Literature DB >> 21583481

N,N'-Bis(3,4-dimethoxy-benzyl-idene)butane-1,4-diamine.

Aliakbar Dehno Khalaji, Karla Fejfarova, Michal Dusek.   

Abstract

The title Schiff base compound, C(22)H(28)N(2)O(4), was synthesized by the reaction of 3,4-dimethoxy-benzaldehyde and 1,4-diamino-butane in methanol. The mol-ecule is located on a center of inversion with one half-mol-ecule in the asymmetric unit. Both C=N double bonds are in a trans configuration. Inter-molecular C-H⋯O hydrogen bonds link the mol-ecules into a three-dimensional network.

Entities:  

Year:  2009        PMID: 21583481      PMCID: PMC2977286          DOI: 10.1107/S1600536809025069

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Khalaji & Ng (2008 ▶); Khalaji et al. (2007 ▶).

Experimental

Crystal data

C22H28N2O4 M = 384.5 Monoclinic, a = 14.5770 (4) Å b = 7.6201 (2) Å c = 9.4456 (3) Å β = 101.725 (2)° V = 1027.31 (5) Å3 Z = 2 Cu Kα radiation μ = 0.69 mm−1 T = 120 K 0.29 × 0.16 × 0.09 mm

Data collection

Oxford Diffraction Gemini diffractometer with Xcalibur goniometer, an Atlas detector and a Gemini ultra Cu source Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009 ▶) T min = 0.765, T max = 0.935 5312 measured reflections 1594 independent reflections 1293 reflections with I > 3σ(I) R int = 0.024 θmax = 62.3°

