| Literature DB >> 21582989 |
Chen-Yen Tsai1, Chia-Her Lin, Bao-Tsan Ko.
Abstract
In the title complex, [Pd(C(13)H(10)N(3)O)(2)], the Pd(II) atom is tetra-coordinated by two N atoms and two O atoms from two bidentate 2-(2H-benzotriazol-2-yl)-4-methylphenolate ligands, forming a square-planar environment. The asymmetric unit contains one half mol-ecule in which the Pd atom lies on a centre of symmetry.Entities:
Year: 2009 PMID: 21582989 PMCID: PMC2969542 DOI: 10.1107/S1600536809016390
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Pd(C13H10N3O)2] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 3862 reflections |
| θ = 2.7–28.2° | |
| µ = 0.89 mm−1 | |
| β = 109.287 (3)° | Columnar, red |
| 0.20 × 0.10 × 0.08 mm | |
| Bruker APEXII CCD diffractometer | 2690 independent reflections |
| Radiation source: fine-focus sealed tube | 1959 reflections with |
| graphite | |
| φ and ω scans | θmax = 28.3°, θmin = 1.7° |
| Absorption correction: multi-scan ( | |
| 9857 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2690 reflections | (Δ/σ)max = 0.002 |
| 161 parameters | Δρmax = 0.42 e Å−3 |
| 0 restraints | Δρmin = −0.82 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
| Pd | 1.0000 | 0.0000 | 0.5000 | 0.02562 (9) | |
| O | 0.98900 (13) | 0.1401 (3) | 0.38204 (11) | 0.0359 (4) | |
| N1 | 0.84675 (14) | −0.1144 (3) | 0.44409 (13) | 0.0284 (4) | |
| N2 | 0.76972 (15) | −0.0006 (3) | 0.37741 (13) | 0.0270 (4) | |
| N3 | 0.66977 (16) | −0.0858 (3) | 0.35839 (14) | 0.0328 (5) | |
| C1 | 0.89890 (19) | 0.2481 (4) | 0.33261 (16) | 0.0309 (5) | |
| C2 | 0.79138 (18) | 0.1917 (4) | 0.32782 (15) | 0.0280 (5) | |
| C3 | 0.70175 (19) | 0.3162 (4) | 0.27150 (16) | 0.0324 (5) | |
| H3B | 0.6319 | 0.2736 | 0.2698 | 0.039* | |
| C4 | 0.7139 (2) | 0.4982 (4) | 0.21906 (17) | 0.0352 (5) | |
| C5 | 0.8191 (2) | 0.5568 (4) | 0.22219 (18) | 0.0406 (7) | |
| H5A | 0.8293 | 0.6805 | 0.1870 | 0.049* | |
| C6 | 0.9083 (2) | 0.4351 (4) | 0.27641 (18) | 0.0392 (6) | |
| H6A | 0.9773 | 0.4775 | 0.2760 | 0.047* | |
| C7 | 0.79189 (19) | −0.2925 (4) | 0.46805 (16) | 0.0301 (5) | |
| C8 | 0.8287 (2) | −0.4786 (4) | 0.52925 (18) | 0.0375 (6) | |
| H8A | 0.9021 | −0.4980 | 0.5630 | 0.045* | |
