| Literature DB >> 21583720 |
Yi-Chang Liu1, Chia-Her Lin, Bao-Tsan Ko.
Abstract
In the title mol-ecule, C(25)H(20)N(3)O(2)P, the dihedral angle between the meanEntities:
Year: 2009 PMID: 21583720 PMCID: PMC2977509 DOI: 10.1107/S1600536809029870
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C25H20N3O2P | |
| Orthorhombic, | Mo |
| Hall symbol: P 2c -2ac | Cell parameters from 6495 reflections |
| θ = 2.7–26.0° | |
| µ = 0.15 mm−1 | |
| Block, colourless | |
| 0.30 × 0.20 × 0.15 mm |
| Bruker SMART-1000 CCD diffractometer | 3684 independent reflections |
| Radiation source: fine-focus sealed tube | 3343 reflections with |
| graphite | |
| ω scans | θmax = 26.0°, θmin = 2.2° |
| Absorption correction: multi-scan ( | |
| 11920 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.001 | |
| 3684 reflections | Δρmax = 0.14 e Å−3 |
| 280 parameters | Δρmin = −0.20 e Å−3 |
| 1 restraint | Absolute structure: Flack (1983), 1412 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.01 (7) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| P | −0.78562 (3) | −0.27388 (4) | −0.41236 (3) | 0.04851 (13) | |
| O1 | −0.74629 (11) | −0.25123 (13) | −0.49386 (7) | 0.0523 (3) | |
| O2 | −0.89556 (10) | −0.23744 (14) | −0.39862 (10) | 0.0724 (4) | |
| N1 | −0.54417 (13) | −0.30745 (18) | −0.54995 (9) | 0.0573 (4) | |
| N2 | −0.58778 (12) | −0.21611 (16) | −0.59589 (8) | 0.0510 (3) | |
| N3 | −0.56809 (15) | −0.23649 (17) | −0.66558 (9) | 0.0617 (4) | |
| C1 | −0.73324 (14) | −0.11822 (19) | −0.52534 (11) | 0.0498 (4) | |
| C2 | −0.65289 (15) | −0.10047 (19) | −0.57421 (10) | 0.0536 (4) | |
| C3 | −0.63716 (18) | 0.0309 (2) | −0.60682 (12) | 0.0641 (5) | |
| H3B | −0.5823 | 0.0422 | −0.6391 | 0.077* | |
| C4 | −0.7020 (2) | 0.1451 (2) | −0.59187 (13) | 0.0675 (6) | |
| C5 | −0.78319 (19) | 0.1244 (2) | −0.54483 (14) | 0.0710 (6) | |
| H5A | −0.8283 | 0.1996 | −0.5351 | 0.085* | |
| C6 | −0.80000 (17) | −0.0052 (2) | −0.51143 (12) | 0.0652 (5) | |
| H6A | −0.8558 | −0.0163 | −0.4798 | 0.078* | |
| C7 | −0.49173 (14) | −0.3965 (2) | −0.59453 (10) | 0.0543 (4) | |
| C8 | −0.4308 (2) | −0.5185 (3) | −0.57796 (13) | 0.0768 (6) | |
| H8A | −0.4209 | −0.5492 | −0.5310 | 0.092* | |
| C9 | −0.3876 (2) | −0.5879 (3) | −0.63507 (16) | 0.0861 (7) | |
| H9A | −0.3471 | −0.6683 | −0.6265 | 0.103* | |
| C10 | −0.4020 (2) | −0.5427 (3) | −0.70636 (15) | 0.0862 (7) | |
| H10A | −0.3709 | −0.5943 | −0.7432 | 0.103* | |
| C11 | −0.45980 (19) | −0.4263 (3) | −0.72317 (13) | 0.0762 (6) | |
