Literature DB >> 21583166

Bis(2-hydroxy-benzaldehyde oxime) O,O'-butane-1,4-diyldicarbonyl ether.

Bijan Etemadi, Reza Kia, Hashem Sharghi, Mona Hosseini Sarvari.   

Abstract

The mol-ecule of the title compound, C(20)H(20)N(2)O(6), lies across a crystallographic inversion centre, the asymmetric unit comprising one half-mol-ecule. An intra-molecular O-H⋯N hydrogen bond generates a six-membered ring, producing an S(6) ring motif. Pairs of inter-molecular C-H⋯O hydrogen bonds link neighbouring mol-ecules into a layer with R(2) (2)(38) ring motif. The crystal structure is further stabilized by the inter-molecular C-H⋯π inter-actions.

Entities:  

Year:  2009        PMID: 21583166      PMCID: PMC2969837          DOI: 10.1107/S1600536809016663

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For bond-length data, see Allen et al. (1987 ▶). For hydrogen bond motifs, see Bernstein et al. (1995 ▶). For Schiff bases, see: Granovski et al., (1993 ▶). For the synthesis, see: Hosseini Sarvari (2003 ▶).

Experimental

Crystal data

C20H20N2O6 M = 384.38 Monoclinic, a = 13.0293 (11) Å b = 5.5464 (4) Å c = 25.538 (2) Å β = 91.348 (7)° V = 1845.0 (3) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 120 K 0.45 × 0.11 × 0.10 mm

Data collection

STOE IPDSII diffractometer Absorption correction: numerical (X-RED32; Stoe & Cie (2005 ▶) T min = 0.956, T max = 0.985 10357 measured reflections 2493 independent reflections 2098 reflections with I > 2σ(I) R int = 0.046

