Literature DB >> 21583395

Bis{(E)-4-bromo-2-[(2-chloro-3-pyrid-yl)imino-meth-yl]phenolato-κN,O}copper(II).

Wen-Kui Dong1, Jun-Feng Tong, Li-Li An, Jian-Chao Wu, Jian Yao.   

Abstract

In the title complex, [Cu(C(12)H(7)BrClN(2)O)(2)], the Cu(II) center is tetra-coordinated by two phenolate O and two azomethine N atoms from two independent bidentate 4-bromo-2-[(2-chloro-3-pyrid-yl)imino-meth-yl]phenolate (L) ligands. In the crystal structure, the Cu(II) atom has a distorted square-planar coordination environment. The inter-planar dihedral angles between the benzene and pyridine rings in the individual ligands are 63.83 (4) and 54.43 (3)°, indicating the pyridine ring to have considerably weaker steric hindrance.

Entities:  

Year:  2009        PMID: 21583395      PMCID: PMC2977463          DOI: 10.1107/S1600536809027792

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the applications of phenoxy­imines, see: John et al. (2007 ▶). For the structures of salen-type bis­oxime complexes, see: Dong et al. (2009a ▶,b ▶). Due to their chelating ability and positive redox potential, many copper(II) complexes are biologically active, see: Karmaka et al. (2007 ▶). For the preparation of (E)-[4-bromo-2-((2-chloro­pyridin-3-ylimino)meth­yl)]phenol, see: Dong et al. (2009c ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

[Cu(C12H7BrClN2O)2] M = 684.65 Monoclinic, a = 20.406 (2) Å b = 11.6378 (15) Å c = 10.5787 (13) Å β = 90.212 (2)° V = 2512.2 (5) Å3 Z = 4 Mo Kα radiation μ = 4.29 mm−1 T = 298 K 0.43 × 0.12 × 0.05 mm

Data collection

Siemens SMART 1000 CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.260, T max = 0.814 11575 measured reflections 4426 independent reflections 2340 reflections with I > 2σ(I) R int = 0.060

