| Literature DB >> 21583317 |
Abstract
The crystal structure of the title Fe(II) complex, [Fe(NCS)(2)(C(7)H(8)N(4)S)(2)(CH(3)CH(2)OH)(2)]·2C(7)H(8)N(4)S, based on the Schiff base ligand pyridine-3-carbaldehyde thio-semicarbazone (pct), results from the cocrystallization of an Fe(II) coordination compound together with two of the pct ligands. The complex unit is mononuclear, with the central Fe(II) ion located on a crystallographic centre of inversion and coordinated by four N atoms from two pct ligands and two thio-cyanate anions. The slightly distorted octa-hedral coordination is completed by two O atoms from ethanol mol-ecules. The crystal packing is accomplished inter-molecular N-H⋯S hydrogen bonds.Entities:
Year: 2009 PMID: 21583317 PMCID: PMC2977344 DOI: 10.1107/S1600536809024076
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Fe(NCS)2(C7H8N4S)2(C2H6O)2]·2C7H8N4S | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 3773 reflections | |
| θ = 2.3–26.9° | |
| µ = 0.65 mm−1 | |
| α = 87.341 (8)° | |
| β = 88.191 (8)° | Block, dark green |
| γ = 69.604 (8)° | 0.32 × 0.26 × 0.22 mm |
| Bruker SMART CCD area-detector diffractometer | 4037 independent reflections |
| Radiation source: fine-focus sealed tube | 2953 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.0°, θmin = 1.4° |
| Absorption correction: multi-scan ( | |
| 8300 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 4037 reflections | (Δ/σ)max = 0.001 |
| 282 parameters | Δρmax = 0.43 e Å−3 |
| 1 restraint | Δρmin = −0.24 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Fe1 | 0.5000 | 0.0000 | 0.0000 | 0.0416 (2) | |
| N1 | 0.2848 (3) | 0.1196 (3) | 0.09806 (16) | 0.0410 (6) | |
| N2 | 0.1975 (3) | −0.0995 (3) | 0.33648 (15) | 0.0389 (6) | |
| N3 | 0.1640 (3) | −0.1698 (3) | 0.41443 (16) | 0.0413 (6) | |
| H3 | 0.0676 | −0.1382 | 0.4397 | 0.050* | |
| N4 | 0.4186 (3) | −0.3344 (3) | 0.40767 (19) | 0.0659 (9) | |
| H4A | 0.4316 | −0.2885 | 0.3557 | 0.079* | |
| H4B | 0.4981 | −0.4112 | 0.4298 | 0.079* | |
| N5 | 0.5606 (3) | −0.2022 (3) | 0.08302 (19) | 0.0536 (7) | |
| C12 | 0.7900 (4) | 0.3134 (4) | 0.8792 (2) | 0.0604 (9) | |
| H12 | 0.6944 | 0.3331 | 0.9150 | 0.072* | |
| N7 | 0.8316 (3) | 0.5754 (3) | 0.64455 (16) | 0.0424 (6) | |
