Literature DB >> 21583246

3-(10-Chloro-9-anthr-yl)-5-[3-(prop-2-yn-yloxy)phenoxy-meth-yl]isoxazole.

Juan Li, Hailing Xi, Jianming Zhang.   

Abstract

In the title mol-ecule, C(27)H(18)ClNO(3), the anthracene mean plane forms dihedral angles of 67.43 (2) and 15.75 (3)° with the isoxazole and benzene rings, respectively. In the crystal structure, C-H⋯π inter-actions link mol-ecules into centrosymmetric dimers, which are further linked by weak inter-molecular C-H⋯N hydrogen bonds into ribbons propagating in the [110] direction.

Entities:  

Year:  2009        PMID: 21583246      PMCID: PMC2969672          DOI: 10.1107/S1600536809019229

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the preparation of the title compound, see Han et al. (2003 ▶). For pharmaceutical applications of isoxazole and its derivatives, see: De Luca et al. (2001 ▶); Yamamoto et al. (2007 ▶); Reuman et al. (2008 ▶).

Experimental

Crystal data

C27H18ClNO3 M = 439.87 Triclinic, a = 8.4816 (3) Å b = 8.6450 (3) Å c = 16.8606 (6) Å α = 100.364 (1)° β = 103.596 (1)° γ = 94.965 (1)° V = 1171.25 (7) Å3 Z = 2 Mo Kα radiation μ = 0.19 mm−1 T = 292 K 0.30 × 0.20 × 0.10 mm

Data collection

Bruker SMART 4K CCD area-detector diffractometer Absorption correction: none 4812 measured reflections 4812 independent reflections 4227 reflections with I > 2σ(I) R int = 0.0000