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.050 S = 0.88 4426 reflections 316 parameters H-atom parameters constrained Δρmax = 0.37 e Å−3 Δρmin = −0.36 e Å−3 Data collection: SMART (Siemens, 1996 ▶); cell refinement: SAINT (Siemens, 1996 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809027792/hg2538sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809027792/hg2538Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C12H7BrClN2O)2]F(000) = 1340
Mr = 684.65Dx = 1.810 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2128 reflections
a = 20.406 (2) Åθ = 3.5–23.5°
b = 11.6378 (15) ŵ = 4.29 mm1
c = 10.5787 (13) ÅT = 298 K
β = 90.212 (2)°Needle-like, brown
V = 2512.2 (5) Å30.43 × 0.12 × 0.05 mm
Z = 4
Siemens SMART 1000 CCD area-detector diffractometer4426 independent reflections
Radiation source: fine-focus sealed tube2340 reflections with I > 2σ(I)
graphiteRint = 0.060
φ and ω scansθmax = 25.0°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −17→24
Tmin = 0.260, Tmax = 0.814k = −13→13
11575 measured reflectionsl = −11→12
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.050H-atom parameters constrained
S = 0.88w = 1/[σ2(Fo2) + (0.0002P)2] where P = (Fo2 + 2Fc2)/3
4426 reflections(Δ/σ)max < 0.001
316 parametersΔρmax = 0.37 e Å3
0 restraintsΔρmin = −0.35 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.25248 (3)0.22385 (4)0.41801 (5)0.04108 (16)
Br10.13387 (3)−0.36645 (4)0.54348 (6)0.0734 (2)
Br20.35180 (3)0.81346 (4)0.23403 (5)0.06505 (18)
Cl10.37963 (6)0.12525 (11)0.20905 (11)0.0646 (4)
Cl20.20549 (7)0.12485 (9)0.15999 (12)0.0644 (4)
N10.4802 (2)0.1582 (3)0.3542 (4)0.0521 (11)
N20.31148 (17)0.0920 (3)0.4578 (3)0.0363 (9)
N30.0797 (3)0.1474 (4)0.1537 (4)0.0752 (15)
N40.19682 (17)0.3327 (3)0.3208 (3)0.0358 (9)
O10.17657 (13)0.1421 (2)0.4686 (3)0.0435 (8)
O20.32382 (13)0.3273 (2)0.4265 (3)0.0437 (8)
C10.2900 (2)−0.0104 (3)0.4797 (3)0.0356 (11)
H10.3217−0.06660.49350.043*
C20.2227 (2)−0.0477 (3)0.4853 (4)0.0366 (12)
C30.1698 (2)0.0308 (4)0.4827 (4)0.0371 (12)
C40.1058 (2)−0.0135 (3)0.4983 (4)0.0480 (13)
H40.07020.03640.49820.058*
C50.0954 (2)−0.1300 (4)0.5138 (4)0.0551 (14)
H50.0530−0.15780.52300.066*
C60.1480 (2)−0.2060 (3)0.5158 (4)0.0486 (13)
C70.2108 (2)−0.1670 (3)0.5022 (4)0.0444 (13)
H70.2457−0.21850.50410.053*
C80.4174 (2)0.1324 (3)0.3550 (4)0.0378 (12)
C90.3807 (2)0.1104 (3)0.4641 (4)0.0354 (12)
C100.4137 (2)0.1121 (3)0.5773 (4)0.0438 (12)
H100.39160.09600.65200.053*
C110.4796 (2)0.1377 (4)0.5798 (5)0.0547 (14)
H110.50280.13890.65560.066*
C120.5103 (2)0.1615 (4)0.4666 (6)0.0524 (14)
H120.55450.18090.46880.063*
C130.2121 (2)0.4391 (4)0.3010 (4)0.0396 (12)
H130.18020.48510.26360.048*
C140.2736 (2)0.4933 (3)0.3312 (4)0.0353 (11)
C150.3267 (2)0.4341 (4)0.3864 (4)0.0348 (11)
C160.3869 (2)0.4935 (3)0.3971 (4)0.0442 (12)
H160.42260.45690.43460.053*
C170.3941 (2)0.6050 (4)0.3531 (4)0.0505 (14)
H170.43450.64160.35900.061*
C180.3414 (3)0.6615 (3)0.3007 (4)0.0443 (13)
C190.2818 (2)0.6099 (3)0.2905 (4)0.0434 (13)
H190.24640.65030.25720.052*
C200.1335 (2)0.1942 (4)0.2005 (5)0.0523 (14)
C210.1350 (2)0.2933 (4)0.2745 (4)0.0417 (12)
C220.0771 (3)0.3453 (4)0.3016 (5)0.0582 (15)
H220.07570.41030.35260.070*
C230.0194 (3)0.2987 (5)0.2509 (6)0.0788 (18)
H23−0.02090.33400.26440.095*
C240.0237 (3)0.2009 (6)0.1816 (6)0.093 (2)
