Literature DB >> 21583382

Bis(3-hydroxy-pyridine-κN)bis-(3-nitro-benzoato-κO)zinc(II).

Jun-Hua Li1, Jing-Jing Nie, Duan-Jun Xu.   

Abstract

The title complex, [Zn(C(7)H(4)NO(4))(2)(C(5)H(5)NO)(2)], has site symmetry 2. The Zn(II) ion is located on a crystallographic twofold rotation axis and assumes a distorted tetra-hedral ZnN(2)O(2) coordination geometry. Mol-ecules are linked by an inter-molecular O-H⋯O hydrogen bond and π-π stacking inter-actions between pyridine rings [centroid-centroid speparation 3.594 (1) Å].

Entities:  

Year:  2009        PMID: 21583382      PMCID: PMC2977432          DOI: 10.1107/S1600536809027147

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Su & Xu (2004 ▶); Xu et al. (2007 ▶). For a related structure, see: Yan et al. (2008 ▶).

Experimental

Crystal data

[Zn(C7H4NO4)2(C5H5NO)2] M = 587.79 Monoclinic, a = 22.992 (4) Å b = 7.2412 (12) Å c = 15.797 (3) Å β = 111.584 (5)° V = 2445.6 (8) Å3 Z = 4 Mo Kα radiation μ = 1.07 mm−1 T = 294 K 0.33 × 0.30 × 0.24 mm

