Literature DB >> 21583849

N-[(2S)-4-Chloro-2-(l-menthyloxy)-5-oxo-2,5-dihydro-3-furyl]-l-alanine.

Zhao-Yang Li1, Xiu-Mei Song, Zhao-Yang Wang, Kai Yang.   

Abstract

The title compound, C(17)H(26)ClNO(5), was prepared via a tandem asymmetric Michael addition-elimination reaction of (5S)-3,4-dichloro-5-(l-menth-yloxy)furan-2(5H)--one and l-alanine in the presence of potassium hydroxide. The five-membered furan-one ring is approximately planar while the six-membered menth-yloxy ring adopts a chair conformation. The crystal packing is stabilized by inter-molecular O-H⋯O and N-H⋯O hydrogen bonds.

Entities:  

Year:  2009        PMID: 21583849      PMCID: PMC2977713          DOI: 10.1107/S1600536809012720

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For chiral 5-(l-menth­yloxy)furan-2(5H)-­ones as key building blocks in the synthesis of supra­molecules and important natural products, see: Feringa & De Jong (1988 ▶); He et al. (2006 ▶); Lattmann et al. (1999 ▶). For the use of 4-aminofuran-2(5H)-one in chemical, pharmaceutical and agrochemical research, see: Kimura et al. (2000 ▶); Tanoury et al. (2008 ▶). For a related structure, see: Wang et al. (2008 ▶). For the synthesis of the chiral synthon (5S)-3,4-dichloro-5-(l-menth­yloxy)furan-2(5H)-one, see: Chen & Geng (1993 ▶).

Experimental

Crystal data

C17H26ClNO5 M = 359.84 Orthorhombic, a = 11.2481 (15) Å b = 19.642 (2) Å c = 9.0668 (11) Å V = 2003.1 (4) Å3 Z = 4 Mo Kα radiation μ = 0.21 mm−1 T = 293 K 0.30 × 0.23 × 0.18 mm

Data collection

Bruker APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2004 ▶) T min = 0.761, T max = 0.846 (expected range = 0.866–0.962) 10244 measured reflections 3534 independent reflections 2879 reflections with I > 2σ(I) R int = 0.037