| C9 | 0.7499 (2) | −0.6305 (4) | 0.53637 (18) | 0.0429 (7) | |
| H9A | 0.7707 | −0.7559 | 0.5766 | 0.051* | |
| C10 | 0.6391 (2) | −0.6036 (5) | 0.48527 (19) | 0.0463 (7) | |
| H10A | 0.5890 | −0.7107 | 0.4933 | 0.056* | |
| C11 | 0.6026 (2) | −0.4273 (4) | 0.4248 (2) | 0.0408 (6) | |
| H11A | 0.5291 | −0.4116 | 0.3908 | 0.049* | |
| C12 | 0.68220 (19) | −0.2680 (4) | 0.41576 (17) | 0.0328 (5) | |
| C13 | 0.6164 (2) | 0.6324 (5) | 0.15814 (19) | 0.0511 (7) | |
| H13A | 0.5514 | 0.5803 | 0.1690 | 0.077* | |
| H13B | 0.6094 | 0.6049 | 0.0958 | 0.077* | |
| H13C | 0.6266 | 0.7971 | 0.1711 | 0.077* |
| Pd | 0.01933 (15) | 0.02899 (11) | 0.02833 (15) | 0.00099 (10) | 0.00758 (11) | 0.00236 (11) |
| O | 0.0225 (9) | 0.0518 (10) | 0.0342 (10) | 0.0034 (7) | 0.0102 (8) | 0.0126 (8) |
| N1 | 0.0228 (11) | 0.0311 (9) | 0.0307 (11) | 0.0003 (8) | 0.0080 (9) | 0.0017 (8) |
| N2 | 0.0196 (10) | 0.0309 (8) | 0.0289 (11) | −0.0003 (8) | 0.0057 (9) | −0.0005 (9) |
| N3 | 0.0215 (12) | 0.0359 (9) | 0.0387 (12) | −0.0033 (8) | 0.0070 (10) | −0.0023 (9) |
| C1 | 0.0281 (14) | 0.0388 (11) | 0.0259 (13) | −0.0002 (10) | 0.0089 (11) | −0.0002 (10) |
| C2 | 0.0285 (14) | 0.0302 (10) | 0.0255 (13) | −0.0014 (9) | 0.0090 (11) | −0.0011 (9) |
| C3 | 0.0254 (14) | 0.0373 (11) | 0.0332 (14) | 0.0034 (9) | 0.0079 (12) | −0.0021 (10) |
| C4 | 0.0361 (15) | 0.0391 (11) | 0.0264 (13) | 0.0074 (11) | 0.0049 (11) | 0.0006 (11) |
| C5 | 0.0445 (18) | 0.0419 (14) | 0.0335 (15) | −0.0010 (10) | 0.0107 (14) | 0.0095 (10) |
| C6 | 0.0302 (15) | 0.0493 (13) | 0.0368 (16) | −0.0050 (10) | 0.0093 (13) | 0.0086 (11) |
| C7 | 0.0287 (14) | 0.0312 (10) | 0.0320 (14) | −0.0044 (9) | 0.0124 (12) | −0.0045 (9) |
| C8 | 0.0385 (16) | 0.0358 (12) | 0.0359 (15) | −0.0038 (10) | 0.0093 (13) | 0.0021 (11) |
| C9 | 0.057 (2) | 0.0341 (12) | 0.0400 (16) | −0.0080 (11) | 0.0194 (15) | 0.0011 (11) |
| C10 | 0.053 (2) | 0.0425 (13) | 0.0505 (19) | −0.0198 (13) | 0.0266 (16) | −0.0053 (13) |
| C11 | 0.0329 (16) | 0.0444 (12) | 0.0467 (18) | −0.0132 (11) | 0.0154 (14) | −0.0069 (12) |
| C12 | 0.0284 (14) | 0.0349 (11) | 0.0365 (14) | −0.0046 (9) | 0.0124 (12) | −0.0067 (10) |
| C13 | 0.0457 (18) | 0.0549 (16) | 0.0448 (18) | 0.0142 (13) | 0.0041 (15) | 0.0105 (13) |
