Literature DB >> 21583310

Bis{(E)-4-chloro-2-[(2-chloro-3-pyrid-yl)imino-methyl-κN]phenolato-κO}copper(II).

Yu-Jie Ding, Jun-Feng Tong, Wen-Kui Dong, Yin-Xia Sun, Jian Yao.   

Abstract

In the title complex, [Cu(n class="Chemical">C(12)H(7)Cl(2)N(2)O)(2)], the Cu(II) center is tetra-coordinated by two phenolic O and two azomethine N atoms from two bidentate 4-chloro-2-[(2-chloro-3-pyrid-yl)imino-meth-yl]phenolate (L) ligands. In the crystal structure, the Cu(II) atom has a distorted square-planar coordination environment. The dihedral angles between the benzene and pyridyl rings are 54.39 (3) and 80.14 (4)°, indicating that the pyridine ring has a considerably weaker steric hindrance. The packing of the mol-ecule is controlled by C-H⋯π(Ph) inter-actions and short O⋯Cl inter-actions [3.196 (4) Å], linking the mol-ecules into a chain-like structure along the c axis.

Entities:  

Year:  2009        PMID: 21583310      PMCID: PMC2977127          DOI: 10.1107/S1600536809029651

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to Schiff bases, see: Soliman & Mohamed (2004 ▶); Abd El-Wahab et al. (2004 ▶). For the synthesis, see: Dong et al. (2009d ▶). For related structures, see: Dong et al. (2009 ▶).

Experimental

Crystal data

[Cu(C12H7Cl2N2O)2] M = 595.73 Monoclinic, a = 20.236 (2) Å b = 11.4821 (14) Å c = 10.5458 (9) Å β = 90.132 (2)° V = 2450.3 (4) Å3 Z = 4 Mo Kα radiation μ = 1.36 mm−1 T = 298 K 0.40 × 0.14 × 0.09 mm

Data collection

Buker SMART 1000 CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.613, T max = 0.888 12294 measured reflections 4320 independent reflections 2614 reflections with I > 2σ(I) R int = 0.058