Refinement

R[F 2 > 2σ(F 2)] = 0.057 wR(F 2) = 0.163 S = 1.06 4812 reflections 289 parameters H-atom parameters constrained Δρmax = 0.32 e Å−3 Δρmin = −0.39 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809019229/cv2557sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809019229/cv2557Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C27H18ClNO3Z = 2
Mr = 439.87F(000) = 456
Triclinic, P1Dx = 1.247 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.4816 (3) ÅCell parameters from 6384 reflections
b = 8.6450 (3) Åθ = 2.5–28.2°
c = 16.8606 (6) ŵ = 0.19 mm1
α = 100.364 (1)°T = 292 K
β = 103.596 (1)°Block, colourless
γ = 94.965 (1)°0.30 × 0.20 × 0.10 mm
V = 1171.25 (7) Å3
Bruker SMART 4K CCD area-detector diffractometer4227 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.0000
graphiteθmax = 26.5°, θmin = 2.4°
φ and ω scansh = −10→10
4812 measured reflectionsk = −10→10
4812 independent reflectionsl = 0→21
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.057Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.163H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0786P)2 + 0.2928P] where P = (Fo2 + 2Fc2)/3
4812 reflections(Δ/σ)max = 0.001
289 parametersΔρmax = 0.32 e Å3
0 restraintsΔρmin = −0.39 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.2863 (2)0.3620 (2)0.91382 (11)0.0372 (4)
C20.1335 (3)0.4195 (2)0.91474 (14)0.0487 (5)
H20.09160.41840.96090.058*
C30.0490 (3)0.4751 (3)0.85017 (16)0.0566 (5)
H3−0.04950.51280.85260.068*
C40.1087 (3)0.4767 (3)0.77859 (15)0.0534 (5)
H40.04870.51450.73410.064*
C50.2529 (2)0.4234 (2)0.77469 (12)0.0426 (4)
H50.28990.42440.72700.051*
C60.3493 (2)0.36581 (19)0.84180 (10)0.0338 (4)
C70.4989 (2)0.30988 (19)0.83910 (10)0.0318 (3)
C80.5881 (2)0.2499 (2)0.90563 (10)0.0335 (4)
C90.7423 (2)0.1965 (2)0.90562 (12)0.0430 (4)
H90.78560.20030.86010.052*
C100.8275 (3)0.1400 (3)0.97066 (14)0.0543 (5)
H100.92820.10630.96930.065*
C110.7643 (3)0.1322 (3)1.04012 (13)0.0580 (6)
H110.82290.09201.08400.070*
C120.6195 (3)0.1825 (3)1.04358 (11)0.0504 (5)
H120.58010.17671.09010.060*
C130.5254 (2)0.2444 (2)0.97749 (10)0.0369 (4)
C140.3769 (2)0.3003 (2)0.97840 (11)0.0393 (4)
C150.56449 (19)0.3098 (2)0.76469 (10)0.0313 (3)
C160.5831 (2)0.1769 (2)0.70657 (11)0.0372 (4)
H160.55630.07020.70630.045*
C170.6479 (2)0.2387 (2)0.65203 (10)0.0369 (4)
C180.7037 (2)0.1683 (3)0.57805 (11)0.0447 (4)
H18A0.81810.20710.58540.054*
H18B0.69180.05360.57050.054*
C190.6541 (2)0.1848 (2)0.43448 (11)0.0379 (4)
C200.7742 (2)0.0930 (2)0.42197 (11)0.0378 (4)
H200.82850.04570.46400.045*
C210.8133 (2)0.0720 (2)0.34504 (11)0.0356 (4)
C220.7331 (2)0.1422 (2)0.28241 (12)0.0428 (4)
H220.76010.12890.23150.051*
C230.6120 (2)0.2329 (2)0.29685 (12)0.0444 (4)
H230.55710.27990.25490.053*
C240.5710 (2)0.2549 (2)0.37219 (12)0.0429 (4)
H240.48910.31560.38100.051*
C250.9797 (3)−0.0505 (2)0.26169 (12)0.0444 (4)
H25A0.8811−0.07840.21630.053*
H25B1.0408−0.14030.25970.053*
C261.0785 (2)0.0859 (2)0.24940 (12)0.0447 (4)
C271.1606 (3)0.1948 (3)0.24028 (15)0.0581 (6)
H271.22550.28090.23310.070*
Cl10.29951 (8)0.29325 (7)1.06495 (3)0.0617 (2)
N10.6140 (2)0.44298 (18)0.74604 (9)0.0423 (4)
O10.66859 (17)0.39855 (16)0.67356 (8)0.0448 (3)
O20.60568 (17)0.2133 (2)0.50758 (8)0.0520 (4)
O30.93481 (17)−0.02142 (17)0.33887 (8)0.0473 (3)
U11U22U33U12U13U23
C10.0398 (9)0.0328 (8)0.0409 (9)0.0008 (7)0.0202 (7)0.0011 (7)
C20.0488 (11)0.0461 (11)0.0581 (12)0.0079 (8)0.0309 (9)0.0046 (9)
C30.0447 (11)0.0537 (12)0.0799 (15)0.0180 (9)0.0302 (11)0.0117 (11)
C40.0455 (11)0.0538 (12)0.0653 (13)0.0155 (9)0.0136 (10)0.0202 (10)
C50.0425 (10)0.0460 (10)0.0436 (10)0.0086 (8)0.0149 (8)0.0140 (8)
C60.0373 (8)0.0313 (8)0.0342 (8)0.0027 (6)0.0143 (7)0.0045 (6)
C70.0358 (8)0.0333 (8)0.0279 (8)0.0031 (6)0.0137 (6)0.0039 (6)
C80.0394 (8)0.0344 (8)0.0279 (8)0.0032 (7)0.0118 (7)0.0060 (6)
C90.0427 (10)0.0528 (11)0.0389 (9)0.0120 (8)0.0144 (8)0.0155 (8)
C100.0475 (11)0.0664 (13)0.0528 (12)0.0179 (10)0.0087 (9)0.0231 (10)
