Literature DB >> 21584003

N-[3-(2-Methyl-phen-yl)isoquinolin-1-yl]formamide.

Fu Na Cui1, Jun Qi Li, Xiao Li Chen, Qing Bao Song.   

Abstract

The title compound, C(17)H(14)N(2)O, crystallizes as a cis formamide isomer. The isoquinoline and benzene fragments are nearly perpendicular [dihedral angle = 81.79 (18)°], whereas the formamide group is virtually coplanar with the isoquinoline unit [dihedral angle = 1.66 (15)°]. Inter-molecular N-H⋯O hydrogen bonds link mol-ecules into a centrosymmetric dimer.

Entities:  

Year:  2009        PMID: 21584003      PMCID: PMC2977660          DOI: 10.1107/S1600536809011714

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the cytotoxic activity of aryl­isoquinolines, see: Cho et al. (2002 ▶, 2003 ▶). For the synthethic procedures relevant to this work, see: Nunno et al. (2008 ▶); Tovar & Swager (1999 ▶); Cho et al. (2002 ▶).

Experimental

Crystal data

C17H14N2O M = 262.30 Triclinic, a = 5.3898 (14) Å b = 11.166 (3) Å c = 11.899 (3) Å α = 106.139 (3)° β = 93.128 (3)° γ = 103.800 (3)° V = 662.4 (3) Å3 Z = 2 Mo Kα radiation μ = 0.08 mm−1 T = 296 K 0.36 × 0.23 × 0.16 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.971, T max = 0.987 4772 measured reflections 2399 independent reflections 1575 reflections with I > 2σ(I) R int = 0.017