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.065 S = 1.02 4320 reflections 316 parameters H-atom parameters constrained Δρmax = 0.42 e Å−3 Δρmin = −0.39 e Å−3 Data collection: SMART (Siemens, 1996 ▶); cell refinement: SAINT (Siemens, 1996 ▶); data reduction: SAIn class="Chemical">NT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809029651/at2850sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809029651/at2850Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C12H7Cl2N2O)2]F(000) = 1196
Mr = 595.73Dx = 1.615 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2435 reflections
a = 20.236 (2) Åθ = 26.2–25.3°
b = 11.4821 (14) ŵ = 1.36 mm1
c = 10.5458 (9) ÅT = 298 K
β = 90.132 (2)°Needle-like, brown
V = 2450.3 (4) Å30.40 × 0.14 × 0.09 mm
Z = 4
Buker SMART 1000 CCD area-detector diffractometer4320 independent reflections
Radiation source: fine-focus sealed tube2614 reflections with I > 2σ(I)
graphiteRint = 0.058
φ and ω scansθmax = 25.0°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −24→19
Tmin = 0.613, Tmax = 0.888k = −13→13
12294 measured reflectionsl = −12→12
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.065H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0103P)2] where P = (Fo2 + 2Fc2)/3
4320 reflections(Δ/σ)max = 0.001
316 parametersΔρmax = 0.42 e Å3
0 restraintsΔρmin = −0.39 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.75122 (2)0.77649 (3)0.42109 (4)0.04479 (14)
Cl10.85318 (5)0.19528 (7)0.24296 (11)0.0748 (4)
Cl20.69809 (5)0.87831 (8)0.16425 (10)0.0715 (3)
Cl30.63434 (5)1.36121 (8)0.53290 (13)0.0847 (4)
Cl40.87717 (5)0.87627 (9)0.20907 (10)0.0712 (3)
N10.69574 (13)0.6664 (2)0.3246 (3)0.0404 (7)
N20.5723 (2)0.8484 (3)0.1640 (4)0.0824 (12)
N30.81090 (13)0.9095 (2)0.4590 (3)0.0405 (7)
N40.97911 (16)0.8403 (3)0.3522 (3)0.0580 (9)
O10.82307 (10)0.67264 (18)0.4291 (2)0.0496 (7)
O20.67527 (11)0.85984 (17)0.4727 (2)0.0475 (7)
C10.71125 (17)0.5582 (3)0.3021 (3)0.0434 (9)
H10.67950.51160.26340.052*
C20.77345 (17)0.5055 (3)0.3324 (3)0.0402 (9)
C30.82696 (17)0.5658 (3)0.3882 (3)0.0387 (9)
C40.88764 (17)0.5059 (3)0.3980 (3)0.0493 (10)
H40.92340.54340.43550.059*
C50.89566 (19)0.3951 (3)0.3546 (4)0.0515 (10)
H50.93660.35870.36120.062*
C60.8432 (2)0.3370 (3)0.3011 (4)0.0507 (11)
C70.78289 (18)0.3887 (3)0.2908 (3)0.0479 (10)
H70.74760.34740.25640.057*
C80.62746 (19)0.8039 (3)0.2075 (4)0.0560 (11)
C90.63246 (18)0.7033 (3)0.2809 (3)0.0459 (10)
C100.5749 (2)0.6457 (3)0.3112 (4)0.0635 (12)
H100.57570.57910.36140.076*
C110.5154 (2)0.6894 (4)0.2649 (5)0.0825 (15)
H110.47560.65190.28100.099*
C120.5177 (3)0.7896 (5)0.1948 (5)0.0967 (18)
H120.47770.81950.16610.116*
C130.79004 (17)1.0141 (3)0.4799 (3)0.0432 (9)
H130.82211.07110.49220.052*
C140.72224 (17)1.0512 (3)0.4859 (3)0.0398 (9)
C150.66883 (18)0.9718 (3)0.4849 (3)0.0421 (9)
C160.60489 (17)1.0190 (3)0.5003 (3)0.0522 (11)
H160.56880.96890.50070.063*
C170.59427 (18)1.1356 (3)0.5146 (4)0.0575 (11)
H170.55151.16390.52450.069*
C180.64736 (19)1.2118 (3)0.5142 (4)0.0531 (11)
C190.71064 (18)1.1714 (3)0.5010 (3)0.0489 (10)
H190.74591.22330.50210.059*
C200.91648 (19)0.8681 (3)0.3548 (4)0.0453 (10)
C210.88043 (17)0.8917 (3)0.4636 (4)0.0403 (9)
C220.91409 (18)0.8877 (3)0.5758 (4)0.0525 (10)
H220.89230.90290.65160.063*
C230.98051 (19)0.8610 (3)0.5768 (4)0.0582 (11)
H231.00440.85940.65220.070*
C241.01031 (19)0.8367 (3)0.4626 (5)0.0594 (12)
