Literature DB >> 21583789

Poly[diaqua-(μ(3)-pyridine-3,5-dicarboxyl-ato-κN:O:O)copper(II)].

Lin Du1, Li-Nan Li, Qi-Hua Zhao.   

Abstract

The title complex, [Cu(C(7)H(3)NO(4))(H(2)O)(2)](n), was prepared under hydro-thermal reaction conditions. In the crystal structure, the Cu(II) cation is located on a twofold rotation axis and is coordinated by two carboxyl-ate O atoms and one N atom from three pyridine-3,5-dicarboxyl-ate (PDA) anions and two water mol-ecules with a distorted trigonal-bipyramidal geometry. The tridentate PDA anion is also located on the twofold rotation axis and bridges the Cu(II) cations to form a two-dimensional polymeric layer. O-H⋯O hydrogen bonding between layers links the two-dimensional layers into a three-dimensional supra-molecular framework.

Entities:  

Year:  2009        PMID: 21583789      PMCID: PMC2977603          DOI: 10.1107/S1600536809013889

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background, see: Chang et al. (2005 ▶); Hou et al. (2004 ▶). For related structures, see: Plater et al. (1998 ▶); Whitfield et al. (2001 ▶).

Experimental

Crystal data

[Cu(C7H3NO4)(H2O)2] M = 264.68 Monoclinic, a = 10.1285 (16) Å b = 12.0669 (19) Å c = 7.2770 (11) Å β = 101.584 (2)° V = 871.3 (2) Å3 Z = 4 Mo Kα radiation μ = 2.52 mm−1 T = 298 K 0.23 × 0.18 × 0.07 mm

Data collection

Bruker APEXII 1000 CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2004 ▶) T min = 0.588, T max = 0.840 2751 measured reflections 1003 independent reflections 892 reflections with I > 2σ(I) R int = 0.024