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.124 S = 1.03 2399 reflections 182 parameters H-atom parameters constrained Δρmax = 0.13 e Å−3 Δρmin = −0.19 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809011714/gk2201sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809011714/gk2201Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H14N2OZ = 2
Mr = 262.30F(000) = 276
Triclinic, P1Dx = 1.315 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 5.3898 (14) ÅCell parameters from 1222 reflections
b = 11.166 (3) Åθ = 3.0–26.0°
c = 11.899 (3) ŵ = 0.08 mm1
α = 106.139 (3)°T = 296 K
β = 93.128 (3)°Block, colourless
γ = 103.800 (3)°0.36 × 0.23 × 0.16 mm
V = 662.4 (3) Å3
Bruker SMART CCD area-detector diffractometer2399 independent reflections
Radiation source: fine-focus sealed tube1575 reflections with I > 2σ(I)
graphiteRint = 0.017
Detector resolution: 0 pixels mm-1θmax = 25.5°, θmin = 3.0°
φ and ω scansh = −6→6
Absorption correction: multi-scan (SADABS; Bruker, 2000)k = −13→13
Tmin = 0.971, Tmax = 0.987l = −14→14
4772 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.124H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0578P)2 + 0.0805P] where P = (Fo2 + 2Fc2)/3
2399 reflections(Δ/σ)max < 0.001
182 parametersΔρmax = 0.13 e Å3
0 restraintsΔρmin = −0.19 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)are estimated using the full covariance matrix. The cell e.s.d.'s are takeninto account individually in the estimation of e.s.d.'s in distances, anglesand torsion angles; correlations between e.s.d.'s in cell parameters are onlyused when they are defined by crystal symmetry. An approximate (isotropic)treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.2507 (3)0.67650 (17)0.71903 (14)0.0446 (4)
C20.1010 (3)0.74496 (17)0.67117 (15)0.0444 (4)
C4−0.0799 (4)0.8081 (2)0.51425 (18)0.0651 (6)
H4−0.10150.80320.43490.078*
C5−0.1976 (4)0.8866 (2)0.59439 (18)0.0627 (6)
H5−0.29590.93390.56810.075*
C6−0.1697 (4)0.8945 (2)0.71022 (18)0.0592 (5)
H6−0.25040.94650.76270.071*
C7−0.0188 (3)0.82420 (18)0.75214 (15)0.0481 (5)
C80.0201 (4)0.83123 (19)0.87248 (16)0.0550 (5)
H8−0.05860.88200.92720.066*
C90.1717 (4)0.76428 (18)0.90878 (15)0.0485 (5)
C100.5217 (4)0.52789 (19)0.67853 (16)0.0551 (5)
H100.54310.53460.75830.066*
C110.2307 (4)0.77304 (19)1.03607 (15)0.0479 (5)
C120.0620 (4)0.69894 (19)1.09041 (16)0.0531 (5)
C130.1360 (4)0.7069 (2)1.20679 (17)0.0623 (6)
H130.02610.65671.24370.075*
C140.3655 (4)0.7863 (2)1.26835 (18)0.0636 (6)
H140.41050.78891.34570.076*
C150.5290 (4)0.8620 (2)1.21612 (18)0.0662 (6)
H150.68310.91781.25840.079*
C160.4630 (4)0.8548 (2)1.09957 (17)0.0600 (6)
H160.57510.90511.06350.072*
C17−0.1907 (4)0.6097 (2)1.0258 (2)0.0735 (6)
H17A−0.30100.65961.00760.110*
H17B−0.27100.56021.07460.110*
H17C−0.16170.55240.95410.110*
C180.0666 (4)0.7385 (2)0.55094 (16)0.0558 (5)
H180.14410.68660.49660.067*
N10.2872 (3)0.68582 (15)0.83158 (12)0.0492 (4)
N20.3716 (3)0.59354 (15)0.64362 (12)0.0517 (4)
H20.34690.58440.56940.062*
O10.6325 (3)0.45974 (14)0.61283 (11)0.0655 (4)
U11U22U33U12U13U23
C10.0521 (11)0.0470 (11)0.0386 (10)0.0214 (9)0.0112 (8)0.0112 (8)
C20.0477 (10)0.0478 (11)0.0410 (10)0.0187 (9)0.0078 (8)0.0134 (8)
C40.0777 (15)0.0831 (16)0.0477 (11)0.0425 (13)0.0049 (10)0.0231 (11)
C50.0683 (13)0.0731 (15)0.0596 (12)0.0387 (12)0.0033 (10)0.0241 (11)
C60.0639 (13)0.0663 (14)0.0569 (12)0.0364 (11)0.0094 (10)0.0168 (10)
C70.0492 (11)0.0519 (12)0.0466 (10)0.0206 (9)0.0068 (8)0.0142 (9)
C80.0668 (13)0.0630 (13)0.0426 (10)0.0340 (11)0.0147 (9)0.0119 (9)
C90.0555 (11)0.0555 (12)0.0384 (10)0.0238 (10)0.0114 (8)0.0116 (9)
C100.0755 (14)0.0638 (13)0.0380 (10)0.0378 (12)0.0107 (9)0.0170 (9)
C110.0579 (12)0.0535 (11)0.0383 (9)0.0285 (10)0.0111 (9)0.0104 (9)
C120.0595 (12)0.0560 (12)0.0463 (11)0.0227 (10)0.0070 (9)0.0132 (9)
C130.0754 (15)0.0728 (15)0.0434 (11)0.0228 (12)0.0084 (10)0.0220 (10)