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.120 S = 1.08 3534 reflections 222 parameters 312 restraints H-atom parameters constrained Δρmax = 0.33 e Å−3 Δρmin = −0.34 e Å−3 Absolute structure: Flack (1983 ▶), 1499 Friedel pairs Flack parameter: 0.00 (10) Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP in SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809012720/bq2134sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809012720/bq2134Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H26ClNO5F(000) = 768.0
Mr = 359.84Dx = 1.193 Mg m3
Orthorhombic, P21212Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2 2abCell parameters from 2460 reflections
a = 11.2481 (15) Åθ = 2.3–20.5°
b = 19.642 (2) ŵ = 0.21 mm1
c = 9.0668 (11) ÅT = 293 K
V = 2003.1 (4) Å3Block, colorless
Z = 40.30 × 0.23 × 0.18 mm
Bruker APEXII area-detector diffractometer3534 independent reflections
Radiation source: fine-focus sealed tube2879 reflections with I > 2σ(I)
graphiteRint = 0.037
ω scanθmax = 25.0°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker, 2004)h = −13→11
Tmin = 0.761, Tmax = 0.846k = −23→22
10244 measured reflectionsl = −10→7
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.046H-atom parameters constrained
wR(F2) = 0.120w = 1/[σ2(Fo2) + (0.0567P)2 + 0.3483P] where P = (Fo2 + 2Fc2)/3
S = 1.08(Δ/σ)max < 0.001
3534 reflectionsΔρmax = 0.33 e Å3
222 parametersΔρmin = −0.34 e Å3
312 restraintsAbsolute structure: Flack (1983), 1499 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.00 (10)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.4798 (4)0.78198 (19)0.8644 (4)0.0536 (9)
H10.55450.79920.82320.064*
C20.4754 (4)0.79762 (19)1.0295 (4)0.0619 (10)
H20.39960.77971.06610.074*
C30.5733 (5)0.7571 (2)1.1058 (6)0.0907 (13)
H3A0.64990.77421.07350.109*
H3B0.56770.76451.21140.109*
C40.5674 (6)0.6817 (2)1.0753 (6)0.0968 (14)
H4A0.63450.65941.12190.116*
H4B0.49530.66331.11850.116*
C50.5686 (6)0.6664 (2)0.9133 (6)0.0897 (13)
H50.64550.68070.87290.108*
C60.4707 (4)0.70649 (18)0.8358 (4)0.0651 (10)
H6A0.47560.69830.73050.078*
H6B0.39400.69030.86960.078*
C70.5537 (6)0.5895 (2)0.8864 (7)0.1183 (17)
H7A0.61220.56500.94230.177*
H7B0.56400.57990.78330.177*
H7C0.47560.57560.91670.177*
C80.4770 (5)0.8738 (2)1.0660 (5)0.0761 (12)
H80.41680.89551.00380.091*
C90.4415 (6)0.8870 (3)1.2264 (6)0.1027 (15)
H9A0.37490.85871.25170.154*
H9B0.42000.93401.23810.154*
H9C0.50720.87651.29000.154*
C100.5941 (6)0.9084 (3)1.0329 (7)0.1110 (16)
H10A0.65460.89041.09670.166*
H10B0.58640.95651.04910.166*
H10C0.61560.90010.93210.166*
C110.3749 (3)0.81985 (15)0.6456 (3)0.0374 (7)
H110.45340.82770.60180.045*
C120.2880 (3)0.87618 (15)0.6067 (3)0.0347 (7)
C130.1874 (3)0.84593 (15)0.5583 (4)0.0383 (7)
C140.2086 (3)0.77365 (15)0.5426 (4)0.0393 (7)
C150.2405 (3)0.99911 (15)0.6191 (4)0.0427 (8)
H150.18630.99200.53590.051*
C160.1683 (3)1.00945 (19)0.7577 (5)0.0611 (10)
H16A0.11880.97040.77410.092*
H16B0.11931.04920.74690.092*
H16C0.22081.01540.84020.092*
C170.3137 (3)1.06179 (15)0.5905 (4)0.0428 (8)
Cl10.04908 (8)0.87823 (4)0.51989 (12)0.0612 (3)
N10.3197 (2)0.94048 (12)0.6313 (3)0.0440 (7)
H1A0.39220.94810.65630.053*
O10.3799 (2)0.81852 (11)0.7981 (2)0.0423 (5)
O20.31972 (19)0.75881 (10)0.5881 (3)0.0426 (6)
O30.1433 (2)0.72965 (11)0.4945 (3)0.0532 (6)
O40.2496 (2)1.10975 (12)0.5305 (4)0.0780 (10)
H40.29191.14270.51220.117*
O50.4163 (2)1.06720 (11)0.6217 (3)0.0610 (7)
U11U22U33U12U13U23
C10.061 (2)0.0474 (17)0.0526 (19)0.0069 (16)−0.0111 (16)0.0100 (15)
C20.080 (2)0.0552 (19)0.051 (2)−0.0053 (18)−0.0131 (18)0.0075 (17)
C30.120 (3)0.078 (2)0.074 (2)0.009 (2)−0.036 (2)0.007 (2)
C40.135 (3)0.074 (3)0.081 (3)0.019 (3)−0.034 (3)0.021 (2)
C50.127 (3)0.065 (2)0.077 (3)0.031 (2)−0.025 (3)0.016 (2)
C60.094 (3)0.0458 (19)0.056 (2)0.0143 (19)−0.0131 (19)0.0062 (16)
C70.181 (4)0.075 (3)0.099 (3)0.046 (3)−0.034 (3)0.014 (3)
C80.102 (3)0.064 (2)0.062 (2)−0.001 (2)−0.015 (2)−0.005 (2)
C90.141 (4)0.094 (3)0.073 (3)−0.006 (3)−0.003 (3)−0.020 (3)
C100.137 (4)0.090 (3)0.107 (3)−0.031 (3)−0.005 (3)−0.008 (3)
C110.0426 (16)0.0299 (15)0.0397 (18)−0.0006 (14)−0.0029 (14)0.0015 (13)
C120.0369 (15)0.0272 (14)0.0401 (17)−0.0002 (13)0.0019 (13)0.0026 (13)
C130.0395 (16)0.0291 (14)0.0463 (19)0.0002 (13)−0.0049 (14)−0.0001 (14)