Data collection

Rigaku R-AXIS RAPID IP diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.655, T max = 0.770 10172 measured reflections 2179 independent reflections 2038 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.028 wR(F 2) = 0.080 S = 1.18 2179 reflections 177 parameters H-atom parameters constrained Δρmax = 0.22 e Å−3 Δρmin = −0.37 e Å−3 Data collection: PROCESS-AUTO (Rigaku, 1998 ▶); cell refinement: PROCESS-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002 ▶); program(s) used to solve structure: SIR92 (Altomare et al., 1993 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809027147/bx2223sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809027147/bx2223Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn(C7H4NO4)2(C5H5NO)2]F(000) = 1200
Mr = 587.79Dx = 1.596 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 2092 reflections
a = 22.992 (4) Åθ = 2.0–25.0°
b = 7.2412 (12) ŵ = 1.07 mm1
c = 15.797 (3) ÅT = 294 K
β = 111.584 (5)°Block, colourless
V = 2445.6 (8) Å30.33 × 0.30 × 0.24 mm
Z = 4
Rigaku R-AXIS RAPID IP diffractometer2179 independent reflections
Radiation source: fine-focus sealed tube2038 reflections with I > 2σ(I)
graphiteRint = 0.023
Detector resolution: 10.0 pixels mm-1θmax = 25.2°, θmin = 1.9°
ω scansh = −27→27
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)k = −7→8
Tmin = 0.655, Tmax = 0.770l = −18→18
10172 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.028Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.080H-atom parameters constrained
S = 1.18w = 1/[σ2(Fo2) + (0.0461P)2 + 1.01P] where P = (Fo2 + 2Fc2)/3
2179 reflections(Δ/σ)max < 0.001
177 parametersΔρmax = 0.22 e Å3
0 restraintsΔρmin = −0.37 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Zn0.50000.60825 (4)0.25000.03308 (13)
N10.51519 (7)0.4295 (2)0.15973 (11)0.0353 (4)
N20.76573 (8)0.9962 (2)0.57621 (11)0.0428 (4)
O10.41195 (6)0.2005 (2)−0.04113 (10)0.0502 (4)
H1A0.41510.1741−0.09590.075*
O20.57415 (6)0.7413 (2)0.32834 (9)0.0430 (3)
O30.57500 (8)0.8529 (3)0.19867 (10)0.0582 (4)
O40.73267 (8)0.9305 (3)0.61402 (11)0.0597 (4)
O50.81810 (8)1.0587 (3)0.61763 (12)0.0639 (5)
C10.46440 (9)0.3618 (3)0.09435 (13)0.0376 (4)
H10.42560.38300.09830.045*
C20.46675 (9)0.2612 (3)0.02073 (12)0.0360 (4)
C30.52475 (9)0.2297 (3)0.01547 (13)0.0386 (4)
H30.52830.1659−0.03350.046*
C40.57718 (9)0.2956 (3)0.08477 (14)0.0442 (5)
H40.61660.27290.08340.053*
C50.57162 (9)0.3943 (3)0.15562 (14)0.0402 (5)
H50.60750.43770.20160.048*
C60.59870 (9)0.8367 (3)0.28242 (13)0.0376 (4)
C70.66049 (9)0.9261 (3)0.33534 (13)0.0341 (4)
C80.68297 (9)0.9269 (3)0.43004 (13)0.0341 (4)
H80.65900.87990.46130.041*
C90.74167 (9)0.9988 (3)0.47648 (12)0.0355 (4)
C100.77887 (9)1.0701 (3)0.43250 (15)0.0434 (5)
H100.81851.11680.46540.052*
C110.75552 (11)1.0701 (3)0.33837 (16)0.0491 (5)
H110.77951.11820.30730.059*
C120.69704 (10)0.9994 (3)0.29032 (14)0.0426 (5)
H120.68181.00060.22700.051*
U11U22U33U12U13U23
Zn0.03108 (18)0.0418 (2)0.02401 (18)0.0000.00732 (12)0.000
N10.0354 (8)0.0405 (9)0.0294 (8)0.0019 (7)0.0112 (7)−0.0008 (6)
N20.0417 (9)0.0484 (11)0.0331 (9)0.0088 (8)0.0074 (8)−0.0057 (7)
O10.0417 (8)0.0636 (10)0.0403 (8)−0.0044 (7)0.0091 (6)−0.0163 (7)
O20.0361 (7)0.0557 (9)0.0345 (7)−0.0105 (6)0.0097 (6)−0.0003 (6)
O30.0593 (10)0.0789 (11)0.0279 (8)−0.0163 (8)0.0061 (7)−0.0030 (7)
O40.0613 (10)0.0864 (13)0.0321 (8)0.0003 (9)0.0181 (8)−0.0025 (8)