| H11A | −0.4683 | −0.3963 | −0.7704 | 0.091* | |
| C12 | −0.50631 (15) | −0.3531 (2) | −0.66534 (11) | 0.0561 (4) | |
| C13 | −0.6860 (3) | 0.2874 (3) | −0.6283 (2) | 0.0984 (9) | |
| H13A | −0.7377 | 0.3535 | −0.6114 | 0.148* | |
| H13B | −0.6929 | 0.2760 | −0.6793 | 0.148* | |
| H13C | −0.6173 | 0.3227 | −0.6173 | 0.148* | |
| C14 | −0.75764 (14) | −0.45832 (18) | −0.40115 (10) | 0.0511 (4) | |
| C15 | −0.66460 (14) | −0.5202 (2) | −0.42229 (12) | 0.0612 (5) | |
| H15A | −0.6144 | −0.4658 | −0.4459 | 0.073* | |
| C16 | −0.64533 (18) | −0.6626 (2) | −0.40869 (16) | 0.0746 (6) | |
| H16A | −0.5822 | −0.7036 | −0.4226 | 0.089* | |
| C17 | −0.7204 (3) | −0.7429 (2) | −0.37445 (17) | 0.0840 (8) | |
| H17A | −0.7086 | −0.8391 | −0.3663 | 0.101* | |
| C18 | −0.8118 (3) | −0.6822 (3) | −0.35251 (19) | 0.0982 (9) | |
| H18A | −0.8609 | −0.7367 | −0.3281 | 0.118* | |
| C19 | −0.83227 (19) | −0.5408 (3) | −0.36614 (16) | 0.0811 (7) | |
| H19A | −0.8956 | −0.5008 | −0.3520 | 0.097* | |
| C20 | −0.69692 (13) | −0.17140 (17) | −0.35845 (9) | 0.0460 (4) | |
| C21 | −0.73139 (19) | −0.1249 (2) | −0.29154 (12) | 0.0636 (6) | |
| H21A | −0.7985 | −0.1470 | −0.2757 | 0.076* | |
| C22 | −0.6643 (2) | −0.0451 (3) | −0.24858 (12) | 0.0791 (7) | |
| H22A | −0.6865 | −0.0153 | −0.2035 | 0.095* | |
| C23 | −0.5668 (2) | −0.0102 (2) | −0.27184 (15) | 0.0770 (6) | |
| H23A | −0.5234 | 0.0449 | −0.2430 | 0.092* | |
| C24 | −0.53189 (18) | −0.0559 (2) | −0.33777 (13) | 0.0677 (5) | |
| H24A | −0.4653 | −0.0310 | −0.3535 | 0.081* | |
| C25 | −0.59558 (14) | −0.1389 (2) | −0.38062 (11) | 0.0562 (4) | |
| H25A | −0.5708 | −0.1731 | −0.4243 | 0.067* |
| P | 0.0399 (2) | 0.0488 (2) | 0.0569 (3) | −0.00062 (15) | 0.0029 (2) | −0.0003 (2) |
| O1 | 0.0566 (7) | 0.0499 (6) | 0.0504 (7) | 0.0003 (5) | −0.0023 (6) | 0.0000 (5) |
| O2 | 0.0446 (7) | 0.0726 (9) | 0.0998 (14) | 0.0035 (6) | 0.0074 (7) | 0.0013 (8) |
| N1 | 0.0617 (9) | 0.0667 (10) | 0.0436 (8) | 0.0101 (8) | −0.0017 (7) | 0.0031 (7) |
| N2 | 0.0576 (9) | 0.0532 (8) | 0.0424 (8) | 0.0008 (6) | −0.0003 (6) | 0.0025 (6) |
| N3 | 0.0772 (11) | 0.0662 (10) | 0.0416 (9) | 0.0011 (8) | 0.0019 (8) | 0.0047 (7) |
| C1 | 0.0529 (10) | 0.0484 (10) | 0.0481 (10) | 0.0013 (7) | −0.0086 (8) | −0.0012 (8) |
| C2 | 0.0621 (10) | 0.0524 (10) | 0.0462 (10) | 0.0023 (8) | −0.0080 (8) | 0.0007 (8) |
| C3 | 0.0749 (13) | 0.0586 (12) | 0.0588 (12) | −0.0026 (9) | −0.0006 (9) | 0.0065 (9) |
| C4 | 0.0864 (14) | 0.0510 (11) | 0.0650 (14) | 0.0023 (9) | −0.0146 (11) | 0.0061 (10) |