| N8 | 0.8582 (3) | 0.6617 (3) | 0.57213 (17) | 0.0453 (6) | |
| H8 | 0.9546 | 0.6403 | 0.5474 | 0.054* | |
| N9 | 0.5924 (3) | 0.7961 (3) | 0.5738 (2) | 0.0652 (8) | |
| H9A | 0.5814 | 0.7316 | 0.6163 | 0.078* | |
| H9B | 0.5080 | 0.8711 | 0.5547 | 0.078* | |
| O1 | 0.6741 (3) | 0.0634 (3) | 0.07601 (15) | 0.0541 (6) | |
| S1 | 0.24701 (9) | −0.36692 (9) | 0.55347 (5) | 0.0500 (2) | |
| S2 | 0.64184 (10) | −0.43494 (10) | 0.21504 (7) | 0.0632 (3) | |
| S3 | 0.76674 (9) | 0.89666 (9) | 0.45668 (6) | 0.0525 (3) | |
| C1 | 0.1770 (4) | 0.2554 (3) | 0.0754 (2) | 0.0457 (7) | |
| H1 | 0.1962 | 0.3076 | 0.0218 | 0.055* | |
| C2 | 0.0403 (4) | 0.3210 (3) | 0.1271 (2) | 0.0471 (7) | |
| H2 | −0.0332 | 0.4165 | 0.1092 | 0.057* | |
| C3 | 0.0117 (3) | 0.2462 (3) | 0.20499 (19) | 0.0416 (7) | |
| H3A | −0.0815 | 0.2902 | 0.2418 | 0.050* | |
| C4 | 0.1196 (3) | 0.1064 (3) | 0.22943 (18) | 0.0354 (6) | |
| C5 | 0.2540 (3) | 0.0486 (3) | 0.17329 (19) | 0.0405 (7) | |
| H5 | 0.3286 | −0.0473 | 0.1895 | 0.049* | |
| C6 | 0.0921 (3) | 0.0255 (3) | 0.3116 (2) | 0.0409 (7) | |
| H6 | −0.0039 | 0.0653 | 0.3468 | 0.049* | |
| C7 | 0.2808 (3) | −0.2882 (3) | 0.4521 (2) | 0.0424 (7) | |
| C8 | 0.5957 (3) | −0.2995 (3) | 0.1376 (2) | 0.0409 (7) | |
| C9 | 0.6438 (4) | 0.1960 (4) | 0.1234 (2) | 0.0602 (9) | |
| H9C | 0.5507 | 0.2751 | 0.0956 | 0.072* | |
| H9D | 0.7375 | 0.2286 | 0.1155 | 0.072* | |
| C10 | 0.6107 (5) | 0.1792 (5) | 0.2242 (3) | 0.0809 (13) | |
| H10A | 0.5138 | 0.1535 | 0.2327 | 0.121* | |
| H10B | 0.5952 | 0.2735 | 0.2538 | 0.121* | |
| H10C | 0.7015 | 0.0997 | 0.2521 | 0.121* | |
| C11 | 0.9244 (4) | 0.1953 (4) | 0.9025 (2) | 0.0577 (9) | |
| H11 | 0.9201 | 0.1350 | 0.9557 | 0.069* | |
| N6 | 1.0609 (3) | 0.1611 (3) | 0.85410 (18) | 0.0512 (7) | |
| C13 | 1.0645 (4) | 0.2479 (3) | 0.7803 (2) | 0.0457 (7) | |
| H13 | 1.1613 | 0.2244 | 0.7453 | 0.055* | |
| C14 | 0.9344 (3) | 0.3714 (3) | 0.7514 (2) | 0.0404 (7) | |
| C15 | 0.7945 (4) | 0.4035 (4) | 0.8032 (2) | 0.0533 (8) | |
| H15 | 0.7026 | 0.4867 | 0.7865 | 0.064* | |
| C16 | 0.9506 (3) | 0.4637 (3) | 0.6721 (2) | 0.0419 (7) | |
| H16 | 1.0508 | 0.4406 | 0.6406 | 0.050* | |
| C17 | 0.7345 (3) | 0.7807 (3) | 0.53873 (19) | 0.0417 (7) | |
