| Literature DB >> 21583166 |
Bijan Etemadi, Reza Kia, Hashem Sharghi, Mona Hosseini Sarvari.
Abstract
The mol-ecule of the title compound, C(20)H(20)N(2)O(6), lies across a crystallographic inversion centre, the asymmetric unit comprising one half-mol-ecule. An intra-molecular O-H⋯N hydrogen bond generates a six-membered ring, producing an S(6) ring motif. Pairs of inter-molecular C-H⋯O hydrogen bonds link neighbouring mol-ecules into a layer with R(2) (2)(38) ring motif. The crystal structure is further stabilized by the inter-molecular C-H⋯π inter-actions.Entities:
Year: 2009 PMID: 21583166 PMCID: PMC2969837 DOI: 10.1107/S1600536809016663
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H20N2O6 | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 1302 reflections |
| θ = 3.1–29.2° | |
| µ = 0.10 mm−1 | |
| β = 91.348 (7)° | Needle, colourless |
| 0.45 × 0.11 × 0.10 mm | |
| STOE IPDS II diffractometer | 2493 independent reflections |
| Radiation source: fine-focus sealed tube | 2098 reflections with |
| graphite | |
| Detector resolution: 0.15 pixels mm-1 | θmax = 29.2°, θmin = 3.1° |
| rotation method scans | |
| Absorption correction: numerical ( | |
| 41515 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2493 reflections | (Δ/σ)max = 0.004 |
| 135 parameters | Δρmax = 0.31 e Å−3 |
| 0 restraints | Δρmin = −0.20 e Å−3 |
| Experimental. The low-temperature data was collected with the Oxford Cyrosystem Cobra low-temperature attachment. |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| C1 | 0.79600 (9) | −0.3740 (2) | 0.32698 (5) | 0.0186 (3) | |
| C2 | 0.73433 (10) | −0.5276 (2) | 0.29667 (5) | 0.0204 (3) | |
| H2 | 0.7620 | −0.6677 | 0.2828 | 0.025* | |
| C3 | 0.63188 (10) | −0.4721 (2) | 0.28720 (5) | 0.0206 (3) | |
| H3 | 0.5909 | −0.5768 | 0.2674 | 0.025* | |
| C4 | 0.58953 (9) | −0.2610 (3) | 0.30699 (5) | 0.0212 (3) | |
| H4 | 0.5207 | −0.2245 | 0.3004 | 0.025* | |
| C5 | 0.65095 (9) | −0.1061 (2) | 0.33650 (5) | 0.0192 (3) | |
| H5 | 0.6230 | 0.0355 | 0.3495 | 0.023* | |
| C6 | 0.75482 (9) | −0.1590 (2) | 0.34720 (5) | 0.0168 (2) | |
| C7 | 0.81678 (10) | 0.0064 (2) | 0.37953 (5) | 0.0193 (3) | |
| H7 | 0.7866 (13) | 0.154 (3) | 0.3912 (7) | 0.027 (4)* | |
| C8 | 1.05836 (10) | 0.0434 (2) | 0.43627 (5) | 0.0204 (3) | |
| C9 | 1.11260 (10) | 0.2321 (2) | 0.46898 (5) | 0.0208 (3) | |
| H9A | 1.0741 | 0.2617 | 0.5004 | 0.025* | |
| H9B | 1.1155 | 0.3816 | 0.4494 | 0.025* | |
| C10 | 1.22133 (10) | 0.1530 (2) | 0.48435 (5) | 0.0206 (3) | |
| H10B | 1.2588 | 0.1167 | 0.4529 | 0.025* | |
| H10A | 1.2181 | 0.0069 | 0.5051 | 0.025* | |
| N1 | 0.90918 (8) | −0.0542 (2) | 0.39115 (4) | 0.0224 (3) | |
| O1 | 0.89508 (7) | −0.4424 (2) | 0.33553 (4) | 0.0289 (3) | |
| H1 | 0.9268 (18) | −0.333 (5) | 0.3572 (10) | 0.062 (7)* | |
| O2 | 0.96033 (7) | 0.11970 (18) | 0.42331 (4) | 0.0223 (2) | |
| O3 | 1.09270 (8) | −0.14750 (19) | 0.42343 (4) | 0.0271 (2) |
| C1 | 0.0151 (5) | 0.0196 (6) | 0.0210 (6) | 0.0028 (4) | −0.0008 (4) | 0.0010 (5) |
| C2 | 0.0222 (6) | 0.0177 (6) | 0.0213 (6) | 0.0026 (5) | 0.0002 (5) | −0.0012 (5) |
| C3 | 0.0191 (6) | 0.0219 (6) | 0.0207 (6) | −0.0031 (5) | −0.0022 (4) | −0.0009 (5) |
| C4 | 0.0146 (5) | 0.0261 (7) | 0.0227 (6) | 0.0016 (5) | −0.0013 (4) | −0.0001 (5) |
| C5 | 0.0172 (6) | 0.0199 (6) | 0.0204 (6) | 0.0031 (5) | 0.0011 (4) | −0.0008 (5) |