H24−0.01510.16880.15140.112*
U11U22U33U12U13U23
Cu10.0426 (4)0.0358 (3)0.0447 (4)−0.0020 (3)−0.0014 (3)0.0047 (3)
Br10.0707 (4)0.0367 (3)0.1127 (5)−0.0049 (3)0.0121 (4)0.0083 (3)
Br20.0813 (5)0.0403 (3)0.0736 (4)−0.0137 (3)0.0085 (3)0.0061 (3)
Cl10.0733 (10)0.0825 (9)0.0381 (8)−0.0144 (8)0.0027 (7)0.0040 (7)
Cl20.0823 (11)0.0519 (7)0.0589 (9)−0.0004 (7)−0.0031 (7)−0.0107 (7)
N10.039 (3)0.066 (3)0.051 (3)−0.008 (2)0.009 (2)0.000 (2)
N20.041 (3)0.036 (2)0.033 (2)−0.0018 (19)0.0009 (19)0.0046 (18)
N30.072 (4)0.074 (3)0.080 (4)−0.023 (3)−0.024 (3)0.008 (3)
N40.041 (3)0.035 (2)0.032 (2)−0.0039 (19)−0.0021 (19)0.0037 (18)
O10.039 (2)0.0334 (16)0.058 (2)−0.0003 (15)0.0065 (15)0.0095 (16)
O20.042 (2)0.0348 (16)0.054 (2)−0.0035 (15)−0.0072 (15)0.0078 (16)
C10.043 (3)0.036 (3)0.028 (3)0.010 (2)−0.005 (2)0.001 (2)
C20.034 (3)0.036 (3)0.039 (3)−0.003 (2)0.002 (2)0.004 (2)
C30.042 (3)0.037 (3)0.033 (3)−0.002 (3)0.005 (2)0.001 (2)
C40.041 (4)0.038 (3)0.065 (4)0.001 (2)0.003 (3)0.006 (3)
C50.035 (3)0.048 (3)0.082 (4)−0.008 (3)0.001 (3)0.003 (3)
C60.053 (4)0.032 (3)0.061 (4)−0.005 (3)0.004 (3)0.003 (3)
C70.050 (4)0.035 (3)0.048 (3)0.006 (2)0.002 (3)0.001 (2)
C80.045 (3)0.036 (2)0.033 (3)0.006 (2)0.002 (3)0.004 (2)
C90.035 (3)0.034 (3)0.037 (3)0.001 (2)−0.001 (3)−0.005 (2)
C100.047 (4)0.052 (3)0.032 (3)0.001 (3)0.000 (3)0.008 (3)
C110.046 (4)0.062 (3)0.055 (4)0.005 (3)−0.012 (3)−0.003 (3)
C120.029 (3)0.051 (3)0.078 (4)0.002 (2)0.009 (3)−0.006 (3)
C130.042 (3)0.046 (3)0.031 (3)0.008 (3)0.001 (2)0.008 (2)
C140.038 (3)0.040 (3)0.027 (3)0.000 (3)0.005 (2)0.001 (2)
C150.032 (3)0.043 (3)0.029 (3)−0.006 (3)0.005 (2)−0.001 (2)
C160.048 (4)0.045 (3)0.040 (3)−0.006 (3)−0.002 (2)−0.003 (2)
C170.048 (4)0.051 (3)0.053 (4)−0.018 (3)0.010 (3)−0.015 (3)
C180.053 (4)0.032 (3)0.048 (3)−0.010 (3)0.007 (3)0.003 (2)
C190.054 (4)0.032 (3)0.044 (3)0.006 (2)0.006 (3)0.002 (2)
C200.054 (4)0.052 (3)0.051 (4)−0.017 (3)−0.012 (3)0.015 (3)
C210.042 (4)0.045 (3)0.038 (3)−0.010 (3)−0.007 (3)0.008 (3)
C220.043 (4)0.062 (3)0.070 (4)−0.001 (3)−0.004 (3)0.009 (3)
C230.048 (4)0.094 (5)0.094 (5)0.001 (4)−0.003 (4)0.033 (4)
C240.062 (5)0.106 (6)0.110 (6)−0.044 (5)−0.039 (4)0.026 (5)
Cu1—O21.891 (3)C6—C71.368 (5)
Cu1—O11.897 (2)C7—H70.9300
Cu1—N41.986 (3)C8—C91.402 (5)
Cu1—N21.994 (3)C9—C101.372 (5)
Br1—C61.912 (4)C10—C111.378 (5)
Br2—C181.916 (4)C10—H100.9300
Cl1—C81.726 (4)C11—C121.381 (5)
Cl2—C201.731 (5)C11—H110.9300
N1—C81.316 (5)C12—H120.9300
N1—C121.336 (6)C13—C141.439 (5)
N2—C11.291 (4)C13—H130.9300
N2—C91.429 (5)C14—C151.410 (5)
N3—C201.320 (5)C14—C191.434 (5)
N3—C241.335 (6)C15—C161.415 (5)
N4—C131.295 (4)C16—C171.387 (5)
N4—C211.427 (5)C16—H160.9300
O1—C31.311 (4)C17—C181.376 (6)
O2—C151.314 (4)C17—H170.9300
C1—C21.442 (5)C18—C191.361 (5)
C1—H10.9300C19—H190.9300
C2—C31.414 (5)C20—C211.395 (6)
C2—C71.421 (5)C21—C221.359 (5)
C3—C41.416 (5)C22—C231.400 (6)
C4—C51.382 (5)C22—H220.9300
C4—H40.9300C23—C241.358 (7)
C5—C61.390 (5)C23—H230.9300
C5—H50.9300C24—H240.9300
O2—Cu1—O1159.31 (12)C9—C10—H10120.2
O2—Cu1—N493.27 (13)C11—C10—H10120.2
O1—Cu1—N489.99 (13)C10—C11—C12118.2 (5)
O2—Cu1—N290.91 (13)C10—C11—H11120.9
O1—Cu1—N292.73 (13)C12—C11—H11120.9
N4—Cu1—N2160.68 (13)N1—C12—C11123.8 (5)
C8—N1—C12116.4 (4)N1—C12—H12118.1
C1—N2—C9117.8 (3)C11—C12—H12118.1
C1—N2—Cu1122.9 (3)N4—C13—C14126.4 (4)