C140.0760 (15)0.0762 (15)0.0417 (11)0.0293 (13)0.0017 (11)0.0157 (11)
C150.0628 (13)0.0766 (15)0.0529 (12)0.0210 (12)−0.0034 (10)0.0094 (11)
C160.0576 (13)0.0731 (14)0.0484 (11)0.0181 (11)0.0083 (10)0.0159 (10)
C170.0690 (14)0.0802 (16)0.0671 (14)0.0124 (13)−0.0022 (11)0.0239 (12)
C180.0651 (13)0.0687 (14)0.0419 (10)0.0332 (11)0.0089 (9)0.0163 (10)
N10.0622 (10)0.0564 (10)0.0363 (8)0.0285 (8)0.0113 (7)0.0140 (7)
N20.0707 (11)0.0640 (10)0.0326 (8)0.0390 (9)0.0089 (7)0.0153 (7)
O10.0930 (11)0.0775 (10)0.0454 (7)0.0555 (9)0.0183 (7)0.0194 (7)
C1—N11.314 (2)C10—N21.334 (2)
C1—N21.406 (2)C10—H100.9300
C1—C21.430 (2)C11—C121.390 (3)
C2—C181.412 (2)C11—C161.393 (3)
C2—C71.412 (2)C12—C131.393 (3)
C4—C181.365 (3)C12—C171.500 (3)
C4—C51.395 (3)C13—C141.367 (3)
C4—H40.9300C13—H130.9300
C5—C61.354 (3)C14—C151.368 (3)
C5—H50.9300C14—H140.9300
C6—C71.416 (3)C15—C161.388 (3)
C6—H60.9300C15—H150.9300
C7—C81.413 (2)C16—H160.9300
C8—C91.358 (3)C17—H17A0.9600
C8—H80.9300C17—H17B0.9600
C9—N11.369 (2)C17—H17C0.9600
C9—C111.502 (2)C18—H180.9300
C10—O11.218 (2)N2—H20.8600
N1—C1—N2116.00 (15)C16—C11—C9118.94 (17)
N1—C1—C2124.34 (16)C11—C12—C13118.20 (19)
N2—C1—C2119.66 (15)C11—C12—C17121.62 (17)
C18—C2—C7118.91 (16)C13—C12—C17120.16 (19)
C18—C2—C1124.80 (16)C14—C13—C12121.9 (2)
C7—C2—C1116.28 (15)C14—C13—H13119.0
C18—C4—C5120.80 (19)C12—C13—H13119.0
C18—C4—H4119.6C13—C14—C15120.03 (19)
C5—C4—H4119.6C13—C14—H14120.0
C6—C5—C4120.51 (18)C15—C14—H14120.0
C6—C5—H5119.7C14—C15—C16119.5 (2)
C4—C5—H5119.7C14—C15—H15120.2
C5—C6—C7120.56 (18)C16—C15—H15120.2
C5—C6—H6119.7C15—C16—C11120.7 (2)
C7—C6—H6119.7C15—C16—H16119.7
C2—C7—C8118.35 (16)C11—C16—H16119.7
C2—C7—C6119.00 (16)C12—C17—H17A109.5
C8—C7—C6122.64 (17)C12—C17—H17B109.5
C9—C8—C7120.43 (17)H17A—C17—H17B109.5
C9—C8—H8119.8C12—C17—H17C109.5
C7—C8—H8119.8H17A—C17—H17C109.5
C8—C9—N1122.13 (16)H17B—C17—H17C109.5
C8—C9—C11122.85 (16)C4—C18—C2120.22 (18)
N1—C9—C11115.00 (15)C4—C18—H18119.9
O1—C10—N2124.36 (17)C2—C18—H18119.9
O1—C10—H10117.8C1—N1—C9118.43 (15)
N2—C10—H10117.8C10—N2—C1124.96 (15)
C12—C11—C16119.63 (17)C10—N2—H2117.5
C12—C11—C9121.41 (17)C1—N2—H2117.5
N1—C1—C2—C18178.11 (18)C9—C11—C12—C13176.52 (17)
N2—C1—C2—C18−1.4 (3)C16—C11—C12—C17179.84 (18)
N1—C1—C2—C7−1.8 (3)C9—C11—C12—C17−1.9 (3)
N2—C1—C2—C7178.68 (16)C11—C12—C13—C141.1 (3)
C18—C4—C5—C6−0.4 (3)C17—C12—C13—C14179.6 (2)
C4—C5—C6—C70.6 (3)C12—C13—C14—C150.6 (3)
C18—C2—C7—C8−179.13 (18)C13—C14—C15—C16−1.7 (3)
C1—C2—C7—C80.8 (3)C14—C15—C16—C111.0 (3)
C18—C2—C7—C60.1 (3)C12—C11—C16—C150.7 (3)
C1—C2—C7—C6−179.99 (17)C9—C11—C16—C15−177.58 (18)
C5—C6—C7—C2−0.4 (3)C5—C4—C18—C20.0 (3)
C5—C6—C7—C8178.7 (2)C7—C2—C18—C40.1 (3)
C2—C7—C8—C90.8 (3)C1—C2—C18—C4−179.81 (19)
C6—C7—C8—C9−178.41 (19)N2—C1—N1—C9−179.35 (16)
C7—C8—C9—N1−1.5 (3)C2—C1—N1—C91.1 (3)
C7—C8—C9—C11176.90 (18)C8—C9—N1—C10.6 (3)
C8—C9—C11—C1283.5 (3)C11—C9—N1—C1−177.95 (17)
N1—C9—C11—C12−98.0 (2)O1—C10—N2—C1−177.35 (19)
C8—C9—C11—C16−98.3 (2)N1—C1—N2—C10−1.6 (3)
N1—C9—C11—C1680.3 (2)C2—C1—N2—C10177.92 (17)
C16—C11—C12—C13−1.7 (3)
D—H···AD—HH···AD···AD—H···A
N2—H2···O1i0.862.102.940 (2)165
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2⋯O1i0.862.102.940 (2)165

Symmetry code: (i) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Molecular modeling of 3-arylisoquinoline antitumor agents active against A-549. A comparative molecular field analysis study.

Authors:  Won-Jea Cho; Eui-Ki Kim; Il Yeong Park; Eun Young Jeong; Tae Sung Kim; Thanh Nguyen Le; Dae-Duk Kim; Eung-Seok Lee
Journal:  Bioorg Med Chem       Date:  2002-09       Impact factor: 3.641

3.  Synthesis of new 3-arylisoquinolinamines: effect on topoisomerase I inhibition and cytotoxicity.

Authors:  Won-Jea Cho; Sun Young Min; Thanh Nguyen Le; Tae Sung Kim
Journal:  Bioorg Med Chem Lett       Date:  2003-12-15       Impact factor: 2.823

  3 in total

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