Literature DB >> 21582989

Bis[2-(2H-benzotriazol-2-yl)-4-methylphenolato]palladium(II).

Chen-Yen Tsai1, Chia-Her Lin, Bao-Tsan Ko.   

Abstract

In the title complex, [Pd(C(13)H(10)N(3)O)(2)], the Pd(II) atom is tetra-coordinated by two N atoms and two O atoms from two bidentate 2-(2H-benzotriazol-2-yl)-4-methylphenolate ligands, forming a square-planar environment. The asymmetric unit contains one half mol-ecule in which the Pd atom lies on a centre of symmetry.

Entities:  

Year:  2009        PMID: 21582989      PMCID: PMC2969542          DOI: 10.1107/S1600536809016390

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background information, see: Deming (1997 ▶); Kricheldorf (2006 ▶); Lin et al. (2008 ▶); Peng et al. (2008 ▶). For related structures: see: Yang et al. (1993 ▶).

Experimental

Crystal data

[Pd(C13H10N3O)2] M = 554.88 Monoclinic, a = 12.9768 (7) Å b = 5.6990 (3) Å c = 15.6035 (8) Å β = 109.287 (3)° V = 1089.19 (10) Å3 Z = 2 Mo Kα radiation μ = 0.89 mm−1 T = 295 K 0.20 × 0.10 × 0.08 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.842, T max = 0.932 9857 measured reflections 2690 independent reflections 1959 reflections with I > 2σ(I) R int = 0.104