C9—N2—Cu1119.3 (2)N4—C13—H13116.8
C20—N3—C24115.8 (5)C14—C13—H13116.8
C13—N4—C21117.7 (4)C15—C14—C19119.8 (4)
C13—N4—Cu1123.8 (3)C15—C14—C13123.1 (4)
C21—N4—Cu1118.4 (3)C19—C14—C13116.8 (4)
C3—O1—Cu1127.9 (3)O2—C15—C14124.1 (4)
C15—O2—Cu1128.5 (3)O2—C15—C16118.4 (4)
N2—C1—C2127.5 (4)C14—C15—C16117.4 (4)
N2—C1—H1116.2C17—C16—C15121.6 (4)
C2—C1—H1116.2C17—C16—H16119.2
C3—C2—C7120.2 (4)C15—C16—H16119.2
C3—C2—C1122.1 (4)C18—C17—C16119.9 (4)
C7—C2—C1117.5 (4)C18—C17—H17120.0
O1—C3—C2124.0 (4)C16—C17—H17120.0
O1—C3—C4118.1 (4)C19—C18—C17121.3 (4)
C2—C3—C4117.9 (4)C19—C18—Br2118.6 (4)
C5—C4—C3120.8 (4)C17—C18—Br2120.1 (4)
C5—C4—H4119.6C18—C19—C14119.9 (4)
C3—C4—H4119.6C18—C19—H19120.0
C4—C5—C6120.5 (4)C14—C19—H19120.0
C4—C5—H5119.7N3—C20—C21124.6 (5)
C6—C5—H5119.7N3—C20—Cl2114.8 (5)
C7—C6—C5120.7 (4)C21—C20—Cl2120.5 (4)
C7—C6—Br1118.8 (3)C22—C21—C20118.0 (4)
C5—C6—Br1120.4 (4)C22—C21—N4123.6 (4)
C6—C7—C2119.8 (4)C20—C21—N4118.4 (4)
C6—C7—H7120.1C21—C22—C23118.5 (5)
C2—C7—H7120.1C21—C22—H22120.7
N1—C8—C9124.8 (4)C23—C22—H22120.7
N1—C8—Cl1115.9 (3)C24—C23—C22118.4 (6)
C9—C8—Cl1119.3 (4)C24—C23—H23120.8
C10—C9—C8117.0 (4)C22—C23—H23120.8
C10—C9—N2121.6 (4)N3—C24—C23124.6 (6)
C8—C9—N2121.4 (4)N3—C24—H24117.7
C9—C10—C11119.7 (4)C23—C24—H24117.7
O2—Cu1—N2—C1172.5 (3)C1—N2—C9—C10−72.8 (5)
O1—Cu1—N2—C112.8 (3)Cu1—N2—C9—C10106.5 (4)
N4—Cu1—N2—C1−84.9 (5)C1—N2—C9—C8109.8 (4)
O2—Cu1—N2—C9−6.8 (3)Cu1—N2—C9—C8−70.8 (4)
O1—Cu1—N2—C9−166.4 (3)C8—C9—C10—C111.7 (6)
N4—Cu1—N2—C995.8 (5)N2—C9—C10—C11−175.7 (4)
O2—Cu1—N4—C13−9.1 (3)C9—C10—C11—C120.2 (6)
O1—Cu1—N4—C13150.5 (3)C8—N1—C12—C111.1 (7)
N2—Cu1—N4—C13−111.3 (5)C10—C11—C12—N1−1.8 (7)
O2—Cu1—N4—C21173.9 (3)C21—N4—C13—C14−175.0 (4)
O1—Cu1—N4—C21−26.6 (3)Cu1—N4—C13—C147.9 (6)
N2—Cu1—N4—C2171.7 (5)N4—C13—C14—C150.9 (7)
O2—Cu1—O1—C3−117.9 (4)N4—C13—C14—C19174.6 (4)
N4—Cu1—O1—C3142.8 (4)Cu1—O2—C15—C142.2 (6)
N2—Cu1—O1—C3−18.0 (4)Cu1—O2—C15—C16−176.8 (3)
O1—Cu1—O2—C15−94.3 (5)C19—C14—C15—O2180.0 (3)
N4—Cu1—O2—C154.4 (3)C13—C14—C15—O2−6.6 (6)
N2—Cu1—O2—C15165.5 (3)C19—C14—C15—C16−1.0 (6)
C9—N2—C1—C2176.4 (4)C13—C14—C15—C16172.4 (4)
Cu1—N2—C1—C2−2.9 (6)O2—C15—C16—C17177.9 (4)
N2—C1—C2—C3−8.4 (7)C14—C15—C16—C17−1.2 (6)
N2—C1—C2—C7175.7 (4)C15—C16—C17—C181.8 (6)
Cu1—O1—C3—C212.6 (6)C16—C17—C18—C19−0.2 (7)
Cu1—O1—C3—C4−168.5 (3)C16—C17—C18—Br2−177.7 (3)
C7—C2—C3—O1179.4 (4)C17—C18—C19—C14−2.0 (7)
C1—C2—C3—O13.6 (7)Br2—C18—C19—C14175.5 (3)
C7—C2—C3—C40.5 (6)C15—C14—C19—C182.6 (6)
C1—C2—C3—C4−175.3 (4)C13—C14—C19—C18−171.3 (4)
O1—C3—C4—C5−179.9 (4)C24—N3—C20—C21−0.3 (7)
C2—C3—C4—C5−0.9 (6)C24—N3—C20—Cl2−178.6 (4)
C3—C4—C5—C60.8 (7)N3—C20—C21—C220.6 (7)
C4—C5—C6—C7−0.2 (7)Cl2—C20—C21—C22178.8 (3)
C4—C5—C6—Br1177.7 (3)N3—C20—C21—N4178.7 (4)
C5—C6—C7—C2−0.3 (7)Cl2—C20—C21—N4−3.0 (5)
Br1—C6—C7—C2−178.1 (3)C13—N4—C21—C22−53.4 (6)
C3—C2—C7—C60.1 (7)Cu1—N4—C21—C22123.8 (4)
C1—C2—C7—C6176.1 (4)C13—N4—C21—C20128.5 (4)
C12—N1—C8—C91.1 (6)Cu1—N4—C21—C20−54.3 (5)
C12—N1—C8—Cl1−178.6 (3)C20—C21—C22—C23−1.8 (7)
N1—C8—C9—C10−2.5 (6)N4—C21—C22—C23−179.9 (4)
Cl1—C8—C9—C10177.1 (3)C21—C22—C23—C242.8 (8)
N1—C8—C9—N2174.9 (4)C20—N3—C24—C231.4 (9)
Cl1—C8—C9—N2−5.4 (5)C22—C23—C24—N3−2.7 (9)
  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  {2,2'-[1,1'-(Ethyl-enedioxy-dinitrilo)diethyl-idyne]di-1-naphtholato}nickel(II).