C140.0437 (18)0.0324 (16)0.0418 (19)−0.0012 (14)−0.0017 (14)−0.0025 (14)
C150.0397 (16)0.0267 (15)0.061 (2)0.0010 (13)−0.0075 (15)0.0044 (15)
C160.053 (2)0.048 (2)0.083 (3)−0.0019 (17)0.0107 (18)0.0009 (19)
C170.0399 (19)0.0279 (15)0.061 (2)0.0008 (14)−0.0058 (16)0.0032 (15)
Cl10.0444 (5)0.0433 (5)0.0960 (8)0.0070 (4)−0.0225 (5)−0.0125 (5)
N10.0358 (15)0.0283 (14)0.068 (2)−0.0006 (12)−0.0108 (14)0.0035 (13)
O10.0457 (13)0.0385 (12)0.0426 (14)0.0057 (10)−0.0046 (10)0.0046 (10)
O20.0428 (13)0.0264 (11)0.0585 (15)0.0032 (10)−0.0074 (10)−0.0051 (10)
O30.0541 (14)0.0321 (12)0.0734 (17)−0.0052 (11)−0.0091 (13)−0.0130 (12)
O40.0509 (15)0.0357 (14)0.147 (3)−0.0056 (12)−0.0219 (17)0.0330 (18)
O50.0410 (15)0.0330 (12)0.109 (2)−0.0023 (10)−0.0109 (14)0.0093 (14)
C1—O11.462 (4)C9—H9C0.9600
C1—C61.509 (5)C10—H10A0.9600
C1—C21.529 (6)C10—H10B0.9600
C1—H10.9800C10—H10C0.9600
C2—C31.524 (6)C11—O11.384 (4)
C2—C81.532 (6)C11—O21.447 (4)
C2—H20.9800C11—C121.518 (4)
C3—C41.509 (6)C11—H110.9800
C3—H3A0.9700C12—N11.331 (4)
C3—H3B0.9700C12—C131.351 (4)
C4—C51.499 (8)C13—C141.447 (4)
C4—H4A0.9700C13—Cl11.716 (3)
C4—H4B0.9700C14—O31.215 (4)
C5—C61.525 (6)C14—O21.348 (4)
C5—C71.540 (7)C15—N11.460 (4)
C5—H50.9800C15—C171.504 (4)
C6—H6A0.9700C15—C161.510 (5)
C6—H6B0.9700C15—H150.9800
C7—H7A0.9600C16—H16A0.9600
C7—H7B0.9600C16—H16B0.9600
C7—H7C0.9600C16—H16C0.9600
C8—C101.512 (7)C17—O51.193 (4)
C8—C91.530 (7)C17—O41.305 (4)
C8—H80.9800N1—H1A0.8600
C9—H9A0.9600O4—H40.8200
C9—H9B0.9600
O1—C1—C6111.1 (3)C8—C9—H9A109.5
O1—C1—C2106.2 (3)C8—C9—H9B109.5
C6—C1—C2111.3 (3)H9A—C9—H9B109.5
O1—C1—H1109.4C8—C9—H9C109.5
C6—C1—H1109.4H9A—C9—H9C109.5
C2—C1—H1109.4H9B—C9—H9C109.5
C3—C2—C1108.5 (4)C8—C10—H10A109.5
C3—C2—C8113.8 (4)C8—C10—H10B109.5
C1—C2—C8114.0 (3)H10A—C10—H10B109.5
C3—C2—H2106.7C8—C10—H10C109.5
C1—C2—H2106.7H10A—C10—H10C109.5
C8—C2—H2106.7H10B—C10—H10C109.5
C4—C3—C2113.4 (4)O1—C11—O2111.2 (2)
C4—C3—H3A108.9O1—C11—C12105.8 (2)
C2—C3—H3A108.9O2—C11—C12104.1 (2)
C4—C3—H3B108.9O1—C11—H11111.8
C2—C3—H3B108.9O2—C11—H11111.8
H3A—C3—H3B107.7C12—C11—H11111.8
C5—C4—C3112.1 (4)N1—C12—C13134.1 (3)
C5—C4—H4A109.2N1—C12—C11118.7 (3)
C3—C4—H4A109.2C13—C12—C11107.1 (3)
C5—C4—H4B109.2C12—C13—C14109.0 (3)
C3—C4—H4B109.2C12—C13—Cl1131.5 (2)
H4A—C4—H4B107.9C14—C13—Cl1119.5 (2)
C4—C5—C6109.9 (4)O3—C14—O2121.1 (3)
C4—C5—C7110.5 (4)O3—C14—C13129.3 (3)
C6—C5—C7110.8 (5)O2—C14—C13109.6 (3)
C4—C5—H5108.5N1—C15—C17109.0 (2)
C6—C5—H5108.5N1—C15—C16111.8 (3)
C7—C5—H5108.5C17—C15—C16109.1 (3)
C1—C6—C5112.3 (4)N1—C15—H15109.0
C1—C6—H6A109.1C17—C15—H15109.0
C5—C6—H6A109.1C16—C15—H15109.0
C1—C6—H6B109.1C15—C16—H16A109.5
C5—C6—H6B109.1C15—C16—H16B109.5
H6A—C6—H6B107.9H16A—C16—H16B109.5
C5—C7—H7A109.5C15—C16—H16C109.5
C5—C7—H7B109.5H16A—C16—H16C109.5
H7A—C7—H7B109.5H16B—C16—H16C109.5
C5—C7—H7C109.5O5—C17—O4124.7 (3)
H7A—C7—H7C109.5O5—C17—C15124.2 (3)
H7B—C7—H7C109.5O4—C17—C15111.1 (3)
C10—C8—C9109.9 (4)C12—N1—C15124.9 (3)
C10—C8—C2114.0 (4)C12—N1—H1A117.5
C9—C8—C2111.6 (4)C15—N1—H1A117.5
C10—C8—H8107.0C11—O1—C1116.8 (3)
C9—C8—H8107.0C14—O2—C11109.2 (2)
C2—C8—H8107.0C17—O4—H4109.5
O1—C1—C2—C3176.5 (3)N1—C12—C13—Cl1−5.9 (6)
C6—C1—C2—C355.4 (5)C11—C12—C13—Cl1170.3 (3)
O1—C1—C2—C8−55.6 (5)C12—C13—C14—O3−175.4 (3)
C6—C1—C2—C8−176.7 (4)Cl1—C13—C14—O35.8 (5)
C1—C2—C3—C4−54.8 (6)C12—C13—C14—O23.1 (4)
C8—C2—C3—C4177.1 (4)Cl1—C13—C14—O2−175.7 (2)
C2—C3—C4—C555.4 (7)N1—C15—C17—O5−23.0 (5)
C3—C4—C5—C6−53.4 (7)C16—C15—C17—O599.4 (4)
C3—C4—C5—C7−176.0 (5)N1—C15—C17—O4158.5 (3)
O1—C1—C6—C5−175.7 (4)C16—C15—C17—O4−79.2 (4)
C2—C1—C6—C5−57.5 (5)C13—C12—N1—C154.8 (6)
C4—C5—C6—C155.4 (6)C11—C12—N1—C15−171.0 (3)
C7—C5—C6—C1177.8 (5)C17—C15—N1—C12−156.0 (3)
C3—C2—C8—C1056.0 (6)C16—C15—N1—C1283.2 (4)
C1—C2—C8—C10−69.1 (5)O2—C11—O1—C183.7 (3)
C3—C2—C8—C9−69.2 (6)C12—C11—O1—C1−163.9 (3)
C1—C2—C8—C9165.7 (4)C6—C1—O1—C11−67.5 (4)
O1—C11—C12—N169.8 (3)C2—C1—O1—C11171.3 (3)
O2—C11—C12—N1−172.9 (3)O3—C14—O2—C11−177.5 (3)
O1—C11—C12—C13−107.0 (3)C13—C14—O2—C113.8 (3)
O2—C11—C12—C1310.2 (3)O1—C11—O2—C14105.0 (3)
N1—C12—C13—C14175.6 (3)C12—C11—O2—C14−8.4 (3)
C11—C12—C13—C14−8.2 (4)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O5i0.862.202.975 (4)150
O4—H4···O3ii0.821.862.655 (3)164
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O5i0.862.202.975 (4)150
O4—H4⋯O3ii0.821.862.655 (3)164