| C5 | 0.0842 (14) | 0.0547 (11) | 0.0742 (15) | 0.0183 (10) | −0.0125 (12) | −0.0007 (10) |
| C6 | 0.0687 (12) | 0.0643 (12) | 0.0625 (13) | 0.0107 (9) | −0.0018 (10) | 0.0021 (10) |
| C7 | 0.0533 (10) | 0.0600 (10) | 0.0498 (10) | 0.0030 (8) | −0.0007 (8) | −0.0018 (8) |
| C8 | 0.0810 (13) | 0.0845 (15) | 0.0650 (13) | 0.0261 (12) | 0.0004 (12) | 0.0052 (12) |
| C9 | 0.0862 (16) | 0.0871 (16) | 0.0849 (18) | 0.0310 (13) | 0.0016 (14) | −0.0089 (14) |
| C10 | 0.0905 (17) | 0.0927 (17) | 0.0752 (17) | 0.0148 (14) | 0.0108 (13) | −0.0277 (14) |
| C11 | 0.0877 (16) | 0.0905 (17) | 0.0504 (12) | 0.0048 (13) | 0.0065 (11) | −0.0092 (11) |
| C12 | 0.0598 (10) | 0.0610 (11) | 0.0476 (10) | −0.0026 (8) | 0.0029 (8) | −0.0012 (8) |
| C13 | 0.124 (2) | 0.0571 (13) | 0.114 (2) | 0.0010 (14) | 0.0021 (19) | 0.0205 (14) |
| C14 | 0.0516 (8) | 0.0477 (8) | 0.0540 (11) | −0.0075 (7) | −0.0029 (8) | −0.0012 (8) |
| C15 | 0.0549 (10) | 0.0556 (10) | 0.0731 (14) | 0.0019 (7) | 0.0007 (9) | 0.0058 (10) |
| C16 | 0.0793 (13) | 0.0602 (11) | 0.0842 (15) | 0.0131 (10) | −0.0135 (13) | −0.0024 (12) |
| C17 | 0.110 (2) | 0.0502 (12) | 0.0916 (19) | −0.0074 (12) | −0.0226 (15) | 0.0083 (12) |
| C18 | 0.112 (2) | 0.0664 (14) | 0.116 (3) | −0.0274 (15) | 0.0132 (18) | 0.0180 (15) |
| C19 | 0.0705 (13) | 0.0671 (14) | 0.106 (2) | −0.0147 (10) | 0.0195 (13) | 0.0097 (13) |
| C20 | 0.0529 (9) | 0.0382 (8) | 0.0467 (9) | 0.0036 (7) | 0.0034 (7) | −0.0001 (7) |
| C21 | 0.0804 (16) | 0.0569 (12) | 0.0534 (13) | 0.0099 (10) | 0.0133 (10) | 0.0009 (9) |
| C22 | 0.122 (2) | 0.0656 (14) | 0.0500 (12) | 0.0125 (14) | −0.0011 (13) | −0.0161 (11) |
| C23 | 0.0982 (17) | 0.0576 (12) | 0.0752 (15) | −0.0024 (11) | −0.0260 (14) | −0.0107 (11) |
| C24 | 0.0624 (12) | 0.0676 (13) | 0.0733 (14) | −0.0109 (9) | −0.0138 (10) | −0.0027 (11) |
| C25 | 0.0527 (9) | 0.0622 (11) | 0.0536 (10) | −0.0032 (8) | 0.0018 (8) | −0.0064 (8) |
| P—O2 | 1.4675 (14) | C11—C12 | 1.410 (3) |
| P—O1 | 1.6138 (15) | C11—H11A | 0.9300 |
| P—C14 | 1.7835 (18) | C13—H13A | 0.9600 |
| P—C20 | 1.7948 (18) | C13—H13B | 0.9600 |
| O1—C1 | 1.392 (2) | C13—H13C | 0.9600 |
| N1—N2 | 1.335 (2) | C14—C15 | 1.380 (3) |
| N1—C7 | 1.357 (2) | C14—C19 | 1.391 (3) |
| N2—N3 | 1.337 (2) | C15—C16 | 1.385 (3) |
| N2—C2 | 1.427 (2) | C15—H15A | 0.9300 |
| N3—C12 | 1.351 (3) | C16—C17 | 1.377 (4) |
| C1—C2 | 1.382 (3) | C16—H16A | 0.9300 |
| C1—C6 | 1.387 (3) | C17—C18 | 1.362 (4) |
| C2—C3 | 1.392 (3) | C17—H17A | 0.9300 |