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.148 S = 1.00 1003 reflections 70 parameters H-atom parameters constrained Δρmax = 1.31 e Å−3 Δρmin = −0.48 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809013889/xu2500sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809013889/xu2500Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C7H3NO4)(H2O)2]F(000) = 532
Mr = 264.68Dx = 2.018 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 2266 reflections
a = 10.1285 (16) Åθ = 2.7–28.3°
b = 12.0669 (19) ŵ = 2.52 mm1
c = 7.2770 (11) ÅT = 298 K
β = 101.584 (2)°Block, green
V = 871.3 (2) Å30.23 × 0.18 × 0.07 mm
Z = 4
Bruker APEXII 1000 CCD area-detector diffractometer1003 independent reflections
Radiation source: fine-focus sealed tube892 reflections with I > 2σ(I)
graphiteRint = 0.024
φ and ω scansθmax = 28.3°, θmin = 2.7°
Absorption correction: multi-scan (SADABS; Sheldrick, 2004)h = −13→12
Tmin = 0.588, Tmax = 0.840k = −15→12
2751 measured reflectionsl = −9→9
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.148H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.108P)2 + 2.2514P] where P = (Fo2 + 2Fc2)/3
1003 reflections(Δ/σ)max < 0.001
70 parametersΔρmax = 1.31 e Å3
0 restraintsΔρmin = −0.48 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.50000.16047 (5)0.25000.0252 (3)
O1W0.4771 (4)0.1611 (2)−0.0245 (5)0.0387 (8)
H1WA0.52160.1161−0.07820.046*
H1WB0.42260.2065−0.08960.046*
O10.6503 (3)0.0232 (3)0.2667 (5)0.0387 (8)
O20.7647 (4)0.1761 (3)0.2777 (7)0.0573 (12)
C10.7562 (4)0.0748 (4)0.2691 (6)0.0289 (9)
C20.8837 (3)0.0104 (3)0.2610 (5)0.0214 (7)
C31.00000.0672 (4)0.25000.0227 (10)
H3A1.00000.14430.25000.027*
C40.8885 (3)−0.1037 (3)0.2620 (5)0.0227 (8)
H4A0.8109−0.14260.27130.027*
N11.0000−0.1614 (3)0.25000.0215 (9)
U11U22U33U12U13U23
Cu10.0257 (4)0.0176 (4)0.0328 (4)0.0000.0073 (3)0.000
O1W0.049 (2)0.0299 (18)0.0370 (17)0.0036 (12)0.0074 (15)−0.0021 (12)
O10.0211 (15)0.0452 (19)0.0507 (19)0.0075 (12)0.0097 (13)−0.0097 (15)
O20.040 (2)0.0264 (19)0.101 (4)0.0149 (14)0.005 (2)−0.0080 (18)
C10.0189 (19)0.029 (2)0.036 (2)0.0121 (15)−0.0006 (15)−0.0074 (16)
C20.0162 (16)0.0185 (17)0.0293 (17)0.0049 (12)0.0043 (14)−0.0009 (14)
C30.022 (3)0.013 (2)0.032 (3)0.0000.001 (2)0.000
C40.0135 (16)0.0187 (18)0.0352 (19)−0.0015 (12)0.0033 (14)−0.0009 (14)
N10.017 (2)0.013 (2)0.035 (2)0.0000.0062 (18)0.000
Cu1—O1Wi1.964 (4)C1—C21.518 (5)
Cu1—O1W1.964 (4)C2—C41.378 (5)
Cu1—N1ii2.149 (4)C2—C31.379 (4)
Cu1—O1i2.236 (3)C3—C2iii1.379 (4)
Cu1—O12.236 (3)C3—H3A0.9300
O1W—H1WA0.8500C4—N11.344 (4)
O1W—H1WB0.8500C4—H4A0.9300
O1—C11.238 (5)N1—C4iii1.344 (4)
O2—C11.226 (5)N1—Cu1iv2.149 (4)
O1Wi—Cu1—O1W179.54 (17)O2—C1—C2117.5 (4)
O1Wi—Cu1—N1ii89.77 (8)O1—C1—C2118.9 (4)
O1W—Cu1—N1ii89.77 (8)C4—C2—C3117.8 (3)
O1Wi—Cu1—O1i89.90 (13)C4—C2—C1122.8 (3)
O1W—Cu1—O1i90.44 (13)C3—C2—C1119.4 (4)
N1ii—Cu1—O1i137.80 (9)C2—C3—C2iii120.4 (5)
O1Wi—Cu1—O190.44 (13)C2—C3—H3A119.8
O1W—Cu1—O189.90 (13)C2iii—C3—H3A119.8
N1ii—Cu1—O1137.80 (9)N1—C4—C2123.2 (3)
O1i—Cu1—O184.40 (18)N1—C4—H4A118.4
Cu1—O1W—H1WA120.0C2—C4—H4A118.4
Cu1—O1W—H1WB120.0C4iii—N1—C4117.6 (4)
H1WA—O1W—H1WB120.0C4iii—N1—Cu1iv121.2 (2)
C1—O1—Cu1101.9 (3)C4—N1—Cu1iv121.2 (2)
O2—C1—O1123.7 (4)
D—H···AD—HH···AD···AD—H···A
O1W—H1WA···O1v0.852.533.377 (5)178
O1W—H1WB···O2vi0.852.213.052 (5)171
Table 1

Selected geometric parameters (Å, °)

Cu1—O1W1.964 (4)
Cu1—N1i2.149 (4)
Cu1—O12.236 (3)

Symmetry codes: (i) ; (ii) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1WA⋯O1iii0.852.533.377 (5)178
O1W—H1WB⋯O2iv0.852.213.052 (5)171

Symmetry codes: (iii) ; (iv) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  {[Cu2(bpdado)2(H2O)2].H2O}n: a 1D nanotubular coordination polymer with wall made of edge-sharing hexagons, where bpdado = 2,2'-bipyridine-3,3'-dicarboxylate-1,1'-dioxide.

Authors:  Fei Chang; Zhe-Ming Wang; Hao-Ling Sun; Song Gao; Ge-Hui Wen; Xi-Xiang Zhang
Journal:  Dalton Trans       Date:  2005-08-05       Impact factor: 4.390

  2 in total
  1 in total

1.  Poly[diaqua-(μ(5)-pyridine-3,5-dicarboxyl-ato)strontium].

Authors:  Dan Li; Chaowen Duan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-05-31
  1 in total

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