H241.05480.81660.46310.071*
U11U22U33U12U13U23
Cu10.0435 (3)0.0421 (2)0.0487 (3)0.0027 (2)−0.0027 (2)−0.0051 (3)
Cl10.0885 (8)0.0468 (6)0.0891 (9)0.0160 (6)0.0088 (7)−0.0087 (6)
Cl20.0949 (9)0.0575 (6)0.0622 (8)0.0006 (6)−0.0049 (6)0.0104 (6)
Cl30.0771 (8)0.0416 (5)0.1354 (12)0.0083 (5)0.0144 (8)−0.0066 (7)
Cl40.0742 (8)0.0955 (7)0.0439 (7)0.0157 (6)0.0002 (6)−0.0041 (6)
N10.0402 (19)0.0404 (17)0.041 (2)0.0038 (14)−0.0034 (15)−0.0013 (15)
N20.077 (3)0.082 (3)0.088 (3)0.029 (2)−0.037 (3)−0.017 (2)
N30.0379 (19)0.0411 (16)0.042 (2)0.0045 (14)−0.0024 (15)−0.0052 (15)
N40.047 (2)0.067 (2)0.060 (3)0.0051 (18)0.0065 (19)−0.003 (2)
O10.0427 (15)0.0416 (13)0.0644 (19)0.0052 (12)−0.0101 (13)−0.0088 (13)
O20.0440 (15)0.0368 (13)0.0616 (19)0.0004 (12)0.0039 (13)−0.0083 (13)
C10.042 (2)0.047 (2)0.041 (3)−0.0048 (19)−0.0006 (19)0.0013 (19)
C20.042 (2)0.040 (2)0.038 (2)0.0023 (18)0.0029 (19)−0.0009 (19)
C30.038 (2)0.044 (2)0.035 (2)0.0022 (18)0.0044 (18)0.0038 (19)
C40.041 (2)0.056 (2)0.051 (3)0.006 (2)−0.0053 (19)0.002 (2)
C50.052 (3)0.050 (2)0.052 (3)0.017 (2)0.006 (2)0.007 (2)
C60.062 (3)0.040 (2)0.050 (3)0.014 (2)0.008 (2)0.000 (2)
C70.058 (3)0.045 (2)0.041 (3)0.000 (2)0.002 (2)0.0018 (19)
C80.058 (3)0.057 (3)0.053 (3)0.021 (2)−0.010 (2)−0.012 (2)
C90.044 (3)0.052 (2)0.042 (3)0.010 (2)−0.006 (2)−0.011 (2)
C100.047 (3)0.074 (3)0.069 (3)0.004 (2)−0.003 (2)−0.018 (2)
C110.047 (3)0.107 (4)0.094 (4)0.001 (3)−0.004 (3)−0.031 (3)
C120.060 (4)0.120 (5)0.109 (5)0.040 (4)−0.035 (3)−0.038 (4)
C130.044 (2)0.045 (2)0.041 (3)−0.0035 (19)0.0015 (19)0.0000 (19)
C140.038 (2)0.041 (2)0.040 (2)0.0049 (18)0.0003 (18)−0.0015 (18)
C150.040 (2)0.048 (2)0.038 (2)0.0036 (19)−0.0011 (18)−0.0047 (19)
C160.041 (2)0.048 (2)0.067 (3)−0.0001 (19)0.002 (2)−0.001 (2)
C170.046 (3)0.053 (2)0.074 (3)0.006 (2)−0.001 (2)−0.004 (2)
C180.050 (3)0.035 (2)0.074 (3)0.008 (2)0.003 (2)−0.006 (2)
C190.049 (2)0.042 (2)0.056 (3)−0.0046 (19)−0.001 (2)0.003 (2)
C200.050 (3)0.043 (2)0.043 (3)0.0017 (19)0.001 (2)−0.0012 (19)
C210.042 (2)0.036 (2)0.043 (3)−0.0001 (18)−0.001 (2)−0.0007 (19)
C220.053 (3)0.056 (2)0.048 (3)0.000 (2)−0.002 (2)0.000 (2)
C230.050 (3)0.061 (2)0.063 (3)−0.003 (2)−0.014 (2)0.007 (2)
C240.044 (3)0.057 (3)0.077 (4)−0.002 (2)0.004 (3)0.005 (3)
Cu1—O11.882 (2)C6—C71.361 (4)
Cu1—O21.892 (2)C7—H70.9300
Cu1—N11.972 (3)C8—C91.394 (5)
Cu1—N31.987 (3)C9—C101.379 (4)
Cl1—C61.751 (3)C10—C111.391 (5)
Cl2—C81.727 (4)C10—H100.9300
Cl3—C181.747 (3)C11—C121.368 (6)
Cl4—C201.731 (4)C11—H110.9300
N1—C11.303 (3)C12—H120.9300
N1—C91.424 (4)C13—C141.438 (4)
N2—C81.309 (4)C13—H130.9300
N2—C121.336 (5)C14—C191.409 (4)
N3—C131.292 (3)C14—C151.414 (4)
N3—C211.422 (4)C15—C161.413 (4)
N4—C201.307 (4)C16—C171.365 (4)
N4—C241.324 (5)C16—H160.9300
O1—C31.303 (3)C17—C181.385 (4)
O2—C151.298 (3)C17—H170.9300
C1—C21.432 (4)C18—C191.369 (4)
C1—H10.9300C19—H190.9300
C2—C31.413 (4)C20—C211.388 (4)
C2—C71.423 (4)C21—C221.365 (5)
C3—C41.411 (4)C22—C231.379 (4)
C4—C51.362 (4)C22—H220.9300
C4—H40.9300C23—C241.376 (5)
C5—C61.374 (5)C23—H230.9300
C5—H50.9300C24—H240.9300
O1—Cu1—O2159.31 (10)C9—C10—H10120.8
O1—Cu1—N193.20 (11)C11—C10—H10120.8
O2—Cu1—N190.63 (10)C12—C11—C10117.6 (5)
O1—Cu1—N390.50 (10)C12—C11—H11121.2
O2—Cu1—N392.70 (10)C10—C11—H11121.2
N1—Cu1—N3160.32 (11)N2—C12—C11125.8 (5)
C1—N1—C9116.2 (3)N2—C12—H12117.1
C1—N1—Cu1124.6 (3)C11—C12—H12117.1