| Pd—Oi | 1.9676 (15) | C5—C6 | 1.375 (4) |
| Pd—O | 1.9677 (15) | C5—H5A | 0.9300 |
| Pd—N1 | 1.9986 (18) | C6—H6A | 0.9300 |
| Pd—N1i | 1.9986 (18) | C7—C12 | 1.394 (3) |
| O—C1 | 1.321 (3) | C7—C8 | 1.401 (3) |
| N1—N2 | 1.347 (3) | C8—C9 | 1.372 (3) |
| N1—C7 | 1.361 (3) | C8—H8A | 0.9300 |
| N2—N3 | 1.324 (3) | C9—C10 | 1.403 (4) |
| N2—C2 | 1.422 (3) | C9—H9A | 0.9300 |
| N3—C12 | 1.346 (3) | C10—C11 | 1.353 (4) |
| C1—C2 | 1.410 (3) | C10—H10A | 0.9300 |
| C1—C6 | 1.410 (3) | C11—C12 | 1.417 (3) |
| C2—C3 | 1.398 (3) | C11—H11A | 0.9300 |
| C3—C4 | 1.362 (3) | C13—H13A | 0.9600 |
| C3—H3B | 0.9300 | C13—H13B | 0.9600 |
| C4—C5 | 1.391 (4) | C13—H13C | 0.9600 |
| C4—C13 | 1.515 (3) | ||
| Oi—Pd—O | 180.0 | C4—C5—H5A | 119.4 |
| Oi—Pd—N1 | 91.74 (7) | C5—C6—C1 | 122.4 (2) |
| O—Pd—N1 | 88.26 (7) | C5—C6—H6A | 118.8 |
| Oi—Pd—N1i | 88.27 (7) | C1—C6—H6A | 118.8 |
| O—Pd—N1i | 91.73 (7) | N1—C7—C12 | 106.86 (19) |
| N1—Pd—N1i | 180.0 | N1—C7—C8 | 131.3 (2) |
| C1—O—Pd | 120.80 (13) | C12—C7—C8 | 121.8 (2) |
| N2—N1—C7 | 104.42 (18) | C9—C8—C7 | 115.9 (3) |
| N2—N1—Pd | 123.90 (14) | C9—C8—H8A | 122.0 |
| C7—N1—Pd | 131.19 (16) | C7—C8—H8A | 122.0 |
| N3—N2—N1 | 114.76 (18) | C8—C9—C10 | 122.4 (2) |
| N3—N2—C2 | 121.06 (19) | C8—C9—H9A | 118.8 |
| N1—N2—C2 | 124.15 (18) | C10—C9—H9A | 118.8 |
| N2—N3—C12 | 103.9 (2) | C11—C10—C9 | 122.3 (2) |
| O—C1—C2 | 126.5 (2) | C11—C10—H10A | 118.8 |
| O—C1—C6 | 118.3 (2) | C9—C10—H10A | 118.8 |
| C2—C1—C6 | 115.3 (2) | C10—C11—C12 | 116.5 (3) |
| C3—C2—C1 | 121.4 (2) | C10—C11—H11A | 121.7 |
| C3—C2—N2 | 117.4 (2) | C12—C11—H11A | 121.7 |
| C1—C2—N2 | 121.1 (2) | N3—C12—C7 | 110.0 (2) |
| C4—C3—C2 | 121.8 (2) | N3—C12—C11 | 129.0 (2) |
| C4—C3—H3B | 119.1 | C7—C12—C11 | 121.0 (2) |
| C2—C3—H3B | 119.1 | C4—C13—H13A | 109.5 |
| C3—C4—C5 | 117.9 (2) | C4—C13—H13B | 109.5 |
| C3—C4—C13 | 121.6 (2) | H13A—C13—H13B | 109.5 |
| C5—C4—C13 | 120.5 (2) | C4—C13—H13C | 109.5 |
| C6—C5—C4 | 121.2 (2) | H13A—C13—H13C | 109.5 |
| C6—C5—H5A | 119.4 | H13B—C13—H13C | 109.5 |
| Pd—Oi | 1.9676 (15) |
| Pd—N1 | 1.9986 (18) |
| Oi—Pd—O | 180.0 |
| Oi—Pd—N1 | 91.74 (7) |
| O—Pd—N1 | 88.26 (7) |
| N1—Pd—N1i | 180.0 |
Symmetry code: (i) .