Literature DB >> 21583390

trans-Diaqua-bis[5-carb-oxy-2-(3-pyrid-yl)-1H-imidazole-4-carboxyl-ato-κN,O]iron(II).

Wei Liu, Gang Zhang, Xia Li, Ben-Lai Wu, Hong-Yun Zhang.   

Abstract

In the title complex, [Fe(C(10)H(6)N(3)O(4))(2)(H(2)O)(2)], the Fe(II) atom is located on an inversion centre and is trans-coordinated by two N,O-bidentate 5-carb-oxy-2-(3-pyrid-yl)-1H-imidazole-4-carb-oxy-l-ate ligands and two water mol-ecules, defining a distorted octa-hedral environment. A two-dimensional network of N-H⋯O and O-H⋯O hydrogen bonds extending parallel to (110) helps to stabilize the crystal packing.

Entities:  

Year:  2009        PMID: 21583390      PMCID: PMC2977312          DOI: 10.1107/S1600536809027457

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

N-Heterocyclic carboxylic acids are efficient N/O donors exhibiting versatile coordination modes and hydrogen bonding and can be successively deprotonated, resulting in a large diversity of supra­molecular architectures, see: Gu et al. (2007 ▶); Liu et al. (2004 ▶); Maji et al. (2005 ▶); Rajendiran et al. (2003 ▶); Sun et al. (2005 ▶); Zou et al. (2005 ▶).

Experimental

Crystal data

[Fe(C10H6N3O4)2(H2O)2] M = 556.24 Triclinic, a = 7.0100 (14) Å b = 8.6670 (17) Å c = 9.4110 (19) Å α = 82.28 (3)° β = 83.84 (3)° γ = 70.66 (3)° V = 533.41 (18) Å3 Z = 1 Mo Kα radiation μ = 0.78 mm−1 T = 173 K 0.29 × 0.24 × 0.19 mm