O50.0444 (9)0.0838 (12)0.0466 (9)−0.0016 (8)−0.0031 (7)−0.0135 (9)
C10.0326 (9)0.0459 (11)0.0346 (10)0.0012 (8)0.0128 (8)−0.0037 (8)
C20.0387 (10)0.0363 (10)0.0311 (9)−0.0001 (8)0.0107 (8)−0.0001 (8)
C30.0471 (11)0.0372 (10)0.0358 (10)0.0031 (8)0.0201 (9)−0.0017 (8)
C40.0369 (10)0.0519 (13)0.0477 (12)0.0064 (9)0.0203 (9)−0.0001 (10)
C50.0323 (9)0.0470 (12)0.0376 (11)0.0017 (8)0.0086 (8)−0.0014 (8)
C60.0374 (10)0.0423 (11)0.0313 (10)−0.0018 (8)0.0106 (8)−0.0048 (8)
C70.0366 (10)0.0374 (10)0.0292 (9)−0.0012 (8)0.0131 (8)−0.0014 (7)
C80.0339 (9)0.0399 (10)0.0310 (10)−0.0013 (8)0.0148 (8)−0.0011 (7)
C90.0359 (9)0.0382 (10)0.0310 (10)0.0033 (8)0.0106 (8)−0.0036 (8)
C100.0329 (10)0.0482 (12)0.0478 (12)−0.0067 (9)0.0133 (9)−0.0054 (9)
C110.0477 (12)0.0589 (14)0.0498 (13)−0.0082 (10)0.0287 (10)0.0030 (10)
C120.0491 (11)0.0501 (12)0.0322 (10)−0.0043 (9)0.0193 (9)0.0011 (9)
Zn—N12.0486 (16)C3—C41.381 (3)
Zn—N1i2.0486 (16)C3—H30.9300
Zn—O21.9527 (13)C4—C51.373 (3)
Zn—O2i1.9527 (13)C4—H40.9300
N1—C11.335 (2)C5—H50.9300
N1—C51.347 (3)C6—C71.504 (3)
N2—O41.223 (2)C7—C121.390 (3)
N2—O51.226 (2)C7—C81.392 (3)
N2—C91.465 (3)C8—C91.379 (3)
O1—C21.353 (2)C8—H80.9300
O1—H1A0.9147C9—C101.385 (3)
O2—C61.274 (2)C10—C111.383 (3)
O3—C61.237 (2)C10—H100.9300
C1—C21.390 (3)C11—C121.377 (3)
C1—H10.9300C11—H110.9300
C2—C31.385 (3)C12—H120.9300
O2—Zn—O2i120.90 (9)C3—C4—H4119.7
O2—Zn—N1114.84 (6)N1—C5—C4121.20 (18)
O2i—Zn—N1101.72 (6)N1—C5—H5119.4
O2—Zn—N1i101.72 (6)C4—C5—H5119.4
O2i—Zn—N1i114.84 (6)O3—C6—O2123.17 (18)
N1—Zn—N1i101.64 (9)O3—C6—C7120.52 (18)
C1—N1—C5118.48 (16)O2—C6—C7116.28 (16)
C1—N1—Zn116.48 (12)C12—C7—C8119.53 (18)
C5—N1—Zn124.53 (13)C12—C7—C6120.34 (17)
O4—N2—O5123.22 (18)C8—C7—C6120.03 (17)
O4—N2—C9118.26 (17)C9—C8—C7118.50 (17)
O5—N2—C9118.52 (18)C9—C8—H8120.8
C2—O1—H1A112.0C7—C8—H8120.8
C6—O2—Zn111.90 (12)C8—C9—C10122.55 (18)
N1—C1—C2123.20 (17)C8—C9—N2118.40 (17)
N1—C1—H1118.4C10—C9—N2119.04 (17)
C2—C1—H1118.4C11—C10—C9118.19 (19)
O1—C2—C3124.38 (17)C11—C10—H10120.9
O1—C2—C1117.54 (17)C9—C10—H10120.9
C3—C2—C1118.08 (17)C12—C11—C10120.46 (19)
C4—C3—C2118.33 (17)C12—C11—H11119.8
C4—C3—H3120.8C10—C11—H11119.8
C2—C3—H3120.8C11—C12—C7120.76 (19)
C5—C4—C3120.66 (18)C11—C12—H12119.6
C5—C4—H4119.7C7—C12—H12119.6
O2—Zn—N1—C1−168.19 (13)Zn—O2—C6—C7−172.72 (13)
O2i—Zn—N1—C1−35.82 (15)O3—C6—C7—C12−11.6 (3)
N1i—Zn—N1—C182.92 (14)O2—C6—C7—C12166.42 (19)
O2—Zn—N1—C53.54 (18)O3—C6—C7—C8171.9 (2)
O2i—Zn—N1—C5135.91 (16)O2—C6—C7—C8−10.1 (3)
N1i—Zn—N1—C5−105.36 (17)C12—C7—C8—C9−0.9 (3)
O2i—Zn—O2—C6−63.65 (13)C6—C7—C8—C9175.64 (17)
N1—Zn—O2—C658.89 (15)C7—C8—C9—C100.1 (3)
N1i—Zn—O2—C6167.73 (14)C7—C8—C9—N2−178.86 (17)
C5—N1—C1—C2−1.9 (3)O4—N2—C9—C80.0 (3)
Zn—N1—C1—C2170.31 (15)O5—N2—C9—C8179.42 (18)
N1—C1—C2—O1−179.81 (18)O4—N2—C9—C10−179.00 (19)
N1—C1—C2—C30.2 (3)O5—N2—C9—C100.4 (3)
O1—C2—C3—C4−178.31 (19)C8—C9—C10—C110.6 (3)
C1—C2—C3—C41.7 (3)N2—C9—C10—C11179.55 (19)
C2—C3—C4—C5−1.9 (3)C9—C10—C11—C12−0.5 (3)
C1—N1—C5—C41.8 (3)C10—C11—C12—C7−0.3 (3)
Zn—N1—C5—C4−169.79 (15)C8—C7—C12—C111.0 (3)
C3—C4—C5—N10.1 (3)C6—C7—C12—C11−175.53 (19)
Zn—O2—C6—O35.2 (3)
D—H···AD—HH···AD···AD—H···A
O1—H1A···O3ii0.911.732.642 (2)174
Table 1

Selected bond lengths (Å)

Zn—N12.0486 (16)
Zn—O21.9527 (13)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1A⋯O3i0.911.732.642 (2)174

Symmetry code: (i) .

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