.0153 (5) | 0.0225 (6) |
| C2 | 0.0385 (7) | 0.0450 (8) | 0.0438 (8) | 0.0108 (6) | 0.0120 (6) | 0.0209 (6) |
| C1 | 0.0361 (7) | 0.0385 (7) | 0.0406 (7) | 0.0093 (5) | 0.0106 (5) | 0.0167 (6) |
| C12 | 0.0417 (7) | 0.0506 (8) | 0.0437 (8) | 0.0114 (6) | 0.0155 (6) | 0.0220 (7) |
| C3 | 0.0543 (9) | 0.0559 (9) | 0.0567 (9) | 0.0159 (7) | 0.0229 (7) | 0.0335 (8) |
| C4 | 0.0556 (9) | 0.0434 (8) | 0.0701 (10) | 0.0160 (7) | 0.0239 (8) | 0.0317 (8) |
| C5 | 0.0422 (7) | 0.0380 (7) | 0.0571 (9) | 0.0109 (6) | 0.0168 (6) | 0.0191 (7) |
| C11 | 0.0652 (10) | 0.0415 (9) | 0.0706 (11) | 0.0165 (7) | 0.0269 (8) | 0.0225 (8) |
| C15 | 0.0746 (11) | 0.0858 (13) | 0.0416 (9) | 0.0346 (10) | 0.0174 (8) | 0.0161 (9) |
| C9 | 0.0437 (7) | 0.0360 (7) | 0.0567 (9) | 0.0096 (6) | 0.0208 (6) | 0.0200 (7) |
| C7 | 0.0376 (7) | 0.0376 (7) | 0.0402 (7) | 0.0117 (5) | 0.0162 (6) | 0.0158 (6) |
| C6 | 0.0380 (7) | 0.0369 (7) | 0.0406 (7) | 0.0111 (5) | 0.0149 (6) | 0.0159 (6) |
| C8 | 0.0467 (7) | 0.0426 (8) | 0.0448 (8) | 0.0132 (6) | 0.0183 (6) | 0.0216 (6) |
| C10 | 0.0396 (7) | 0.0370 (7) | 0.0463 (8) | 0.0083 (6) | 0.0119 (6) | 0.0118 (6) |
| C14 | 0.0433 (7) | 0.0370 (7) | 0.0442 (8) | 0.0128 (6) | 0.0135 (6) | 0.0175 (6) |
| C13 | 0.0613 (10) | 0.0434 (9) | 0.0568 (10) | 0.0070 (7) | 0.0098 (8) | 0.0136 (8) |
| C16 | 0.0843 (13) | 0.0666 (11) | 0.0445 (10) | 0.0064 (10) | 0.0046 (9) | −0.0007 (9) |
| N1—C1 | 1.3328 (17) | C4—C5 | 1.378 (2) |
| N1—C5 | 1.3430 (18) | C4—H4A | 0.9300 |
| N2—C6 | 1.3322 (17) | C5—C11 | 1.451 (2) |
| N2—C10 | 1.3406 (18) | C15—H15A | 0.9600 |
| N3—C11 | 1.136 (2) | C15—H15B | 0.9600 |
| N4—C13 | 1.139 (2) | C15—H15C | 0.9600 |
| O1—C12 | 1.3252 (17) | C9—C10 | 1.376 (2) |
| O1—C15 | 1.4495 (19) | C9—C8 | 1.3786 (19) |
| O3—C14 | 1.3249 (17) | C9—H9A | 0.9300 |
| O3—C16 | 1.4483 (19) | C7—C8 | 1.3864 (19) |
| O4—C14 | 1.1999 (16) | C7—C6 | 1.4011 (18) |
| O2—C12 | 1.1997 (17) | C7—C14 | 1.4913 (19) |
| C2—C3 | 1.386 (2) | C8—H8A | 0.9300 |
| C2—C1 | 1.4038 (19) | C10—C13 | 1.447 (2) |
| C2—C12 | 1.492 (2) | C16—H16D | 0.9600 |
| C1—C6 | 1.4942 (19) | C16—H16A | 0.9600 |
| C3—C4 | 1.378 (2) | C16—H16B | 0.9600 |
| C3—H3A | 0.9300 | ||
| C1—N1—C5 | 117.06 (12) | H15A—C15—H15C | 109.5 |
| C6—N2—C10 | 117.28 (12) | H15B—C15—H15C | 109.5 |
| C12—O1—C15 | 116.20 (12) | C10—C9—C8 | 118.15 (12) |
| C14—O3—C16 | 115.67 (13) | C10—C9—H9A | 120.9 |
| C3—C2—C1 | 118.21 (13) | C8—C9—H9A | 120.9 |
| C3—C2—C12 | 120.91 (12) | C8—C7—C6 | 118.08 (12) |