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.096 S = 1.67 1594 reflections 127 parameters H-atom parameters constrained Δρmax = 0.13 e Å−3 Δρmin = −0.14 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis RED (Oxford Diffraction, 2009 ▶); data reduction: CrysAlis RED; program(s) used to solve structure: SIR2002 (Burla et al., 2003 ▶); program(s) used to refine structure: JANA2006 (Petříček et al., 2006 ▶); molecular graphics: DIAMOND (Brandenburg & Putz, 2005 ▶); software used to prepare material for publication: JANA2006. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809025069/bt2985sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809025069/bt2985Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C22H28N2O4F(000) = 412
Mr = 384.5Dx = 1.243 Mg m3
Monoclinic, P21/cCu Kα radiation, λ = 1.54184 Å
Hall symbol: -P 2ybcCell parameters from 3320 reflections
a = 14.5770 (4) Åθ = 3.1–62.2°
b = 7.6201 (2) ŵ = 0.69 mm1
c = 9.4456 (3) ÅT = 120 K
β = 101.725 (2)°Prism, colorless
V = 1027.31 (5) Å30.28 × 0.16 × 0.09 mm
Z = 2
Oxford Diffraction Gemini diffractometer with Xcalibur goniometer, an Atlas detector and a Gemini ultra Cu source1594 independent reflections
Radiation source: X-ray tube1293 reflections with I > 3σ(I)
mirrorRint = 0.024
Detector resolution: 20.7567 pixels mm-1θmax = 62.3°, θmin = 6.2°
Rotation method data acquisition using ω scansh = −15→16
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009)k = −6→8
Tmin = 0.765, Tmax = 0.935l = −10→8
5312 measured reflections
Refinement on F256 constraints
R[F2 > 2σ(F2)] = 0.035H-atom parameters constrained
wR(F2) = 0.096Weighting scheme based on measured s.u.'s w = 1/[σ2(I) + 0.0016I2]
S = 1.67(Δ/σ)max = 0.010
1594 reflectionsΔρmax = 0.13 e Å3
127 parametersΔρmin = −0.14 e Å3
0 restraints
Refinement. The refinement was carried out against all reflections. The conventional R-factor is always based on F. The goodness of fit as well as the weighted R-factor are based on F and F2 for refinement carried out on F and F2, respectively. The threshold expression is used only for calculating R-factors etc. and it is not relevant to the choice of reflections for refinement.The program used for refinement, Jana2006, uses the weighting scheme based on the experimental expectations, see _refine_ls_weighting_details, that does not force S to be one. Therefore the values of S are usually larger than the ones from the SHELX program.
xyzUiso*/Ueq
O10.32039 (6)−0.14609 (12)0.79180 (10)0.0270 (3)
O20.44401 (6)0.09623 (12)0.85186 (10)0.0273 (3)
N10.09135 (9)0.06805 (17)0.32350 (12)0.0300 (4)
C10.22426 (10)0.16821 (19)0.50087 (14)0.0249 (4)
C20.23245 (10)0.01522 (19)0.58506 (14)0.0253 (5)
C30.30568 (10)−0.00345 (17)0.70163 (14)0.0230 (4)
C40.37318 (9)0.13126 (18)0.73672 (14)0.0238 (4)
C50.36408 (10)0.28352 (19)0.65593 (14)0.0267 (5)
C60.28914 (10)0.30120 (19)0.53867 (14)0.0268 (5)
C70.14929 (10)0.1882 (2)0.37154 (14)0.0271 (5)
C80.02298 (10)0.1056 (2)0.19086 (15)0.0328 (5)
C90.03674 (10)−0.01461 (19)0.06882 (14)0.0280 (5)
C100.25804 (11)−0.2911 (2)0.75602 (16)0.0335 (5)
C110.50866 (10)0.2352 (2)0.89969 (16)0.0334 (5)
H20.186873−0.0766840.561330.0303*
H50.408950.3765140.6802250.032*
H60.2825030.4076740.4831970.0322*
H70.1440820.2982050.3209670.0325*
H8a0.029280.2255470.1632060.0393*
H8b−0.0391960.09070.2082120.0393*
H9a0.0980650.0035650.0489770.0337*
H9b0.034701−0.134630.0989310.0337*
H10a0.278325−0.3861480.8216630.0402*
H10b0.195898−0.2562610.7633710.0402*
H10c0.257961−0.3285570.6589430.0402*
H11a0.553230.1978410.9835610.0401*
H11b0.5409450.2653070.824020.0401*
H11c0.4752580.3359020.9236280.0401*
U11U22U33U12U13U23
O10.0291 (6)0.0255 (5)0.0232 (5)−0.0036 (4)−0.0026 (4)0.0037 (4)
O20.0245 (5)0.0302 (6)0.0231 (5)−0.0033 (4)−0.0049 (4)0.0017 (4)
N10.0301 (7)0.0343 (7)0.0218 (6)0.0028 (6)−0.0036 (5)−0.0020 (5)
C10.0275 (8)0.0271 (8)0.0189 (7)0.0039 (6)0.0018 (6)−0.0010 (6)
C20.0246 (7)0.0285 (8)0.0213 (7)−0.0002 (6)0.0014 (6)−0.0043 (6)
C30.0264 (7)0.0236 (8)0.0182 (7)0.0025 (6)0.0024 (5)0.0000 (6)
C40.0230 (7)0.0293 (8)0.0176 (7)0.0017 (6)0.0009 (6)−0.0020 (6)
C50.0276 (8)0.0278 (8)0.0234 (7)−0.0032 (6)0.0021 (6)−0.0005 (6)
C60.0319 (8)0.0272 (8)0.0208 (7)0.0021 (6)0.0037 (6)0.0019 (6)
C70.0308 (8)0.0284 (8)0.0200 (7)0.0057 (7)0.0003 (6)−0.0008 (6)
C80.0307 (8)0.0365 (9)0.0262 (8)0.0043 (7)−0.0059 (6)−0.0004 (7)
C90.0252 (8)0.0302 (8)0.0258 (8)−0.0001 (6)−0.0019 (6)0.0027 (6)
C100.0362 (9)0.0277 (8)0.0326 (8)−0.0072 (7)−0.0022 (7)0.0042 (6)
C110.0283 (8)0.0373 (9)0.0299 (8)−0.0088 (7)−0.0052 (6)0.0016 (7)
O1—C31.3706 (16)C6—H60.96
O1—C101.4272 (18)C7—H70.96
O2—C41.3651 (14)C8—C91.517 (2)
O2—C111.4287 (17)C8—H8a0.96
N1—C71.2657 (19)C8—H8b0.96
N1—C81.4620 (17)C9—C9i1.5236 (17)
C1—C21.403 (2)C9—H9a0.96
C1—C61.383 (2)C9—H9b0.96
C1—C71.4722 (17)C10—H10a0.96
C2—C31.3763 (17)C10—H10b0.96
C2—H20.96C10—H10c0.96
C3—C41.4139 (19)C11—H11a0.96
C4—C51.380 (2)C11—H11b0.96
C5—C61.3951 (18)C11—H11c0.96
C5—H50.96
C3—O1—C10117.08 (10)N1—C8—C9111.13 (12)
C4—O2—C11116.78 (10)N1—C8—H8a109.4714
C7—N1—C8117.04 (12)N1—C8—H8b109.4713
C2—C1—C6119.20 (11)C9—C8—H8a109.4714
C2—C1—C7121.32 (13)C9—C8—H8b109.471
C6—C1—C7119.46 (13)H8a—C8—H8b107.7587
C1—C2—C3120.15 (13)C8—C9—C9i112.43 (12)
C1—C2—H2119.9235C8—C9—H9a109.4708
C3—C2—H2119.9231C8—C9—H9b109.4709
O1—C3—C2125.24 (12)C9i—C9—H9a109.4717
O1—C3—C4114.61 (11)C9i—C9—H9b109.4713
C2—C3—C4120.14 (12)H9a—C9—H9b106.344
O2—C4—C3114.99 (11)O1—C10—H10a109.4718
O2—C4—C5125.24 (12)O1—C10—H10b109.4712
C3—C4—C5119.77 (11)O1—C10—H10c109.4714
C4—C5—C6119.46 (13)H10a—C10—H10b109.471
C4—C5—H5120.2676H10a—C10—H10c109.4712
C6—C5—H5120.2684H10b—C10—H10c109.4707
C1—C6—C5121.22 (13)O2—C11—H11a109.4712
C1—C6—H6119.3878O2—C11—H11b109.4717
C5—C6—H6119.3886O2—C11—H11c109.4713
N1—C7—C1123.46 (13)H11a—C11—H11b109.4716
N1—C7—H7118.272H11a—C11—H11c109.4708
C1—C7—H7118.2721H11b—C11—H11c109.4708
D—H···AD—HH···AD···AD—H···A
C11—H11A···O1ii0.962.543.4945 (17)171
C11—H11B···O1iii0.962.583.4830 (17)158
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C11—H11A⋯O1i0.962.543.4945 (17)171
C11—H11B⋯O1ii0.962.583.4830 (17)158

Symmetry codes: (i) ; (ii) .

  1 in total

1.  N,N'-Bis[(E)-2-Benzyl-idenepropylidene]ethane-1,2-diamine.

Authors:  Aliakbar Dehno Khalaji; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-08-16
  1 in total
  1 in total

1.  N,N'-Bis(2,3-dimethoxy-benzyl-idene)propane-1,3-diamine.

Authors:  Karla Fejfarová; Aliakbar Dehno Khalaji; Michal Dušek
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-08-29
  1 in total

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