Refinement

R[F 2 > 2σ(F 2)] = 0.031 wR(F 2) = 0.066 S = 1.03 2690 reflections 161 parameters H-atom parameters constrained Δρmax = 0.42 e Å−3 Δρmin = −0.82 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809016390/rk2144sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809016390/rk2144Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Pd(C13H10N3O)2]F(000) = 560
Mr = 554.88Dx = 1.692 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3862 reflections
a = 12.9768 (7) Åθ = 2.7–28.2°
b = 5.6990 (3) ŵ = 0.89 mm1
c = 15.6035 (8) ÅT = 295 K
β = 109.287 (3)°Columnar, red
V = 1089.19 (10) Å30.20 × 0.10 × 0.08 mm
Z = 2
Bruker APEXII CCD diffractometer2690 independent reflections
Radiation source: fine-focus sealed tube1959 reflections with I > 2σ(I)
graphiteRint = 0.104
φ and ω scansθmax = 28.3°, θmin = 1.7°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −16→17
Tmin = 0.842, Tmax = 0.932k = −7→7
9857 measured reflectionsl = −20→20
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.031Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.066H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.019P)2] where P = (Fo2 + 2Fc2)/3
2690 reflections(Δ/σ)max = 0.002
161 parametersΔρmax = 0.42 e Å3
0 restraintsΔρmin = −0.82 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Pd1.00000.00000.50000.02562 (9)
O0.98900 (13)0.1401 (3)0.38204 (11)0.0359 (4)
N10.84675 (14)−0.1144 (3)0.44409 (13)0.0284 (4)
N20.76972 (15)−0.0006 (3)0.37741 (13)0.0270 (4)
N30.66977 (16)−0.0858 (3)0.35839 (14)0.0328 (5)
C10.89890 (19)0.2481 (4)0.33261 (16)0.0309 (5)
C20.79138 (18)0.1917 (4)0.32782 (15)0.0280 (5)
C30.70175 (19)0.3162 (4)0.27150 (16)0.0324 (5)
H3B0.63190.27360.26980.039*
C40.7139 (2)0.4982 (4)0.21906 (17)0.0352 (5)
C50.8191 (2)0.5568 (4)0.22219 (18)0.0406 (7)
H5A0.82930.68050.18700.049*
C60.9083 (2)0.4351 (4)0.27641 (18)0.0392 (6)
H6A0.97730.47750.27600.047*
C70.79189 (19)−0.2925 (4)0.46805 (16)0.0301 (5)
C80.8287 (2)−0.4786 (4)0.52925 (18)0.0375 (6)
H8A0.9021−0.49800.56300.045*
C90.7499 (2)−0.6305 (4)0.53637 (18)0.0429 (7)
H9A0.7707−0.75590.57660.051*
C100.6391 (2)−0.6036 (5)0.48527 (19)0.0463 (7)
H10A0.5890−0.71070.49330.056*
C110.6026 (2)−0.4273 (4)0.4248 (2)0.0408 (6)
H11A0.5291−0.41160.39080.049*
C120.68220 (19)−0.2680 (4)0.41576 (17)0.0328 (5)
C130.6164 (2)0.6324 (5)0.15814 (19)0.0511 (7)
H13A0.55140.58030.16900.077*
H13B0.60940.60490.09580.077*
H13C0.62660.79710.17110.077*
U11U22U33U12U13U23
Pd0.01933 (15)0.02899 (11)0.02833 (15)0.00099 (10)0.00758 (11)0.00236 (11)
O0.0225 (9)0.0518 (10)0.0342 (10)0.0034 (7)0.0102 (8)0.0126 (8)
N10.0228 (11)0.0311 (9)0.0307 (11)0.0003 (8)0.0080 (9)0.0017 (8)
N20.0196 (10)0.0309 (8)0.0289 (11)−0.0003 (8)0.0057 (9)−0.0005 (9)
N30.0215 (12)0.0359 (9)0.0387 (12)−0.0033 (8)0.0070 (10)−0.0023 (9)
C10.0281 (14)0.0388 (11)0.0259 (13)−0.0002 (10)0.0089 (11)−0.0002 (10)
C20.0285 (14)0.0302 (10)0.0255 (13)−0.0014 (9)0.0090 (11)−0.0011 (9)
C30.0254 (14)0.0373 (11)0.0332 (14)0.0034 (9)0.0079 (12)−0.0021 (10)
C40.0361 (15)0.0391 (11)0.0264 (13)0.0074 (11)0.0049 (11)0.0006 (11)
C50.0445 (18)0.0419 (14)0.0335 (15)−0.0010 (10)0.0107 (14)0.0095 (10)
C60.0302 (15)0.0493 (13)0.0368 (16)−0.0050 (10)0.0093 (13)0.0086 (11)
C70.0287 (14)0.0312 (10)0.0320 (14)−0.0044 (9)0.0124 (12)−0.0045 (9)
C80.0385 (16)0.0358 (12)0.0359 (15)−0.0038 (10)0.0093 (13)0.0021 (11)
C90.057 (2)0.0341 (12)0.0400 (16)−0.0080 (11)0.0194 (15)0.0011 (11)
C100.053 (2)0.0425 (13)0.0505 (19)−0.0198 (13)0.0266 (16)−0.0053 (13)
C110.0329 (16)0.0444 (12)0.0467 (18)−0.0132 (11)0.0154 (14)−0.0069 (12)
C120.0284 (14)0.0349 (11)0.0365 (14)−0.0046 (9)0.0124 (12)−0.0067 (10)
C130.0457 (18)0.0549 (16)0.0448 (18)0.0142 (13)0.0041 (15)0.0105 (13)
Pd—Oi1.9676 (15)C5—C61.375 (4)
Pd—O1.9677 (15)C5—H5A0.9300
Pd—N11.9986 (18)C6—H6A0.9300
Pd—N1i1.9986 (18)C7—C121.394 (3)
O—C11.321 (3)C7—C81.401 (3)
N1—N21.347 (3)C8—C91.372 (3)
N1—C71.361 (3)C8—H8A0.9300
N2—N31.324 (3)C9—C101.403 (4)
N2—C21.422 (3)C9—H9A0.9300
N3—C121.346 (3)C10—C111.353 (4)
C1—C21.410 (3)C10—H10A0.9300
C1—C61.410 (3)C11—C121.417 (3)
C2—C31.398 (3)C11—H11A0.9300
C3—C41.362 (3)C13—H13A0.9600
C3—H3B0.9300C13—H13B0.9600
C4—C51.391 (4)C13—H13C0.9600
C4—C131.515 (3)
Oi—Pd—O180.0C4—C5—H5A119.4
Oi—Pd—N191.74 (7)C5—C6—C1122.4 (2)
O—Pd—N188.26 (7)C5—C6—H6A118.8
Oi—Pd—N1i88.27 (7)C1—C6—H6A118.8
O—Pd—N1i91.73 (7)N1—C7—C12106.86 (19)
N1—Pd—N1i180.0N1—C7—C8131.3 (2)
C1—O—Pd120.80 (13)C12—C7—C8121.8 (2)
N2—N1—C7104.42 (18)C9—C8—C7115.9 (3)
N2—N1—Pd123.90 (14)C9—C8—H8A122.0
C7—N1—Pd131.19 (16)C7—C8—H8A122.0
N3—N2—N1114.76 (18)C8—C9—C10122.4 (2)
N3—N2—C2121.06 (19)C8—C9—H9A118.8
N1—N2—C2124.15 (18)C10—C9—H9A118.8
N2—N3—C12103.9 (2)C11—C10—C9122.3 (2)
O—C1—C2126.5 (2)C11—C10—H10A118.8
O—C1—C6118.3 (2)C9—C10—H10A118.8
C2—C1—C6115.3 (2)C10—C11—C12116.5 (3)
C3—C2—C1121.4 (2)C10—C11—H11A121.7
C3—C2—N2117.4 (2)C12—C11—H11A121.7
C1—C2—N2121.1 (2)N3—C12—C7110.0 (2)
C4—C3—C2121.8 (2)N3—C12—C11129.0 (2)
C4—C3—H3B119.1C7—C12—C11121.0 (2)
C2—C3—H3B119.1C4—C13—H13A109.5
C3—C4—C5117.9 (2)C4—C13—H13B109.5
C3—C4—C13121.6 (2)H13A—C13—H13B109.5
C5—C4—C13120.5 (2)C4—C13—H13C109.5
C6—C5—C4121.2 (2)H13A—C13—H13C109.5
C6—C5—H5A119.4H13B—C13—H13C109.5
Pd—Oi1.9676 (15)
Pd—N11.9986 (18)
Oi—Pd—O180.0
Oi—Pd—N191.74 (7)
O—Pd—N188.26 (7)
N1—Pd—N1i180.0

Symmetry code: (i) .

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1.  2-(2H-Benzotriazol-2-yl)-4-methyl-phenyl diphenyl-phosphinate.

Authors:  Yi-Chang Liu; Chia-Her Lin; Bao-Tsan Ko
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-31

2.  2-(2H-Benzotriazol-2-yl)-6-[(diethyl-amino)meth-yl]-4-methyl-phenol.

Authors:  Jia-Ying Li; Yi-Chang Liu; Chia-Her Lin; Bao-Tsan Ko
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-09-16

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Authors:  Meng-Ling Lin; Chen-Yen Tsai; Chen-Yu Li; Bor-Hunn Huang; Bao-Tsan Ko
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-07-24

4.  Bis[μ-2-(2H-benzotriazol-2-yl)-4-methyl-phenolato]bis-[dimethyl-aluminium(III)].

Authors:  Chen-Yu Li; Chia-Her Lin; Bao-Tsan Ko
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-05-23

5.  Bis{2-[(E)-(4-fluoro-benz-yl)imino-meth-yl]-6-meth-oxy-phenolato}palladium(II).

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