Literature DB >> 21202198

Poly[(μ-3,5-dinitro-2-oxidobenzoato)(μ-3-hydroxy-pyridine)copper(II)].

Jian-Bin Yan1, Wen-Dong Song, Hao Wang, Li-Li Ji.   

Abstract

A new coordination polymer, [Cu(C(7)H(2)N(2)O(7))(C(5)H(5)NO)](n), exhibits a double-chain structure, in which 3,5-dinitro-2-oxidobenzoate and 3-hydroxy-pyridine both act as bridging ligands, -connecting adjacent copper(II) centers to form an infinite double-stranded chain. The asymmetric unit contains one Cu(II) ion, one 3,5-dinitro-2-oxidobenzoate ligand and a 3-hydroxy-pyridine ligand. Coordination by one N atom and three O atoms from two different 3,5-dinitro-2-oxidobenzoate ligands and a 3-hydroxy-pyridine ligand creates a square-planar Cu(II) center, which is augmented by a less tightly bonded fifth phenol O atom to form a square-pyramidal five-coordinate complex with an essentially planar base. The double-stranded chains are stabilized by intra-chain π-π inter-actions [the centroid-to-centroid distance between adjacent aromatic rings is 3.719 (7) Å], and further linked through O-H⋯O hydrogen bonds, forming a three-dimensional supra-molecular network.

Entities:  

Year:  2008        PMID: 21202198      PMCID: PMC2961115          DOI: 10.1107/S1600536808009392

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Bradshaw et al. (2005 ▶); Eddaoudi et al. (2001 ▶); Fujita et al. (1994 ▶); Gable et al. (1990 ▶); Gao et al. (2005 ▶); He et al. (2006 ▶); Li et al. (1999 ▶); Losier & Zaworotko (1996 ▶); Moulton & Zaworotko (2001 ▶); Song & Xi (2006 ▶) Song et al., 2006 ▶; Song, Guo & Guo, 2007 ▶; Song, Guo & He, 2007 ▶; Song, Guo & Zhang, 2007 ▶; Song, Yan et al., 2007 ▶); Stang & Olenyuk (1997 ▶); Withersby et al. (1999 ▶); Yaghi & Li (1995 ▶).

Experimental

Crystal data

[Cu(C7H2N2O7)(C5H5NO)] M = 384.75 Monoclinic, a = 8.1055 (3) Å b = 6.2208 (2) Å c = 26.9837 (9) Å β = 94.030 (3)° V = 1357.23 (8) Å3 Z = 4 Mo Kα radiation μ = 1.66 mm−1 T = 296 (2) K 0.25 × 0.16 × 0.09 mm

Data collection

Bruker APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.681, T max = 0.865 12917 measured reflections 3094 independent reflections 2275 reflections with I > 2σ(I) R int = 0.061