Symmetry codes: (i) ; (ii) .

  5 in total

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Authors:  Y Kimura; T Mizuno; T Kawano; K Okada; A Shimada
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2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Synthesis of combinatorial libraries of 3,4,5-trisubstituted 2(5H)-furanones. Part Two: Construction of a library of 4-amino-5-alkoxy-2(5H)-furanones.

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Journal:  Drug Des Discov       Date:  1999-11

4.  3,3'-Dibromo-5,5'-bis-[(S)-l-menth-yloxy]-4,4'-(hexane-1,6-diyldiimino)difuran-2(5H)-one.

Authors:  Zhao-Yang Wang; Xiu-Mei Song; Yue-Peng Cai; Zheng-Zhou Mao
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-31

5.  Development of a novel Pd-catalyzed N-acyl vinylogous carbamate synthesis for the key intermediate of ICE inhibitor VX-765.

Authors:  Gerald J Tanoury; Minzhang Chen; Yong Dong; Raymond E Forslund; Derek Magdziak
Journal:  Org Lett       Date:  2007-12-15       Impact factor: 6.005

  5 in total
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Authors:  Xiu-Mei Song; Zhao-Yang Li; Zhao-Yang Wang; Jian-Hua Fu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-11

2.  Methyl 2-[(4-chloro-2-meth-oxy-5-oxo-2,5-dihydro-furan-3-yl)amino]-acetate.

Authors:  Yang-Qing Mo; Zhao-Yang Wang; Jian-Hua Fu; Hua-Cai Fang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-30
  2 in total

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