| C3—C4 | 1.385 (3) | C18—C19 | 1.379 (4) |
| C3—H3B | 0.9300 | C18—H18A | 0.9300 |
| C4—C5 | 1.371 (4) | C19—H19A | 0.9300 |
| C4—C13 | 1.515 (3) | C20—C25 | 1.392 (3) |
| C5—C6 | 1.385 (3) | C20—C21 | 1.393 (3) |
| C5—H5A | 0.9300 | C21—C22 | 1.392 (4) |
| C6—H6A | 0.9300 | C21—H21A | 0.9300 |
| C7—C12 | 1.394 (3) | C22—C23 | 1.359 (4) |
| C7—C8 | 1.420 (3) | C22—H22A | 0.9300 |
| C8—C9 | 1.365 (4) | C23—C24 | 1.376 (4) |
| C8—H8A | 0.9300 | C23—H23A | 0.9300 |
| C9—C10 | 1.407 (4) | C24—C25 | 1.381 (3) |
| C9—H9A | 0.9300 | C24—H24A | 0.9300 |
| C10—C11 | 1.357 (4) | C25—H25A | 0.9300 |
| C10—H10A | 0.9300 | ||
| O2—P—O1 | 115.53 (10) | N3—C12—C7 | 108.62 (16) |
| O2—P—C14 | 113.48 (8) | N3—C12—C11 | 129.8 (2) |
| O1—P—C14 | 100.15 (8) | C7—C12—C11 | 121.60 (19) |
| O2—P—C20 | 112.37 (9) | C4—C13—H13A | 109.5 |
| O1—P—C20 | 105.04 (8) | C4—C13—H13B | 109.5 |
| C14—P—C20 | 109.30 (8) | H13A—C13—H13B | 109.5 |
| C1—O1—P | 123.55 (12) | C4—C13—H13C | 109.5 |
| N2—N1—C7 | 102.17 (15) | H13A—C13—H13C | 109.5 |
| N1—N2—N3 | 116.91 (16) | H13B—C13—H13C | 109.5 |
| N1—N2—C2 | 123.51 (16) | C15—C14—C19 | 119.22 (18) |
| N3—N2—C2 | 119.59 (15) | C15—C14—P | 123.30 (13) |
| N2—N3—C12 | 102.88 (15) | C19—C14—P | 117.40 (16) |
| C2—C1—C6 | 119.13 (19) | C14—C15—C16 | 120.55 (19) |
| C2—C1—O1 | 118.37 (16) | C14—C15—H15A | 119.7 |
| C6—C1—O1 | 122.45 (18) | C16—C15—H15A | 119.7 |
| C1—C2—C3 | 120.14 (18) | C17—C16—C15 | 119.5 (2) |
| C1—C2—N2 | 121.79 (16) | C17—C16—H16A | 120.3 |
| C3—C2—N2 | 117.97 (18) | C15—C16—H16A | 120.3 |
| C4—C3—C2 | 121.0 (2) | C18—C17—C16 | 120.3 (2) |
| C4—C3—H3B | 119.5 | C18—C17—H17A | 119.8 |
| C2—C3—H3B | 119.5 | C16—C17—H17A | 119.8 |
| C5—C4—C3 | 118.1 (2) | C17—C18—C19 | 120.8 (2) |
| C5—C4—C13 | 120.9 (2) | C17—C18—H18A | 119.6 |
| C3—C4—C13 | 121.0 (3) | C19—C18—H18A | 119.6 |
| C4—C5—C6 | 122.0 (2) | C18—C19—C14 | 119.6 (2) |
| C4—C5—H5A | 119.0 | C18—C19—H19A | 120.2 |
| C6—C5—H5A | 119.0 | C14—C19—H19A | 120.2 |
| C5—C6—C1 | 119.7 (2) | C25—C20—C21 | 119.38 (18) |
| C5—C6—H6A | 120.2 | C25—C20—P | 122.57 (13) |
| C1—C6—H6A | 120.2 | C21—C20—P | 118.05 (15) |
| N1—C7—C12 | 109.42 (16) | C22—C21—C20 | 119.3 (2) |
| N1—C7—C8 | 129.50 (19) | C22—C21—H21A | 120.3 |
| C12—C7—C8 | 121.07 (18) | C20—C21—H21A | 120.3 |
| C9—C8—C7 | 116.0 (2) | C23—C22—C21 | 120.7 (2) |
| C9—C8—H8A | 122.0 | C23—C22—H22A | 119.7 |
| C7—C8—H8A | 122.0 | C21—C22—H22A | 119.7 |
| C8—C9—C10 | 122.6 (2) | C22—C23—C24 | 120.4 (2) |
| C8—C9—H9A | 118.7 | C22—C23—H23A | 119.8 |