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.092 S = 1.03 3094 reflections 218 parameters H-atom parameters constrained Δρmax = 0.38 e Å−3 Δρmin = −0.45 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 2001 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808009392/zl2099sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808009392/zl2099Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C7H2N2O7)(C5H5NO)]F000 = 772
Mr = 384.75Dx = 1.883 Mg m3
Monoclinic, P21/nMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 2895 reflections
a = 8.1055 (3) Åθ = 2.4–27.9º
b = 6.2208 (2) ŵ = 1.66 mm1
c = 26.9837 (9) ÅT = 296 (2) K
β = 94.030 (3)ºPlate, blue
V = 1357.23 (8) Å30.25 × 0.16 × 0.09 mm
Z = 4
Bruker APEXII area-detector diffractometer3094 independent reflections
Radiation source: fine-focus sealed tube2275 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.061
T = 296(2) Kθmax = 27.5º
φ and ω scansθmin = 2.6º
Absorption correction: multi-scan(SADABS; Sheldrick, 1996)h = −10→10
Tmin = 0.681, Tmax = 0.865k = −8→8
12917 measured reflectionsl = −31→34
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.040H-atom parameters constrained
wR(F2) = 0.092  w = 1/[σ2(Fo2) + (0.0416P)2] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max < 0.001
3094 reflectionsΔρmax = 0.38 e Å3
218 parametersΔρmin = −0.45 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.12663 (5)0.27589 (5)0.187438 (14)0.02720 (13)
O10.2121 (3)0.3893 (3)0.12851 (7)0.0336 (5)
C30.4627 (4)0.8652 (4)0.15767 (12)0.0300 (7)
H30.51680.93530.18460.036*
C70.2967 (4)0.5637 (4)0.12445 (11)0.0266 (6)
C20.3785 (4)0.6762 (4)0.16517 (11)0.0257 (6)
C60.3114 (4)0.6587 (4)0.07688 (11)0.0303 (7)
C50.3921 (4)0.8497 (5)0.06963 (12)0.0339 (7)
H50.39570.90890.03810.041*
C40.4673 (4)0.9503 (4)0.11085 (12)0.0319 (7)
N20.2313 (3)0.5572 (4)0.03232 (10)0.0383 (7)
N30.5560 (3)1.1514 (4)0.10454 (13)0.0432 (7)
O50.5735 (3)1.2190 (4)0.06299 (10)0.0593 (8)
O40.6093 (3)1.2453 (3)0.14266 (11)0.0569 (7)
O60.1611 (3)0.6731 (4)0.00078 (10)0.0580 (7)
O70.2381 (4)0.3631 (4)0.02875 (9)0.0591 (7)
N10.0150 (3)0.0378 (3)0.14852 (9)0.0280 (6)
C10−0.1449 (4)−0.2943 (4)0.09616 (13)0.0354 (8)
H10−0.1983−0.40560.07850.043*
C8−0.0260 (4)−0.1437 (4)0.17174 (12)0.0308 (7)
H8−0.0007−0.15660.20580.037*
C9−0.1048 (4)−0.3115 (4)0.14630 (12)0.0294 (7)
C12−0.0227 (4)0.0547 (4)0.09966 (12)0.0335 (7)
H120.00640.17900.08320.040*
C11−0.1036 (4)−0.1078 (5)0.07304 (13)0.0377 (8)
H11−0.1303−0.09070.03920.045*
O8−0.1323 (3)−0.4927 (3)0.17369 (9)0.0429 (6)
H8A−0.2046−0.56570.15910.064*
C10.3686 (4)0.6059 (4)0.21742 (11)0.0272 (7)
O20.2620 (3)0.4681 (3)0.22901 (8)0.0378 (5)
O30.4641 (2)0.6940 (3)0.25017 (8)0.0290 (5)
U11U22U33U12U13U23
Cu10.0369 (2)0.02288 (17)0.0209 (2)−0.00557 (14)−0.00425 (16)0.00164 (14)
O10.0472 (14)0.0299 (10)0.0231 (12)−0.0138 (9)−0.0003 (10)−0.0021 (8)
C30.0300 (17)0.0254 (13)0.034 (2)−0.0014 (11)−0.0011 (14)−0.0047 (12)
C70.0291 (17)0.0262 (13)0.0241 (17)−0.0016 (11)−0.0008 (13)−0.0019 (11)
C20.0298 (17)0.0255 (13)0.0215 (17)−0.0004 (11)−0.0002 (13)−0.0009 (11)