Data collection

Rigaku Mercury CCD diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2000 ▶) T min = 0.826, T max = 0.890 4126 measured reflections 2084 independent reflections 1693 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.105 S = 1.04 2084 reflections 172 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.47 e Å−3 Δρmin = −0.55 e Å−3 Data collection: CrystalClear (Rigaku, 2000 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809027457/bv2118sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809027457/bv2118Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Fe(C10H6N3O4)2(H2O)2]Z = 1
Mr = 556.24F(000) = 284
Triclinic, P1Dx = 1.732 Mg m3
a = 7.0100 (14) ÅMo Kα radiation, λ = 0.71073 Å
b = 8.6670 (17) Åθ = 2.5–28.0°
c = 9.4110 (19) ŵ = 0.78 mm1
α = 82.28 (3)°T = 173 K
β = 83.84 (3)°Block, yellow
γ = 70.66 (3)°0.28 × 0.24 × 0.19 mm
V = 533.41 (18) Å3
Rigaku Mercury CCD diffractometer2084 independent reflections
Radiation source: fine-focus sealed tube1693 reflections with I > 2σ(I)
graphiteRint = 0.023
ω scansθmax = 26.0°, θmin = 2.5°
Absorption correction: multi-scan (CrystalClear; Rigaku, 2000)h = −8→8
Tmin = 0.826, Tmax = 0.890k = −10→10
4126 measured reflectionsl = −11→11
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.105H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.0571P)2 + 0.2007P] where P = (Fo2 + 2Fc2)/3
2084 reflections(Δ/σ)max < 0.001
172 parametersΔρmax = 0.47 e Å3
1 restraintΔρmin = −0.55 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Fe10.50000.50000.00000.03010 (18)
O10.4346 (3)0.7540 (2)−0.09416 (18)0.0407 (5)
O20.2752 (3)1.0178 (2)−0.06408 (18)0.0410 (5)
O30.0627 (3)1.1808 (2)0.12660 (19)0.0408 (5)
O4−0.0530 (3)1.1320 (2)0.35321 (19)0.0466 (5)
O50.7690 (3)0.5052 (2)0.07395 (18)0.0406 (5)
N10.3184 (3)0.6478 (2)0.17970 (19)0.0267 (4)
N20.1534 (3)0.7958 (2)0.3559 (2)0.0280 (5)
H2A0.08410.82140.43190.034*
N30.2740 (3)0.3678 (3)0.6641 (2)0.0357 (5)
C10.3294 (4)0.8639 (3)−0.0195 (2)0.0313 (6)
C20.2649 (3)0.8126 (3)0.1308 (2)0.0258 (5)
C30.1588 (4)0.9068 (3)0.2385 (2)0.0277 (5)
C40.0479 (4)1.0858 (3)0.2420 (3)0.0322 (6)
C50.2483 (3)0.6410 (3)0.3177 (2)0.0259 (5)
C60.2686 (4)0.4921 (3)0.4180 (2)0.0269 (5)
C70.2554 (4)0.4991 (3)0.5672 (2)0.0313 (6)
H30.23210.60260.60110.038*
C80.3003 (4)0.3402 (3)0.3698 (3)0.0332 (6)
H40.30600.33030.27000.040*
C90.3234 (4)0.2031 (3)0.4700 (3)0.0379 (6)
H10.34860.09770.43920.045*
C100.3092 (4)0.2212 (3)0.6157 (3)0.0360 (6)
H20.32500.12680.68330.043*
H5A0.87610.41450.08350.043*
H5B0.75520.57260.13390.043*
H3A0.137 (4)1.128 (3)0.057 (2)0.043*
U11U22U33U12U13U23
Fe10.0395 (3)0.0268 (3)0.0151 (3)0.0007 (2)0.00222 (19)−0.00396 (19)
O10.0548 (12)0.0334 (10)0.0192 (8)0.0012 (9)0.0110 (8)−0.0027 (7)
O20.0584 (12)0.0293 (10)0.0224 (9)−0.0029 (9)0.0075 (8)0.0046 (7)
O30.0584 (13)0.0267 (10)0.0264 (10)−0.0017 (9)0.0053 (8)−0.0029 (7)
O40.0665 (14)0.0351 (10)0.0239 (9)0.0033 (9)0.0048 (9)−0.0113 (8)
O50.0457 (11)0.0410 (11)0.0269 (9)0.0002 (9)−0.0032 (8)−0.0112 (8)
N10.0350 (11)0.0254 (10)0.0140 (9)−0.0028 (9)0.0027 (8)−0.0035 (8)
N20.0352 (11)0.0279 (11)0.0152 (9)−0.0039 (9)0.0064 (8)−0.0052 (8)
N30.0473 (13)0.0365 (12)0.0190 (10)−0.0098 (10)0.0000 (9)0.0003 (9)
C10.0391 (14)0.0307 (13)0.0164 (11)−0.0024 (11)0.0023 (10)−0.0019 (10)
C20.0318 (12)0.0249 (12)0.0145 (11)−0.0025 (10)0.0024 (9)−0.0013 (9)
C30.0342 (13)0.0276 (13)0.0182 (11)−0.0059 (10)0.0001 (9)−0.0030 (9)
C40.0385 (14)0.0304 (13)0.0225 (12)−0.0032 (11)−0.0022 (10)−0.0054 (10)