| C6 | 0.0163 (5) | 0.0171 (6) | 0.0170 (5) | −0.0003 (4) | −0.0008 (4) | 0.0010 (5) |
| C7 | 0.0202 (6) | 0.0185 (6) | 0.0191 (6) | −0.0007 (5) | −0.0006 (4) | −0.0001 (5) |
| C8 | 0.0194 (6) | 0.0224 (7) | 0.0192 (6) | −0.0037 (5) | −0.0019 (4) | 0.0009 (5) |
| C9 | 0.0209 (6) | 0.0207 (6) | 0.0206 (6) | −0.0033 (5) | −0.0025 (5) | −0.0011 (5) |
| C10 | 0.0204 (6) | 0.0216 (6) | 0.0197 (6) | −0.0032 (5) | −0.0035 (5) | −0.0012 (5) |
| N1 | 0.0197 (5) | 0.0231 (6) | 0.0241 (6) | −0.0047 (4) | −0.0043 (4) | −0.0052 (5) |
| O1 | 0.0170 (5) | 0.0292 (6) | 0.0402 (6) | 0.0085 (4) | −0.0070 (4) | −0.0111 (5) |
| O2 | 0.0199 (5) | 0.0217 (5) | 0.0250 (5) | −0.0030 (4) | −0.0048 (4) | −0.0048 (4) |
| O3 | 0.0250 (5) | 0.0231 (5) | 0.0330 (5) | 0.0006 (4) | −0.0067 (4) | −0.0060 (4) |
| C1—O1 | 1.3583 (15) | C7—H7 | 0.958 (18) |
| C1—C2 | 1.3935 (18) | C8—O3 | 1.1985 (17) |
| C1—C6 | 1.4105 (18) | C8—O2 | 1.3784 (16) |
| C2—C3 | 1.3857 (17) | C8—C9 | 1.5047 (18) |
| C2—H2 | 0.9300 | C9—C10 | 1.5255 (18) |
| C3—C4 | 1.3943 (19) | C9—H9A | 0.9700 |
| C3—H3 | 0.9300 | C9—H9B | 0.9700 |
| C4—C5 | 1.3850 (18) | C10—C10i | 1.526 (2) |
| C4—H4 | 0.9300 | C10—H10B | 0.9700 |
| C5—C6 | 1.4054 (17) | C10—H10A | 0.9700 |
| C5—H5 | 0.9300 | N1—O2 | 1.4226 (14) |
| C6—C7 | 1.4639 (17) | O1—H1 | 0.91 (3) |
| C7—N1 | 1.2782 (17) | ||
| O1—C1—C2 | 116.85 (12) | C6—C7—H7 | 119.1 (10) |
| O1—C1—C6 | 123.07 (12) | O3—C8—O2 | 123.73 (12) |
| C2—C1—C6 | 120.08 (11) | O3—C8—C9 | 126.36 (12) |
| C3—C2—C1 | 120.10 (12) | O2—C8—C9 | 109.91 (11) |
| C3—C2—H2 | 120.0 | C8—C9—C10 | 111.35 (11) |
| C1—C2—H2 | 120.0 | C8—C9—H9A | 109.4 |
| C2—C3—C4 | 120.75 (12) | C10—C9—H9A | 109.4 |
| C2—C3—H3 | 119.6 | C8—C9—H9B | 109.4 |
| C4—C3—H3 | 119.6 | C10—C9—H9B | 109.4 |
| C5—C4—C3 | 119.31 (11) | H9A—C9—H9B | 108.0 |
| C5—C4—H4 | 120.3 | C9—C10—C10i | 111.85 (14) |
| C3—C4—H4 | 120.3 | C9—C10—H10B | 109.2 |
| C4—C5—C6 | 121.19 (12) | C10i—C10—H10B | 109.2 |
| C4—C5—H5 | 119.4 | C9—C10—H10A | 109.2 |
| C6—C5—H5 | 119.4 | C10i—C10—H10A | 109.2 |
| C5—C6—C1 | 118.56 (11) | H10B—C10—H10A | 107.9 |
| C5—C6—C7 | 119.65 (12) | C7—N1—O2 | 112.42 (11) |
| C1—C6—C7 | 121.79 (11) | C1—O1—H1 | 109.0 (15) |
| N1—C7—C6 | 118.03 (12) | C8—O2—N1 | 110.45 (10) |
| N1—C7—H7 | 122.9 (10) | ||
| O1—C1—C2—C3 | 178.68 (12) | C2—C1—C6—C7 | 179.53 (12) |
| C6—C1—C2—C3 | −1.30 (19) | C5—C6—C7—N1 | 175.82 (12) |
| C1—C2—C3—C4 | 1.0 (2) | C1—C6—C7—N1 | −3.07 (19) |
| C2—C3—C4—C5 | −0.1 (2) | O3—C8—C9—C10 | 0.66 (19) |
| C3—C4—C5—C6 | −0.6 (2) | O2—C8—C9—C10 | 179.67 (10) |
| C4—C5—C6—C1 | 0.30 (19) | C8—C9—C10—C10i | 177.66 (13) |
| C4—C5—C6—C7 | −178.63 (12) | C6—C7—N1—O2 | −179.06 (10) |
| O1—C1—C6—C5 | −179.35 (12) | O3—C8—O2—N1 | −2.57 (18) |
| C2—C1—C6—C5 | 0.63 (18) | C9—C8—O2—N1 | 178.39 (10) |
| O1—C1—C6—C7 | −0.4 (2) | C7—N1—O2—C8 | 178.03 (11) |
| H··· | ||||
| O1—H1···N1 | 0.91 (3) | 1.79 (3) | 2.5836 (15) | 144 (2) |
| C4—H4···O1ii | 0.93 | 2.45 | 3.1874 (17) | 136 |
| C2—H2···Cg1iii | 0.93 | 2.75 | 3.4659 (14) | 134 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1⋯N1 | 0.91 (3) | 1.79 (3) | 2.5836 (15) | 144 (2) |
| C4—H4⋯O1i | 0.93 | 2.45 | 3.1874 (17) | 136 |
| C2—H2⋯ | 0.93 | 2.75 | 3.4659 (14) | 134 |
Symmetry codes: (i) ; (ii) . Cg1 is the centroid of the C1–C6 benzene ring.