Authors:  Wen-Kui Dong; Jian-Chao Wu; Jian Yao; Shang-Sheng Gong; Jun-Feng Tong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-20

3.  {2,2'-[1,1'-(Ethyl-enedioxy-dinitrilo)diethyl-idyne]di-1-naphtholato}copper(II).

Authors:  Wen-Kui Dong; Jian-Chao Wu; Jian Yao; Shang-Sheng Gong; Jun-Feng Tong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-20
  3 in total
  4 in total

1.  Bis[(E)-4-bromo-2-(ethoxy-imino-meth-yl)phenolato-κN,O]copper(II).

Authors:  Shang-Sheng Gong; Wen-Kui Dong; Jun-Feng Tong; Li Li; Jian-Chao Wu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-31

2.  Bis{(E)-4-chloro-2-[(2-chloro-3-pyrid-yl)imino-methyl-κN]phenolato-κO}copper(II).

Authors:  Yu-Jie Ding; Jun-Feng Tong; Wen-Kui Dong; Yin-Xia Sun; Jian Yao
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-31

3.  Bis{(E)-2-[(2-chloro-3-pyrid-yl)imino-meth-yl]-6-meth-oxy-phenolato-κN,O}copper(II).

Authors:  Wen-Kui Dong; Yuan Wang; Jian-Chao Wu; Shou-Ting Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-12-18

4.  Bis{(E)-2-[1-(eth-oxy-imino)-eth-yl]-1-naphtho-lato-κN,O}copper(II).

Authors:  Wen-Kui Dong; Xiu-Yan Dong; Yin-Xia Sun; Jian-Chao Wu; Si-Jia Xing
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-11-24
  4 in total

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