C60.0342 (18)0.0365 (15)0.0195 (18)−0.0052 (12)−0.0021 (14)−0.0005 (12)
C50.0335 (19)0.0391 (15)0.0294 (19)−0.0064 (13)0.0038 (15)0.0076 (14)
C40.0291 (17)0.0282 (13)0.038 (2)−0.0066 (12)0.0038 (15)0.0039 (13)
N20.0425 (17)0.0507 (16)0.0216 (16)−0.0148 (13)0.0006 (13)−0.0006 (12)
N30.0349 (17)0.0343 (13)0.060 (2)−0.0077 (12)0.0038 (16)0.0058 (14)
O50.0653 (19)0.0535 (14)0.060 (2)−0.0221 (12)0.0112 (15)0.0213 (13)
O40.0575 (17)0.0447 (13)0.068 (2)−0.0267 (11)0.0005 (15)−0.0063 (12)
O60.0634 (19)0.0757 (17)0.0321 (16)−0.0060 (14)−0.0154 (13)0.0153 (13)
O70.090 (2)0.0474 (14)0.0379 (17)−0.0132 (13)−0.0070 (15)−0.0116 (12)
N10.0331 (15)0.0236 (11)0.0265 (15)−0.0028 (9)−0.0037 (11)0.0018 (10)
C100.0395 (19)0.0282 (14)0.037 (2)−0.0087 (12)−0.0082 (16)−0.0089 (13)
C80.0362 (18)0.0258 (13)0.0291 (19)−0.0049 (12)−0.0072 (15)0.0043 (12)
C90.0279 (17)0.0246 (13)0.035 (2)−0.0017 (11)−0.0038 (14)0.0030 (12)
C120.0430 (19)0.0294 (14)0.0269 (19)−0.0071 (13)−0.0052 (15)−0.0006 (12)
C110.045 (2)0.0382 (16)0.0282 (19)−0.0047 (14)−0.0052 (16)−0.0036 (14)
O80.0481 (16)0.0281 (10)0.0501 (16)−0.0143 (9)−0.0124 (12)0.0091 (10)
C10.0321 (17)0.0246 (13)0.0242 (18)0.0024 (11)−0.0024 (14)−0.0046 (11)
O20.0511 (15)0.0399 (11)0.0214 (12)−0.0187 (10)−0.0040 (10)0.0005 (9)
O30.0315 (12)0.0313 (10)0.0231 (12)−0.0031 (8)−0.0055 (9)−0.0073 (8)
Cu1—O11.9132 (19)N3—O51.215 (4)
Cu1—O21.929 (2)N3—O41.234 (4)
Cu1—O3i1.952 (2)N1—C121.336 (4)
Cu1—N11.996 (2)N1—C81.344 (3)
O1—C71.292 (3)C10—C111.370 (4)
C3—C41.373 (4)C10—C91.373 (5)
C3—C21.382 (4)C10—H100.9300
C3—H30.9300C8—C91.381 (4)
C7—C61.426 (4)C8—H80.9300
C7—C21.426 (4)C9—O81.375 (3)
C2—C11.484 (4)C12—C111.379 (4)
C6—C51.377 (4)C12—H120.9300
C6—N21.468 (4)C11—H110.9300
C5—C41.380 (4)O8—H8A0.8200
C5—H50.9300C1—O31.259 (3)
C4—N31.459 (3)C1—O21.271 (3)
N2—O71.213 (3)O3—Cu1ii1.952 (2)
N2—O61.224 (3)
O1—Cu1—O291.74 (8)O5—N3—O4123.3 (3)
O1—Cu1—O3i173.49 (8)O5—N3—C4119.7 (3)
O2—Cu1—O3i83.90 (8)O4—N3—C4117.1 (3)
O1—Cu1—N190.78 (9)C12—N1—C8118.6 (2)
O2—Cu1—N1169.99 (10)C12—N1—Cu1121.62 (18)
O3i—Cu1—N194.34 (9)C8—N1—Cu1119.7 (2)
C7—O1—Cu1127.25 (19)C11—C10—C9117.8 (3)
C4—C3—C2120.6 (3)C11—C10—H10121.1
C4—C3—H3119.7C9—C10—H10121.1
C2—C3—H3119.7N1—C8—C9121.6 (3)
O1—C7—C6120.2 (3)N1—C8—H8119.2
O1—C7—C2124.6 (3)C9—C8—H8119.2
C6—C7—C2115.2 (2)C10—C9—O8123.9 (3)
C3—C2—C7120.8 (3)C10—C9—C8120.0 (3)
C3—C2—C1116.8 (3)O8—C9—C8116.1 (3)
C7—C2—C1122.3 (2)N1—C12—C11121.6 (3)
C5—C6—C7123.8 (3)N1—C12—H12119.2
C5—C6—N2116.2 (3)C11—C12—H12119.2
C7—C6—N2119.9 (2)C10—C11—C12120.4 (3)
C6—C5—C4117.7 (3)C10—C11—H11119.8
C6—C5—H5121.2C12—C11—H11119.8
C4—C5—H5121.2C9—O8—H8A109.5
C3—C4—C5121.8 (3)O3—C1—O2121.0 (3)
C3—C4—N3118.9 (3)O3—C1—C2117.9 (3)
C5—C4—N3119.2 (3)O2—C1—C2121.0 (3)
O7—N2—O6123.5 (3)C1—O2—Cu1130.1 (2)
O7—N2—C6118.2 (3)C1—O3—Cu1ii117.95 (19)
O6—N2—C6118.2 (3)
D—H···AD—HH···AD···AD—H···A
O8—H8A···O4iii0.821.942.738 (3)165
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O8—H8A⋯O4i0.821.942.738 (3)165

Symmetry code: (i) .

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