C110.0634 (13)0.0702 (14)0.0412 (11)0.0117 (11)0.0027 (10)0.0265 (10)
C120.0624 (13)0.0605 (12)0.0280 (9)0.0016 (10)0.0099 (8)0.0139 (8)
C130.0448 (9)0.0374 (9)0.0270 (8)−0.0022 (7)0.0111 (7)0.0044 (6)
C140.0503 (10)0.0390 (9)0.0302 (8)−0.0030 (7)0.0218 (7)0.0007 (7)
C150.0296 (7)0.0390 (9)0.0278 (8)0.0065 (6)0.0101 (6)0.0093 (6)
C160.0433 (9)0.0375 (9)0.0343 (9)0.0070 (7)0.0165 (7)0.0070 (7)
C170.0393 (9)0.0444 (10)0.0300 (8)0.0106 (7)0.0117 (7)0.0089 (7)
C180.0493 (10)0.0601 (12)0.0309 (9)0.0190 (9)0.0174 (8)0.0106 (8)
C190.0392 (9)0.0472 (10)0.0286 (8)0.0072 (7)0.0124 (7)0.0051 (7)
C200.0406 (9)0.0464 (10)0.0302 (8)0.0099 (7)0.0109 (7)0.0131 (7)
C210.0376 (9)0.0397 (9)0.0333 (8)0.0067 (7)0.0143 (7)0.0097 (7)
C220.0448 (10)0.0568 (11)0.0339 (9)0.0111 (8)0.0163 (7)0.0175 (8)
C230.0453 (10)0.0555 (11)0.0389 (9)0.0154 (8)0.0110 (8)0.0217 (8)
C240.0405 (9)0.0523 (11)0.0391 (9)0.0161 (8)0.0117 (8)0.0110 (8)
C250.0513 (10)0.0448 (10)0.0430 (10)0.0123 (8)0.0252 (8)0.0039 (8)
C260.0413 (9)0.0553 (11)0.0408 (10)0.0135 (8)0.0154 (8)0.0089 (8)
C270.0500 (11)0.0662 (14)0.0636 (14)0.0066 (10)0.0203 (10)0.0206 (11)
Cl10.0751 (4)0.0780 (4)0.0412 (3)0.0068 (3)0.0364 (3)0.0093 (2)
N10.0581 (9)0.0403 (8)0.0368 (8)0.0081 (7)0.0263 (7)0.0101 (6)
O10.0603 (8)0.0456 (7)0.0381 (7)0.0079 (6)0.0277 (6)0.0131 (5)
O20.0505 (8)0.0849 (10)0.0285 (6)0.0301 (7)0.0174 (6)0.0122 (6)
O30.0562 (8)0.0576 (8)0.0425 (7)0.0274 (6)0.0266 (6)0.0192 (6)
C1—C141.395 (3)C15—C161.416 (2)
C1—C21.430 (3)C16—C171.340 (2)
C1—C61.441 (2)C16—H160.9300
C2—C31.345 (3)C17—O11.349 (2)
C2—H20.9300C17—C181.485 (2)
C3—C41.416 (3)C18—O21.418 (2)
C3—H30.9300C18—H18A0.9700
C4—C51.355 (3)C18—H18B0.9700
C4—H40.9300C19—C201.376 (3)
C5—C61.427 (2)C19—O21.377 (2)
C5—H50.9300C19—C241.386 (3)
C6—C71.404 (2)C20—C211.398 (2)
C7—C81.406 (2)C20—H200.9300
C7—C151.487 (2)C21—O31.374 (2)
C8—C91.424 (3)C21—C221.382 (2)
C8—C131.440 (2)C22—C231.385 (3)
C9—C101.358 (3)C22—H220.9300
C9—H90.9300C23—C241.379 (3)
C10—C111.407 (3)C23—H230.9300
C10—H100.9300C24—H240.9300
C11—C121.348 (3)C25—O31.426 (2)
C11—H110.9300C25—C261.461 (3)
C12—C131.427 (3)C25—H25A0.9700
C12—H120.9300C25—H25B0.9700
C13—C141.390 (3)C26—C271.176 (3)
C14—Cl11.7434 (17)C27—H270.9300
C15—N11.308 (2)N1—O11.4082 (19)
C14—C1—C2123.58 (17)C16—C15—C7127.76 (15)
C14—C1—C6118.09 (16)C17—C16—C15104.87 (16)
C2—C1—C6118.33 (17)C17—C16—H16127.6
C3—C2—C1121.36 (19)C15—C16—H16127.6
C3—C2—H2119.3C16—C17—O1109.76 (16)
C1—C2—H2119.3C16—C17—C18133.60 (18)
C2—C3—C4120.68 (19)O1—C17—C18116.60 (16)
C2—C3—H3119.7O2—C18—C17107.63 (15)
C4—C3—H3119.7O2—C18—H18A110.2
C5—C4—C3120.19 (19)C17—C18—H18A110.2
C5—C4—H4119.9O2—C18—H18B110.2
C3—C4—H4119.9C17—C18—H18B110.2
C4—C5—C6121.70 (18)H18A—C18—H18B108.5
C4—C5—H5119.1C20—C19—O2123.81 (16)
C6—C5—H5119.1C20—C19—C24121.26 (16)
C7—C6—C5122.69 (16)O2—C19—C24114.93 (16)
C7—C6—C1119.58 (15)C19—C20—C21118.90 (16)
C5—C6—C1117.71 (16)C19—C20—H20120.6
C6—C7—C8120.95 (15)C21—C20—H20120.6
C6—C7—C15120.45 (14)O3—C21—C22124.87 (16)
C8—C7—C15118.59 (15)O3—C21—C20114.38 (15)
C7—C8—C9122.18 (15)C22—C21—C20120.76 (17)
C7—C8—C13119.87 (16)C21—C22—C23118.85 (17)
C9—C8—C13117.94 (15)C21—C22—H22120.6
C10—C9—C8121.44 (18)C23—C22—H22120.6
C10—C9—H9119.3C24—C23—C22121.41 (16)
C8—C9—H9119.3C24—C23—H23119.3
C9—C10—C11120.4 (2)C22—C23—H23119.3
C9—C10—H10119.8C23—C24—C19118.82 (17)
C11—C10—H10119.8C23—C24—H24120.6
C12—C11—C10120.54 (18)C19—C24—H24120.6
C12—C11—H11119.7O3—C25—C26112.99 (15)
C10—C11—H11119.7O3—C25—H25A109.0
C11—C12—C13121.53 (18)C26—C25—H25A109.0
C11—C12—H12119.2O3—C25—H25B109.0
C13—C12—H12119.2C26—C25—H25B109.0
C14—C13—C12123.94 (17)H25A—C25—H25B107.8
C14—C13—C8117.93 (16)C27—C26—C25178.8 (2)
C12—C13—C8118.13 (18)C26—C27—H27180.0
C13—C14—C1123.58 (16)C15—N1—O1105.45 (14)
C13—C14—Cl1118.27 (14)C17—O1—N1108.51 (13)
C1—C14—Cl1118.15 (15)C19—O2—C18117.55 (14)
N1—C15—C16111.40 (15)C21—O3—C25117.66 (14)
N1—C15—C7120.84 (15)
D—H···AD—HH···AD···AD—H···A
C27—H27···N1i0.932.573.465 (3)163
C16—H16···Cgii0.932.673.431 (2)140
Table 1