| H17 | 0.747 (3) | −0.006 (3) | 0.099 (2) | 0.067 (12)* |
| Fe1 | 0.0384 (3) | 0.0424 (4) | 0.0381 (4) | −0.0086 (3) | 0.0034 (2) | 0.0106 (3) |
| N1 | 0.0387 (13) | 0.0410 (14) | 0.0383 (13) | −0.0092 (11) | 0.0062 (10) | 0.0063 (11) |
| N2 | 0.0372 (13) | 0.0431 (14) | 0.0345 (13) | −0.0130 (11) | 0.0060 (10) | 0.0047 (11) |
| N3 | 0.0344 (13) | 0.0445 (14) | 0.0391 (13) | −0.0085 (11) | 0.0080 (10) | 0.0102 (11) |
| N4 | 0.0418 (15) | 0.073 (2) | 0.0584 (18) | 0.0057 (14) | 0.0150 (13) | 0.0275 (15) |
| N5 | 0.0464 (16) | 0.0499 (16) | 0.0545 (16) | −0.0076 (12) | 0.0044 (12) | 0.0220 (14) |
| C12 | 0.0473 (19) | 0.075 (2) | 0.058 (2) | −0.0233 (18) | 0.0052 (16) | 0.0173 (18) |
| N7 | 0.0404 (14) | 0.0469 (15) | 0.0407 (14) | −0.0173 (12) | −0.0005 (11) | 0.0076 (11) |
| N8 | 0.0379 (13) | 0.0464 (15) | 0.0485 (15) | −0.0129 (11) | 0.0044 (11) | 0.0104 (12) |
| N9 | 0.0362 (15) | 0.071 (2) | 0.0734 (19) | −0.0046 (13) | 0.0092 (13) | 0.0306 (16) |
| O1 | 0.0492 (14) | 0.0503 (14) | 0.0551 (14) | −0.0065 (11) | −0.0113 (11) | −0.0028 (11) |
| S1 | 0.0399 (4) | 0.0577 (5) | 0.0429 (5) | −0.0078 (4) | 0.0058 (3) | 0.0164 (4) |
| S2 | 0.0511 (5) | 0.0507 (5) | 0.0736 (6) | −0.0045 (4) | 0.0042 (4) | 0.0327 (4) |
| S3 | 0.0410 (4) | 0.0548 (5) | 0.0520 (5) | −0.0077 (4) | 0.0059 (4) | 0.0184 (4) |
| C1 | 0.0456 (17) | 0.0447 (17) | 0.0418 (17) | −0.0112 (14) | 0.0055 (13) | 0.0094 (14) |
| C2 | 0.0442 (17) | 0.0364 (16) | 0.0482 (18) | 0.0007 (13) | 0.0010 (14) | 0.0061 (14) |
| C3 | 0.0349 (15) | 0.0430 (17) | 0.0404 (16) | −0.0061 (13) | 0.0061 (12) | −0.0018 (13) |
| C4 | 0.0319 (14) | 0.0388 (15) | 0.0347 (15) | −0.0115 (12) | 0.0024 (11) | −0.0008 (12) |
| C5 | 0.0370 (15) | 0.0333 (15) | 0.0431 (16) | −0.0036 (12) | 0.0037 (12) | 0.0090 (13) |
| C6 | 0.0350 (15) | 0.0429 (17) | 0.0403 (16) | −0.0090 (13) | 0.0086 (12) | 0.0013 (13) |
| C7 | 0.0378 (16) | 0.0458 (17) | 0.0401 (16) | −0.0114 (13) | 0.0033 (13) | 0.0044 (13) |
| C8 | 0.0312 (14) | 0.0402 (17) | 0.0454 (17) | −0.0063 (12) | 0.0083 (12) | 0.0018 (14) |
| C9 | 0.066 (2) | 0.062 (2) | 0.059 (2) | −0.0292 (19) | −0.0024 (17) | −0.0029 (18) |
| C10 | 0.103 (3) | 0.092 (3) | 0.063 (3) | −0.054 (3) | 0.015 (2) | −0.007 (2) |