C50.0304 (12)0.0266 (12)0.0165 (11)−0.0038 (10)0.0008 (9)−0.0039 (9)
C60.0303 (12)0.0290 (13)0.0181 (11)−0.0064 (10)0.0021 (9)−0.0020 (9)
C70.0419 (15)0.0288 (13)0.0204 (12)−0.0075 (11)0.0001 (10)−0.0046 (10)
C80.0447 (15)0.0312 (14)0.0198 (11)−0.0080 (11)0.0048 (10)−0.0051 (10)
C90.0508 (17)0.0270 (13)0.0319 (14)−0.0079 (12)0.0008 (12)−0.0043 (11)
C100.0435 (15)0.0301 (14)0.0285 (13)−0.0075 (12)0.0012 (11)0.0032 (11)
Fe1—O5i2.095 (2)N2—C31.369 (3)
Fe1—O52.095 (2)N2—H2A0.8325
Fe1—O1i2.1764 (19)N3—C71.338 (3)
Fe1—O12.1764 (19)N3—C101.344 (3)
Fe1—N12.2719 (19)C1—C21.493 (3)
Fe1—N1i2.2719 (19)C2—C31.380 (3)
O1—C11.244 (3)C3—C41.490 (3)
O2—C11.284 (3)C5—C61.469 (3)
O3—C41.289 (3)C6—C81.390 (3)
O3—H3A0.868 (10)C6—C71.405 (3)
O4—C41.234 (3)C7—H30.9500
O5—H5A0.8910C8—C91.390 (3)
O5—H5B0.8412C8—H40.9500
N1—C51.339 (3)C9—C101.390 (4)
N1—C21.378 (3)C9—H10.9500
N2—C51.364 (3)C10—H20.9500
O5i—Fe1—O5180.0O2—C1—C2118.6 (2)
O5i—Fe1—O1i90.33 (8)N1—C2—C3110.46 (19)
O5—Fe1—O1i89.67 (8)N1—C2—C1119.4 (2)
O5i—Fe1—O189.67 (8)C3—C2—C1130.1 (2)
O5—Fe1—O190.33 (8)N2—C3—C2105.0 (2)
O1i—Fe1—O1180.00 (9)N2—C3—C4121.4 (2)
O5i—Fe1—N189.91 (7)C2—C3—C4133.4 (2)
O5—Fe1—N190.09 (7)O4—C4—O3124.8 (2)
O1i—Fe1—N1103.66 (7)O4—C4—C3118.2 (2)
O1—Fe1—N176.34 (7)O3—C4—C3117.0 (2)
O5i—Fe1—N1i90.09 (7)N1—C5—N2110.1 (2)
O5—Fe1—N1i89.91 (7)N1—C5—C6126.8 (2)
O1i—Fe1—N1i76.34 (7)N2—C5—C6123.1 (2)
O1—Fe1—N1i103.66 (7)C8—C6—C7117.7 (2)
N1—Fe1—N1i180.000 (1)C8—C6—C5121.7 (2)
C1—O1—Fe1117.71 (15)C7—C6—C5120.7 (2)
C4—O3—H3A113 (2)N3—C7—C6123.6 (2)
Fe1—O5—H5A121.1N3—C7—H3118.2
Fe1—O5—H5B115.7C6—C7—H3118.2
H5A—O5—H5B115.2C9—C8—C6118.9 (2)
C5—N1—C2105.66 (18)C9—C8—H4120.5
C5—N1—Fe1145.46 (16)C6—C8—H4120.5
C2—N1—Fe1108.78 (13)C8—C9—C10119.5 (2)
C5—N2—C3108.75 (19)C8—C9—H1120.2
C5—N2—H2A126.9C10—C9—H1120.2
C3—N2—H2A123.4N3—C10—C9122.2 (2)
C7—N3—C10118.1 (2)N3—C10—H2118.9
O1—C1—O2123.7 (2)C9—C10—H2118.9
O1—C1—C2117.7 (2)
O5i—Fe1—O1—C187.8 (2)N1—C2—C3—N21.7 (3)
O5—Fe1—O1—C1−92.2 (2)C1—C2—C3—N2−176.4 (3)
O1i—Fe1—O1—C1−157 (100)N1—C2—C3—C4−172.4 (3)
N1—Fe1—O1—C1−2.2 (2)C1—C2—C3—C49.5 (5)
N1i—Fe1—O1—C1177.8 (2)N2—C3—C4—O4−1.3 (4)
O5i—Fe1—N1—C595.8 (3)C2—C3—C4—O4172.0 (3)
O5—Fe1—N1—C5−84.2 (3)N2—C3—C4—O3179.7 (2)
O1i—Fe1—N1—C55.5 (3)C2—C3—C4—O3−7.0 (4)
O1—Fe1—N1—C5−174.5 (3)C2—N1—C5—N20.0 (3)
N1i—Fe1—N1—C5−141 (100)Fe1—N1—C5—N2175.5 (2)
O5i—Fe1—N1—C2−88.65 (16)C2—N1—C5—C6−179.4 (2)
O5—Fe1—N1—C291.35 (16)Fe1—N1—C5—C6−3.8 (5)
O1i—Fe1—N1—C2−178.96 (15)C3—N2—C5—N11.1 (3)
O1—Fe1—N1—C21.04 (15)C3—N2—C5—C6−179.5 (2)
N1i—Fe1—N1—C234 (100)N1—C5—C6—C8−23.2 (4)
Fe1—O1—C1—O2−177.8 (2)N2—C5—C6—C8157.6 (2)
Fe1—O1—C1—C22.8 (3)N1—C5—C6—C7157.2 (2)
C5—N1—C2—C3−1.0 (3)N2—C5—C6—C7−22.1 (4)
Fe1—N1—C2—C3−178.39 (16)C10—N3—C7—C60.7 (4)
C5—N1—C2—C1177.3 (2)C8—C6—C7—N30.8 (4)
Fe1—N1—C2—C1−0.1 (3)C5—C6—C7—N3−179.5 (2)
O1—C1—C2—N1−1.8 (4)C7—C6—C8—C9−1.9 (4)
O2—C1—C2—N1178.8 (2)C5—C6—C8—C9178.4 (2)
O1—C1—C2—C3176.1 (3)C6—C8—C9—C101.6 (4)
O2—C1—C2—C3−3.3 (4)C7—N3—C10—C9−1.1 (4)
C5—N2—C3—C2−1.7 (3)C8—C9—C10—N3−0.1 (4)
C5—N2—C3—C4173.3 (2)
D—H···AD—HH···AD···AD—H···A
N2—H2A···O4ii0.832.092.852 (3)152
O5—H5A···O3iii0.892.032.899 (3)165
O5—H5B···N3iv0.842.012.780 (3)152
O3—H3A···O20.87 (1)1.61 (1)2.479 (3)176 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2A⋯O4i0.832.092.852 (3)152
O5—H5A⋯O3ii0.892.032.899 (3)165
O5—H5B⋯N3iii0.842.012.780 (3)152
O3—H3A⋯O20.868 (10)1.613 (11)2.479 (3)176 (3)

Symmetry codes: (i) ; (ii) ; (iii) .

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