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.099 S = 1.10 2493 reflections 135 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.31 e Å−3 Δρmin = −0.20 e Å−3 Data collection: X-AREA (Stoe & Cie, 2005 ▶); cell refinement: X-AREA; data reduction: X-AREA; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809016663/at2778sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809016663/at2778Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H20N2O6F(000) = 808
Mr = 384.38Dx = 1.384 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 1302 reflections
a = 13.0293 (11) Åθ = 3.1–29.2°
b = 5.5464 (4) ŵ = 0.10 mm1
c = 25.538 (2) ÅT = 120 K
β = 91.348 (7)°Needle, colourless
V = 1845.0 (3) Å30.45 × 0.11 × 0.10 mm
Z = 4
STOE IPDS II diffractometer2493 independent reflections
Radiation source: fine-focus sealed tube2098 reflections with I > 2σ(I)
graphiteRint = 0.091
Detector resolution: 0.15 pixels mm-1θmax = 29.2°, θmin = 3.1°
rotation method scansh = −17→17
Absorption correction: numerical (X-RED32; Stoe & Cie (2005)k = −7→7
Tmin = 0.956, Tmax = 0.985l = −35→34
41515 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.099H atoms treated by a mixture of independent and constrained refinement
S = 1.10w = 1/[σ2(Fo2) + (0.0425P)2 + 1.8216P] where P = (Fo2 + 2Fc2)/3
2493 reflections(Δ/σ)max = 0.004
135 parametersΔρmax = 0.31 e Å3
0 restraintsΔρmin = −0.20 e Å3
Experimental. The low-temperature data was collected with the Oxford Cyrosystem Cobra low-temperature attachment.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.79600 (9)−0.3740 (2)0.32698 (5)0.0186 (3)
C20.73433 (10)−0.5276 (2)0.29667 (5)0.0204 (3)
H20.7620−0.66770.28280.025*
C30.63188 (10)−0.4721 (2)0.28720 (5)0.0206 (3)
H30.5909−0.57680.26740.025*
C40.58953 (9)−0.2610 (3)0.30699 (5)0.0212 (3)
H40.5207−0.22450.30040.025*
C50.65095 (9)−0.1061 (2)0.33650 (5)0.0192 (3)
H50.62300.03550.34950.023*
C60.75482 (9)−0.1590 (2)0.34720 (5)0.0168 (2)
C70.81678 (10)0.0064 (2)0.37953 (5)0.0193 (3)
H70.7866 (13)0.154 (3)0.3912 (7)0.027 (4)*
C81.05836 (10)0.0434 (2)0.43627 (5)0.0204 (3)
C91.11260 (10)0.2321 (2)0.46898 (5)0.0208 (3)
H9A1.07410.26170.50040.025*
H9B1.11550.38160.44940.025*
C101.22133 (10)0.1530 (2)0.48435 (5)0.0206 (3)
H10B1.25880.11670.45290.025*
H10A1.21810.00690.50510.025*
N10.90918 (8)−0.0542 (2)0.39115 (4)0.0224 (3)
O10.89508 (7)−0.4424 (2)0.33553 (4)0.0289 (3)
H10.9268 (18)−0.333 (5)0.3572 (10)0.062 (7)*
O20.96033 (7)0.11970 (18)0.42331 (4)0.0223 (2)
O31.09270 (8)−0.14750 (19)0.42343 (4)0.0271 (2)
U11U22U33U12U13U23
C10.0151 (5)0.0196 (6)0.0210 (6)0.0028 (4)−0.0008 (4)0.0010 (5)
C20.0222 (6)0.0177 (6)0.0213 (6)0.0026 (5)0.0002 (5)−0.0012 (5)
C30.0191 (6)0.0219 (6)0.0207 (6)−0.0031 (5)−0.0022 (4)−0.0009 (5)
C40.0146 (5)0.0261 (7)0.0227 (6)0.0016 (5)−0.0013 (4)−0.0001 (5)
C50.0172 (6)0.0199 (6)0.0204 (6)0.0031 (5)0.0011 (4)−0.0008 (5)
C60.0163 (5)0.0171 (6)0.0170 (5)−0.0003 (4)−0.0008 (4)0.0010 (5)
C70.0202 (6)0.0185 (6)0.0191 (6)−0.0007 (5)−0.0006 (4)−0.0001 (5)
C80.0194 (6)0.0224 (7)0.0192 (6)−0.0037 (5)−0.0019 (4)0.0009 (5)
C90.0209 (6)0.0207 (6)0.0206 (6)−0.0033 (5)−0.0025 (5)−0.0011 (5)
C100.0204 (6)0.0216 (6)0.0197 (6)−0.0032 (5)−0.0035 (5)−0.0012 (5)
N10.0197 (5)0.0231 (6)0.0241 (6)−0.0047 (4)−0.0043 (4)−0.0052 (5)
O10.0170 (5)0.0292 (6)0.0402 (6)0.0085 (4)−0.0070 (4)−0.0111 (5)
O20.0199 (5)0.0217 (5)0.0250 (5)−0.0030 (4)−0.0048 (4)−0.0048 (4)
O30.0250 (5)0.0231 (5)0.0330 (5)0.0006 (4)−0.0067 (4)−0.0060 (4)
C1—O11.3583 (15)C7—H70.958 (18)
C1—C21.3935 (18)C8—O31.1985 (17)
C1—C61.4105 (18)C8—O21.3784 (16)
C2—C31.3857 (17)C8—C91.5047 (18)
C2—H20.9300C9—C101.5255 (18)
C3—C41.3943 (19)C9—H9A0.9700
C3—H30.9300C9—H9B0.9700
C4—C51.3850 (18)C10—C10i1.526 (2)
C4—H40.9300C10—H10B0.9700
C5—C61.4054 (17)C10—H10A0.9700
C5—H50.9300N1—O21.4226 (14)
C6—C71.4639 (17)O1—H10.91 (3)
C7—N11.2782 (17)
O1—C1—C2116.85 (12)C6—C7—H7119.1 (10)
O1—C1—C6123.07 (12)O3—C8—O2123.73 (12)
C2—C1—C6120.08 (11)O3—C8—C9126.36 (12)
C3—C2—C1120.10 (12)O2—C8—C9109.91 (11)
C3—C2—H2120.0C8—C9—C10111.35 (11)
C1—C2—H2120.0C8—C9—H9A109.4
C2—C3—C4120.75 (12)C10—C9—H9A109.4
C2—C3—H3119.6C8—C9—H9B109.4
C4—C3—H3119.6C10—C9—H9B109.4
C5—C4—C3119.31 (11)H9A—C9—H9B108.0
C5—C4—H4120.3C9—C10—C10i111.85 (14)
C3—C4—H4120.3C9—C10—H10B109.2
C4—C5—C6121.19 (12)C10i—C10—H10B109.2
C4—C5—H5119.4C9—C10—H10A109.2
C6—C5—H5119.4C10i—C10—H10A109.2
C5—C6—C1118.56 (11)H10B—C10—H10A107.9
C5—C6—C7119.65 (12)C7—N1—O2112.42 (11)
C1—C6—C7121.79 (11)C1—O1—H1109.0 (15)
N1—C7—C6118.03 (12)C8—O2—N1110.45 (10)
N1—C7—H7122.9 (10)
O1—C1—C2—C3178.68 (12)C2—C1—C6—C7179.53 (12)
C6—C1—C2—C3−1.30 (19)C5—C6—C7—N1175.82 (12)
C1—C2—C3—C41.0 (2)C1—C6—C7—N1−3.07 (19)
C2—C3—C4—C5−0.1 (2)O3—C8—C9—C100.66 (19)
C3—C4—C5—C6−0.6 (2)O2—C8—C9—C10179.67 (10)
C4—C5—C6—C10.30 (19)C8—C9—C10—C10i177.66 (13)
C4—C5—C6—C7−178.63 (12)C6—C7—N1—O2−179.06 (10)
O1—C1—C6—C5−179.35 (12)O3—C8—O2—N1−2.57 (18)
C2—C1—C6—C50.63 (18)C9—C8—O2—N1178.39 (10)
O1—C1—C6—C7−0.4 (2)C7—N1—O2—C8178.03 (11)
D—H···AD—HH···AD···AD—H···A
O1—H1···N10.91 (3)1.79 (3)2.5836 (15)144 (2)
C4—H4···O1ii0.932.453.1874 (17)136
C2—H2···Cg1iii0.932.753.4659 (14)134
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯N10.91 (3)1.79 (3)2.5836 (15)144 (2)
C4—H4⋯O1i0.932.453.1874 (17)136
C2—H2⋯Cg1ii0.932.753.4659 (14)134

Symmetry codes: (i) ; (ii) . Cg1 is the centroid of the C1–C6 benzene ring.

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