| C11 | 0.060 (2) | 0.064 (2) | 0.053 (2) | −0.0279 (18) | −0.0082 (17) | 0.0184 (17) |
| N6 | 0.0501 (16) | 0.0493 (16) | 0.0521 (16) | −0.0155 (13) | −0.0111 (13) | 0.0132 (13) |
| C13 | 0.0415 (17) | 0.0480 (18) | 0.0475 (18) | −0.0159 (14) | −0.0004 (13) | 0.0023 (14) |
| C14 | 0.0389 (16) | 0.0409 (17) | 0.0428 (16) | −0.0161 (13) | −0.0033 (13) | 0.0042 (13) |
| C15 | 0.0388 (17) | 0.056 (2) | 0.060 (2) | −0.0117 (15) | −0.0008 (15) | 0.0154 (16) |
| C16 | 0.0389 (16) | 0.0433 (17) | 0.0438 (17) | −0.0157 (14) | 0.0018 (13) | 0.0029 (13) |
| C17 | 0.0406 (16) | 0.0466 (17) | 0.0365 (16) | −0.0139 (13) | 0.0010 (13) | 0.0025 (13) |
| Fe1—N5i | 2.140 (3) | S1—C7 | 1.690 (3) |
| Fe1—N5 | 2.140 (3) | S2—C8 | 1.623 (3) |
| Fe1—O1i | 2.196 (2) | S3—C17 | 1.677 (3) |
| Fe1—O1 | 2.196 (2) | C1—C2 | 1.377 (4) |
| Fe1—N1 | 2.339 (2) | C1—H1 | 0.9500 |
| Fe1—N1i | 2.339 (2) | C2—C3 | 1.375 (4) |
| N1—C5 | 1.332 (3) | C2—H2 | 0.9500 |
| N1—C1 | 1.352 (4) | C3—C4 | 1.385 (4) |
| N2—C6 | 1.280 (4) | C3—H3A | 0.9500 |
| N2—N3 | 1.368 (3) | C4—C5 | 1.388 (4) |
| N3—C7 | 1.350 (4) | C4—C6 | 1.453 (4) |
| N3—H3 | 0.8800 | C5—H5 | 0.9500 |
| N4—C7 | 1.312 (4) | C6—H6 | 0.9500 |
| N4—H4A | 0.8800 | C9—C10 | 1.498 (5) |
| N4—H4B | 0.8800 | C9—H9C | 0.9900 |
| N5—C8 | 1.156 (4) | C9—H9D | 0.9900 |
| C12—C11 | 1.368 (5) | C10—H10A | 0.9800 |
| C12—C15 | 1.377 (4) | C10—H10B | 0.9800 |
| C12—H12 | 0.9500 | C10—H10C | 0.9800 |
| N7—C16 | 1.274 (4) | C11—N6 | 1.332 (4) |
| N7—N8 | 1.373 (3) | C11—H11 | 0.9500 |
| N8—C17 | 1.361 (4) | N6—C13 | 1.332 (4) |
| N8—H8 | 0.8800 | C13—C14 | 1.395 (4) |
| N9—C17 | 1.312 (4) | C13—H13 | 0.9500 |
| N9—H9A | 0.8800 | C14—C15 | 1.383 (4) |
| N9—H9B | 0.8800 | C14—C16 | 1.453 (4) |
| O1—C9 | 1.408 (4) | C15—H15 | 0.9500 |
| O1—H17 | 0.816 (10) | C16—H16 | 0.9500 |
| N5i—Fe1—N5 | 180.00 (14) | C2—C3—H3A | 120.2 |
| N5i—Fe1—O1i | 88.99 (10) | C4—C3—H3A | 120.2 |
| N5—Fe1—O1i | 91.01 (10) | C3—C4—C5 | 117.5 (2) |
| N5i—Fe1—O1 | 91.01 (10) | C3—C4—C6 | 120.6 (2) |
| N5—Fe1—O1 | 88.99 (10) | C5—C4—C6 | 121.9 (3) |
| O1i—Fe1—O1 | 180.00 (14) | N1—C5—C4 | 123.9 (3) |
| N5i—Fe1—N1 | 88.53 (9) | N1—C5—H5 | 118.0 |
| N5—Fe1—N1 | 91.47 (9) | C4—C5—H5 | 118.0 |
| O1i—Fe1—N1 | 85.58 (9) | N2—C6—C4 | 119.9 (2) |