Hydrogen-bond geometry (Å, °)

Cg is the centroid of the C19–C24 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
C27—H27⋯N1i0.932.573.465 (3)163
C16—H16⋯Cgii0.932.673.431 (2)140

Symmetry codes: (i) ; (ii) .

  5 in total

1.  Solid-phase synthesis of isoxazole-based amino acids: a new scaffold for molecular diversity.

Authors:  L De Luca; G Giacomelli; A Riu
Journal:  J Org Chem       Date:  2001-10-05       Impact factor: 4.354

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Scalable synthesis of the VEGF-R2 kinase inhibitor JNJ-17029259 using ultrasound-mediated addition of MeLi-CeCl3 to a nitrile.

Authors:  Michael Reuman; Sandra Beish; Jeremy Davis; Mark J Batchelor; Martin C Hutchings; David F C Moffat; Peter J Connolly; Ronald K Russell
Journal:  J Org Chem       Date:  2008-01-03       Impact factor: 4.354

4.  Synthesis and evaluation of isoxazole derivatives as lysophosphatidic acid (LPA) antagonists.

Authors:  Takashi Yamamoto; Koichi Fujita; Sayaka Asari; Akira Chiba; Yuka Kataba; Koji Ohsumi; Naoko Ohmuta; Yuko Iida; Chiori Ijichi; Satoshi Iwayama; Naoyuki Fukuchi; Masataka Shoji
Journal:  Bioorg Med Chem Lett       Date:  2007-04-10       Impact factor: 2.823

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total

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