C9—N1—Cu1119.1 (2)N3—C13—C14126.5 (3)
C8—N2—C12115.0 (4)N3—C13—H13116.7
C13—N3—C21116.8 (3)C14—C13—H13116.7
C13—N3—Cu1123.4 (2)C19—C14—C15120.3 (3)
C21—N3—Cu1119.8 (2)C19—C14—C13117.0 (3)
C20—N4—C24116.7 (3)C15—C14—C13122.5 (3)
C3—O1—Cu1129.0 (2)O2—C15—C16118.9 (3)
C15—O2—Cu1127.7 (2)O2—C15—C14124.2 (3)
N1—C1—C2125.1 (3)C16—C15—C14116.9 (3)
N1—C1—H1117.5C17—C16—C15122.3 (3)
C2—C1—H1117.5C17—C16—H16118.9
C3—C2—C7119.1 (3)C15—C16—H16118.9
C3—C2—C1123.9 (3)C16—C17—C18119.8 (3)
C7—C2—C1116.6 (3)C16—C17—H17120.1
O1—C3—C4119.2 (3)C18—C17—H17120.1
O1—C3—C2123.6 (3)C19—C18—C17120.8 (3)
C4—C3—C2117.3 (3)C19—C18—Cl3119.0 (3)
C5—C4—C3122.3 (4)C17—C18—Cl3120.2 (3)
C5—C4—H4118.8C18—C19—C14119.9 (3)
C3—C4—H4118.8C18—C19—H19120.0
C4—C5—C6119.9 (3)C14—C19—H19120.0
C4—C5—H5120.0N4—C20—C21125.2 (4)
C6—C5—H5120.0N4—C20—Cl4116.0 (3)
C7—C6—C5120.9 (3)C21—C20—Cl4118.8 (3)
C7—C6—Cl1118.8 (3)C22—C21—C20116.6 (3)
C5—C6—Cl1120.3 (3)C22—C21—N3121.7 (3)
C6—C7—C2120.5 (3)C20—C21—N3121.4 (4)
C6—C7—H7119.8C21—C22—C23119.9 (4)
C2—C7—H7119.8C21—C22—H22120.1
N2—C8—C9125.4 (4)C23—C22—H22120.1
N2—C8—Cl2114.8 (4)C24—C23—C22117.9 (4)
C9—C8—Cl2119.8 (3)C24—C23—H23121.0
C10—C9—C8117.8 (4)C22—C23—H23121.0
C10—C9—N1122.8 (4)N4—C24—C23123.6 (4)
C8—C9—N1119.4 (3)N4—C24—H24118.2
C9—C10—C11118.4 (4)C23—C24—H24118.2
O1—Cu1—N1—C18.0 (3)C1—N1—C9—C1053.3 (5)
O2—Cu1—N1—C1−151.7 (3)Cu1—N1—C9—C10−123.5 (3)
N3—Cu1—N1—C1108.5 (4)C1—N1—C9—C8−128.7 (3)
O1—Cu1—N1—C9−175.6 (3)Cu1—N1—C9—C854.5 (4)
O2—Cu1—N1—C924.8 (3)C8—C9—C10—C111.3 (5)
N3—Cu1—N1—C9−75.0 (4)N1—C9—C10—C11179.3 (3)
O1—Cu1—N3—C13−173.1 (3)C9—C10—C11—C12−1.9 (6)
O2—Cu1—N3—C13−13.5 (3)C8—N2—C12—C11−0.6 (7)
N1—Cu1—N3—C1385.9 (4)C10—C11—C12—N21.7 (8)
O1—Cu1—N3—C217.2 (3)C21—N3—C13—C14−176.9 (3)
O2—Cu1—N3—C21166.8 (3)Cu1—N3—C13—C143.4 (5)
N1—Cu1—N3—C21−93.7 (4)N3—C13—C14—C19−175.7 (4)
O2—Cu1—O1—C396.9 (4)N3—C13—C14—C158.2 (6)
N1—Cu1—O1—C3−3.4 (3)Cu1—O2—C15—C16167.6 (2)
N3—Cu1—O1—C3−164.1 (3)Cu1—O2—C15—C14−13.5 (5)
O1—Cu1—O2—C15117.5 (3)C19—C14—C15—O2−179.2 (3)
N1—Cu1—O2—C15−141.7 (3)C13—C14—C15—O2−3.3 (6)
N3—Cu1—O2—C1518.9 (3)C19—C14—C15—C16−0.3 (5)
C9—N1—C1—C2176.8 (3)C13—C14—C15—C16175.6 (3)
Cu1—N1—C1—C2−6.7 (5)O2—C15—C16—C17179.5 (3)
N1—C1—C2—C3−1.7 (5)C14—C15—C16—C170.5 (6)
N1—C1—C2—C7−175.0 (3)C15—C16—C17—C180.0 (6)
Cu1—O1—C3—C4176.4 (2)C16—C17—C18—C19−0.7 (6)
Cu1—O1—C3—C2−2.9 (5)C16—C17—C18—Cl3−179.8 (3)
C7—C2—C3—O1−180.0 (3)C17—C18—C19—C140.9 (6)
C1—C2—C3—O16.9 (5)Cl3—C18—C19—C14180.0 (3)
C7—C2—C3—C40.8 (5)C15—C14—C19—C18−0.3 (6)
C1—C2—C3—C4−172.4 (3)C13—C14—C19—C18−176.5 (3)
O1—C3—C4—C5−178.5 (3)C24—N4—C20—C21−1.3 (5)
C2—C3—C4—C50.8 (5)C24—N4—C20—Cl4178.3 (3)
C3—C4—C5—C6−1.2 (6)N4—C20—C21—C221.5 (5)
C4—C5—C6—C7−0.1 (6)Cl4—C20—C21—C22−178.0 (3)
C4—C5—C6—Cl1179.1 (3)N4—C20—C21—N3−173.4 (3)
C5—C6—C7—C21.7 (5)Cl4—C20—C21—N37.1 (4)
Cl1—C6—C7—C2−177.5 (3)C13—N3—C21—C2275.5 (4)
C3—C2—C7—C6−2.0 (5)Cu1—N3—C21—C22−104.8 (3)
C1—C2—C7—C6171.6 (3)C13—N3—C21—C20−109.9 (4)
C12—N2—C8—C9−0.1 (6)Cu1—N3—C21—C2069.8 (4)
C12—N2—C8—Cl2178.5 (3)C20—C21—C22—C23−0.1 (5)
N2—C8—C9—C10−0.3 (6)N3—C21—C22—C23174.8 (3)
Cl2—C8—C9—C10−178.9 (3)C21—C22—C23—C24−1.3 (5)
N2—C8—C9—N1−178.4 (3)C20—N4—C24—C23−0.4 (6)
Cl2—C8—C9—N13.0 (4)C22—C23—C24—N41.7 (6)
D—H···AD—HH···AD···AD—H···A
C22—H22···Cg1i0.932.893.753 (3)155
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C22—H22⋯Cg1i0.932.893.753 (3)155