| C10—C9—H9A | 118.7 | C24—C23—H23A | 119.8 |
| C11—C10—C9 | 122.2 (2) | C23—C24—C25 | 120.1 (2) |
| C11—C10—H10A | 118.9 | C23—C24—H24A | 119.9 |
| C9—C10—H10A | 118.9 | C25—C24—H24A | 119.9 |
| C10—C11—C12 | 116.5 (2) | C24—C25—C20 | 119.98 (19) |
| C10—C11—H11A | 121.7 | C24—C25—H25A | 120.0 |
| C12—C11—H11A | 121.7 | C20—C25—H25A | 120.0 |
| O2—P—O1—C1 | 69.76 (16) | N1—C7—C12—N3 | 0.0 (2) |
| C14—P—O1—C1 | −167.96 (14) | C8—C7—C12—N3 | 179.2 (2) |
| C20—P—O1—C1 | −54.64 (15) | N1—C7—C12—C11 | 179.55 (19) |
| C7—N1—N2—N3 | −0.5 (2) | C8—C7—C12—C11 | −1.2 (3) |
| C7—N1—N2—C2 | 179.47 (16) | C10—C11—C12—N3 | −179.2 (2) |
| N1—N2—N3—C12 | 0.5 (2) | C10—C11—C12—C7 | 1.3 (3) |
| C2—N2—N3—C12 | −179.50 (16) | O2—P—C14—C15 | 169.14 (18) |
| P—O1—C1—C2 | 145.53 (15) | O1—P—C14—C15 | 45.41 (19) |
| P—O1—C1—C6 | −36.9 (2) | C20—P—C14—C15 | −64.59 (19) |
| C6—C1—C2—C3 | 2.4 (3) | O2—P—C14—C19 | −14.0 (2) |
| O1—C1—C2—C3 | −179.93 (17) | O1—P—C14—C19 | −137.76 (18) |
| C6—C1—C2—N2 | −174.01 (18) | C20—P—C14—C19 | 112.24 (19) |
| O1—C1—C2—N2 | 3.7 (3) | C19—C14—C15—C16 | −0.2 (3) |
| N1—N2—C2—C1 | −47.2 (3) | P—C14—C15—C16 | 176.57 (17) |
| N3—N2—C2—C1 | 132.8 (2) | C14—C15—C16—C17 | 0.7 (4) |
| N1—N2—C2—C3 | 136.33 (19) | C15—C16—C17—C18 | −1.6 (4) |
| N3—N2—C2—C3 | −43.7 (2) | C16—C17—C18—C19 | 2.1 (5) |
| C1—C2—C3—C4 | −0.9 (3) | C17—C18—C19—C14 | −1.6 (5) |
| N2—C2—C3—C4 | 175.64 (18) | C15—C14—C19—C18 | 0.6 (4) |
| C2—C3—C4—C5 | −1.0 (3) | P—C14—C19—C18 | −176.3 (2) |
| C2—C3—C4—C13 | −179.0 (2) | O2—P—C20—C25 | −151.46 (15) |
| C3—C4—C5—C6 | 1.4 (4) | O1—P—C20—C25 | −25.08 (17) |
| C13—C4—C5—C6 | 179.3 (3) | C14—P—C20—C25 | 81.63 (17) |
| C4—C5—C6—C1 | 0.1 (4) | O2—P—C20—C21 | 29.44 (18) |
| C2—C1—C6—C5 | −2.0 (3) | O1—P—C20—C21 | 155.82 (14) |
| O1—C1—C6—C5 | −179.60 (18) | C14—P—C20—C21 | −97.47 (16) |
| N2—N1—C7—C12 | 0.33 (19) | C25—C20—C21—C22 | 1.0 (3) |
| N2—N1—C7—C8 | −178.8 (2) | P—C20—C21—C22 | −179.91 (17) |
| N1—C7—C8—C9 | 179.6 (2) | C20—C21—C22—C23 | 1.2 (3) |
| C12—C7—C8—C9 | 0.6 (3) | C21—C22—C23—C24 | −1.4 (4) |
| C7—C8—C9—C10 | 0.0 (4) | C22—C23—C24—C25 | −0.6 (4) |
| C8—C9—C10—C11 | 0.2 (5) | C23—C24—C25—C20 | 2.7 (3) |
| C9—C10—C11—C12 | −0.8 (4) | C21—C20—C25—C24 | −2.9 (3) |
| N2—N3—C12—C7 | −0.3 (2) | P—C20—C25—C24 | 178.04 (16) |
| N2—N3—C12—C11 | −179.8 (2) |
Selected bond angles (°)
| O2—P—O1 | 115.53 (10) |
| O2—P—C14 | 113.48 (8) |
| O1—P—C14 | 100.15 (8) |
| O2—P—C20 | 112.37 (9) |
| O1—P—C20 | 105.04 (8) |
| C14—P—C20 | 109.30 (8) |