| O1—Fe1—N1 | 94.42 (9) | N2—C6—H6 | 120.0 |
| N5i—Fe1—N1i | 91.47 (9) | C4—C6—H6 | 120.0 |
| N5—Fe1—N1i | 88.53 (9) | N4—C7—N3 | 116.9 (3) |
| O1i—Fe1—N1i | 94.42 (9) | N4—C7—S1 | 123.1 (2) |
| O1—Fe1—N1i | 85.58 (9) | N3—C7—S1 | 119.9 (2) |
| N1—Fe1—N1i | 180.00 (12) | N5—C8—S2 | 179.0 (3) |
| C5—N1—C1 | 117.4 (2) | O1—C9—C10 | 113.3 (3) |
| C5—N1—Fe1 | 120.69 (18) | O1—C9—H9C | 108.9 |
| C1—N1—Fe1 | 121.52 (18) | C10—C9—H9C | 108.9 |
| C6—N2—N3 | 116.9 (2) | O1—C9—H9D | 108.9 |
| C7—N3—N2 | 119.2 (2) | C10—C9—H9D | 108.9 |
| C7—N3—H3 | 120.4 | H9C—C9—H9D | 107.7 |
| N2—N3—H3 | 120.4 | C9—C10—H10A | 109.5 |
| C7—N4—H4A | 120.0 | C9—C10—H10B | 109.5 |
| C7—N4—H4B | 120.0 | H10A—C10—H10B | 109.5 |
| H4A—N4—H4B | 120.0 | C9—C10—H10C | 109.5 |
| C8—N5—Fe1 | 170.5 (3) | H10A—C10—H10C | 109.5 |
| C11—C12—C15 | 119.4 (3) | H10B—C10—H10C | 109.5 |
| C11—C12—H12 | 120.3 | N6—C11—C12 | 122.9 (3) |
| C15—C12—H12 | 120.3 | N6—C11—H11 | 118.5 |
| C16—N7—N8 | 117.2 (2) | C12—C11—H11 | 118.5 |
| C17—N8—N7 | 119.6 (2) | C11—N6—C13 | 117.4 (3) |
| C17—N8—H8 | 120.2 | N6—C13—C14 | 123.9 (3) |
| N7—N8—H8 | 120.2 | N6—C13—H13 | 118.1 |
| C17—N9—H9A | 120.0 | C14—C13—H13 | 118.1 |
| C17—N9—H9B | 120.0 | C15—C14—C13 | 117.1 (3) |
| H9A—N9—H9B | 120.0 | C15—C14—C16 | 122.6 (3) |
| C9—O1—Fe1 | 126.7 (2) | C13—C14—C16 | 120.3 (3) |
| C9—O1—H17 | 112 (3) | C12—C15—C14 | 119.2 (3) |
| Fe1—O1—H17 | 115 (3) | C12—C15—H15 | 120.4 |
| N1—C1—C2 | 122.6 (3) | C14—C15—H15 | 120.4 |
| N1—C1—H1 | 118.7 | N7—C16—C14 | 120.5 (3) |
| C2—C1—H1 | 118.7 | N7—C16—H16 | 119.7 |
| C3—C2—C1 | 119.1 (3) | C14—C16—H16 | 119.7 |
| C3—C2—H2 | 120.5 | N9—C17—N8 | 116.1 (3) |
| C1—C2—H2 | 120.5 | N9—C17—S3 | 123.4 (2) |
| C2—C3—C4 | 119.6 (3) | N8—C17—S3 | 120.5 (2) |
| H··· | ||||
| N9—H9B···S3ii | 0.88 | 2.67 | 3.533 (3) | 165 |
| N4—H4B···S1iii | 0.88 | 2.52 | 3.373 (3) | 164 |
| N4—H4A···S2 | 0.88 | 2.80 | 3.360 (3) | 123 |
| N3—H3···S3iv | 0.88 | 2.59 | 3.414 (3) | 156 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N9—H9 | 0.88 | 2.67 | 3.533 (3) | 165 |
| N4—H4 | 0.88 | 2.52 | 3.373 (3) | 164 |
| N4—H4 | 0.88 | 2.80 | 3.360 (3) | 123 |
| N3—H3⋯S3iii | 0.88 | 2.59 | 3.414 (3) | 156 |
Symmetry codes: (i) ; (ii) ; (iii) .