Symmetry code: (i) . Cg1 is the centroid of the C2–C7 ring.

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  {2,2'-[1,1'-(Ethyl-enedioxy-dinitrilo)diethyl-idyne]di-1-naphtholato}nickel(II).

Authors:  Wen-Kui Dong; Jian-Chao Wu; Jian Yao; Shang-Sheng Gong; Jun-Feng Tong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-20

3.  Co(II), Ce(III) and UO2VI) bis-salicylatothiosemicarbazide complexes: binary and ternary complexes, thermal studies and antimicrobial activity.

Authors:  Z H Abd El-Wahab; Mahmoud M Mashaly; A A Salman; B A El-Shetary; A A Faheim
Journal:  Spectrochim Acta A Mol Biomol Spectrosc       Date:  2004-10       Impact factor: 4.098

4.  {2,2'-[1,1'-(Ethyl-enedioxy-dinitrilo)diethyl-idyne]di-1-naphtholato}copper(II).

Authors:  Wen-Kui Dong; Jian-Chao Wu; Jian Yao; Shang-Sheng Gong; Jun-Feng Tong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-20

5.  Bis{(E)-4-bromo-2-[(2-chloro-3-pyrid-yl)imino-meth-yl]phenolato-κN,O}copper(II).

Authors:  Wen-Kui Dong; Jun-Feng Tong; Li-Li An; Jian-Chao Wu; Jian Yao
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-18
  5 in total
  1 in total

1.  Bis{(E)-2-[(2-chloro-3-pyrid-yl)imino-meth-yl]-6-meth-oxy-phenolato-κN,O}copper(II).

Authors:  Wen-Kui Dong; Yuan Wang; Jian-Chao Wu; Shou-Ting Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-12-18
  1 in total

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