| C1—C2—C12 | 120.83 (12) | C8—C7—C14 | 120.67 (12) |
| N1—C1—C2 | 122.74 (12) | C6—C7—C14 | 121.05 (11) |
| N1—C1—C6 | 115.11 (11) | N2—C6—C7 | 122.92 (12) |
| C2—C1—C6 | 121.83 (12) | N2—C6—C1 | 114.08 (11) |
| O2—C12—O1 | 124.85 (14) | C7—C6—C1 | 122.83 (12) |
| O2—C12—C2 | 124.19 (13) | C9—C8—C7 | 119.38 (13) |
| O1—C12—C2 | 110.93 (12) | C9—C8—H8A | 120.3 |
| C4—C3—C2 | 119.75 (13) | C7—C8—H8A | 120.3 |
| C4—C3—H3A | 120.1 | N2—C10—C9 | 124.06 (12) |
| C2—C3—H3A | 120.1 | N2—C10—C13 | 115.18 (13) |
| C3—C4—C5 | 117.53 (13) | C9—C10—C13 | 120.76 (13) |
| C3—C4—H4A | 121.2 | O4—C14—O3 | 125.10 (13) |
| C5—C4—H4A | 121.2 | O4—C14—C7 | 123.42 (13) |
| N1—C5—C4 | 124.68 (13) | O3—C14—C7 | 111.43 (11) |
| N1—C5—C11 | 115.08 (13) | N4—C13—C10 | 179.1 (2) |
| C4—C5—C11 | 120.23 (13) | O3—C16—H16D | 109.5 |
| N3—C11—C5 | 178.05 (19) | O3—C16—H16A | 109.5 |
| O1—C15—H15A | 109.5 | H16D—C16—H16A | 109.5 |
| O1—C15—H15B | 109.5 | O3—C16—H16B | 109.5 |
| H15A—C15—H15B | 109.5 | H16D—C16—H16B | 109.5 |
| O1—C15—H15C | 109.5 | H16A—C16—H16B | 109.5 |
| C5—N1—C1—C2 | 0.20 (19) | C8—C7—C6—N2 | −3.22 (19) |
| C5—N1—C1—C6 | −173.30 (11) | C14—C7—C6—N2 | 171.65 (12) |
| C3—C2—C1—N1 | −1.7 (2) | C8—C7—C6—C1 | 171.66 (11) |
| C12—C2—C1—N1 | 175.79 (12) | C14—C7—C6—C1 | −13.47 (18) |
| C3—C2—C1—C6 | 171.35 (12) | N1—C1—C6—N2 | 132.04 (13) |
| C12—C2—C1—C6 | −11.14 (19) | C2—C1—C6—N2 | −41.53 (17) |
| C15—O1—C12—O2 | 5.1 (2) | N1—C1—C6—C7 | −43.25 (17) |
| C15—O1—C12—C2 | −176.63 (12) | C2—C1—C6—C7 | 143.18 (13) |
| C3—C2—C12—O2 | 129.19 (16) | C10—C9—C8—C7 | 0.99 (19) |
| C1—C2—C12—O2 | −48.3 (2) | C6—C7—C8—C9 | 2.17 (19) |
| C3—C2—C12—O1 | −49.07 (17) | C14—C7—C8—C9 | −172.72 (12) |
| C1—C2—C12—O1 | 133.48 (13) | C6—N2—C10—C9 | 2.6 (2) |
| C1—C2—C3—C4 | 1.8 (2) | C6—N2—C10—C13 | −177.41 (12) |
| C12—C2—C3—C4 | −175.66 (13) | C8—C9—C10—N2 | −3.6 (2) |
| C2—C3—C4—C5 | −0.5 (2) | C8—C9—C10—C13 | 176.48 (13) |
| C1—N1—C5—C4 | 1.3 (2) | C16—O3—C14—O4 | −2.7 (2) |
| C1—N1—C5—C11 | 179.56 (13) | C16—O3—C14—C7 | 175.13 (13) |
| C3—C4—C5—N1 | −1.1 (2) | C8—C7—C14—O4 | 130.87 (15) |
| C3—C4—C5—C11 | −179.31 (14) | C6—C7—C14—O4 | −43.86 (19) |
| C10—N2—C6—C7 | 0.86 (19) | C8—C7—C14—O3 | −46.97 (16) |
| C10—N2—C6—C1 | −174.43 (11) | C6—C7—C14—O3 | 138.30 (12) |
| H··· | ||||
| C4—H4A···O4i | 0.93 | 2.39 | 3.222 (3) | 149 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C4—H4 | 0.93 | 2.39 | 3.222 (3) | 149 |
Symmetry code: (i) .