Literature DB >> 21583159

(E)-3-[4-(Hex-yloxy)phen-yl]-1-(2-hydroxy-phen-yl)prop-2-en-1-one.

Zainab Ngaini, Siti Muhaini Haris Fadzillah, Hasnain Hussain, Ibrahim Abdul Razak, Hoong-Kun Fun.   

Abstract

In the title compound, C(21)H(24)O(3), the conformation of the enone group is s-cis. The benzene rings are inclined at an angle of 7.9 (1)°. The alk-oxy tail is planar, with a maximum deviation from the least-squares plane of 0.009 (2) Å, and adopts a trans conformation throughout. An intra-molecular O-H⋯O inter-action between the keto and hydr-oxy groups forms S(6) ring motifs. In the crystal, mol-ecules are arranged in a head-to-tail manner down the a axis and are subsequently stacked along the b axis, forming mol-ecular sheets parallel to the ab plane. The crystal structure is further stabilized by weak C-H⋯π inter-actions and short C⋯O [3.376 (2) Å] contacts.

Entities:  

Year:  2009        PMID: 21583159      PMCID: PMC2969631          DOI: 10.1107/S1600536809017577

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological properties of chalcone derivatives, see: Bhat et al. (2005 ▶); Xue et al. (2004 ▶); Zhao et al. (2005 ▶); Lee et al. (2006 ▶). For related structures, see: Razak, Fun, Ngaini, Rahman & Hussain (2009 ▶); Razak, Fun, Ngaini, Fadzillah & Hussain (2009a ▶,b ▶); Ngaini, Fadzillah et al. (2009 ▶); Ngaini, Rahman et al. (2009 ▶). For details of hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C21H24O3 M = 324.40 Monoclinic, a = 19.6443 (5) Å b = 7.1966 (2) Å c = 12.6520 (3) Å β = 106.438 (2)° V = 1715.53 (8) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 100 K 0.47 × 0.12 × 0.04 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.962, T max = 0.997 20873 measured reflections 5025 independent reflections 2783 reflections with I > 2σ(I) R int = 0.057

Refinement

R[F 2 > 2σ(F 2)] = 0.070 wR(F 2) = 0.190 S = 1.05 5025 reflections 222 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.53 e Å−3 Δρmin = −0.29 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809017577/sj2623sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809017577/sj2623Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H24O3F(000) = 696
Mr = 324.40Dx = 1.256 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3217 reflections
a = 19.6443 (5) Åθ = 3.0–30.0°
b = 7.1966 (2) ŵ = 0.08 mm1
c = 12.6520 (3) ÅT = 100 K
β = 106.438 (2)°Needle, yellow
V = 1715.53 (8) Å30.47 × 0.12 × 0.04 mm
Z = 4
Bruker SMART APEXII CCD area-detector diffractometer5025 independent reflections
Radiation source: sealed tube2783 reflections with I > 2σ(I)
graphiteRint = 0.057
φ and ω scansθmax = 30.1°, θmin = 1.1°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −27→27
Tmin = 0.962, Tmax = 0.997k = −9→10
20873 measured reflectionsl = −17→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.070Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.190H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.0907P)2] where P = (Fo2 + 2Fc2)/3
5025 reflections(Δ/σ)max < 0.001
222 parametersΔρmax = 0.53 e Å3
0 restraintsΔρmin = −0.29 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.31582 (7)0.61343 (19)−0.09249 (11)0.0210 (3)
O20.20488 (6)0.60487 (18)−0.03200 (11)0.0203 (3)
O3−0.06969 (6)0.61140 (17)0.36275 (11)0.0168 (3)
C10.35907 (9)0.6404 (2)0.20871 (16)0.0159 (4)
H1A0.33710.64620.26480.019*
C20.43212 (9)0.6445 (3)0.23554 (17)0.0202 (4)
H2A0.45900.65120.30890.024*
C30.46535 (9)0.6386 (3)0.15149 (16)0.0194 (4)
H3A0.51460.64150.16910.023*
C40.42582 (9)0.6283 (3)0.04267 (16)0.0175 (4)
H4A0.44850.6249−0.01260.021*
C50.35182 (9)0.6230 (2)0.01518 (15)0.0149 (4)
C60.31698 (9)0.6276 (2)0.09933 (15)0.0137 (4)
C70.23827 (9)0.6181 (2)0.06736 (15)0.0138 (4)
C80.19935 (9)0.6221 (2)0.15096 (16)0.0146 (4)
H8A0.22360.62500.22560.018*
C90.12783 (9)0.6216 (2)0.11734 (16)0.0153 (4)
H9A0.10760.62150.04140.018*
C100.07792 (8)0.6213 (2)0.18274 (15)0.0130 (4)
C110.00511 (9)0.6329 (2)0.12710 (16)0.0154 (4)
H11A−0.00910.64380.05070.018*
C12−0.04606 (9)0.6284 (3)0.18360 (16)0.0160 (4)
H12A−0.09400.63440.14540.019*
C13−0.02488 (9)0.6148 (2)0.29733 (16)0.0135 (4)
C140.04731 (9)0.6028 (2)0.35469 (16)0.0156 (4)
H14A0.06120.59250.43110.019*
C150.09760 (9)0.6064 (2)0.29794 (16)0.0154 (4)
H15A0.14540.59880.33660.019*
C16−0.14479 (8)0.6211 (3)0.31008 (15)0.0153 (4)
H16A−0.16020.51480.26210.018*
H16B−0.15650.73350.26640.018*
C17−0.18025 (9)0.6212 (3)0.40186 (15)0.0151 (4)
H17A−0.16310.72690.44960.018*
H17B−0.16670.50940.44550.018*
C18−0.26094 (9)0.6306 (3)0.36018 (15)0.0149 (4)
H18A−0.27850.52550.31220.018*
H18B−0.27500.74340.31760.018*
C19−0.29383 (9)0.6284 (3)0.45638 (15)0.0144 (4)
H19A−0.27850.51660.49940.017*
H19B−0.27590.73410.50370.017*
C20−0.37459 (9)0.6351 (3)0.42130 (16)0.0162 (4)
H20A−0.39310.52900.37470.019*
H20B−0.39040.74690.37860.019*
C21−0.40379 (9)0.6331 (3)0.52132 (17)0.0219 (5)
H21A−0.45470.63850.49690.033*
H21B−0.38590.73860.56720.033*
H21C−0.38920.52100.56260.033*
H1O10.2698 (14)0.605 (3)−0.094 (2)0.059 (9)*
U11U22U33U12U13U23
O10.0199 (7)0.0333 (9)0.0108 (7)−0.0030 (6)0.0060 (6)0.0011 (6)
O20.0166 (6)0.0309 (8)0.0131 (7)0.0007 (6)0.0035 (6)0.0021 (6)
O30.0115 (6)0.0264 (8)0.0139 (7)0.0003 (5)0.0060 (5)−0.0003 (6)
C10.0167 (8)0.0195 (10)0.0137 (10)0.0012 (8)0.0078 (7)0.0006 (8)
C20.0174 (9)0.0295 (12)0.0132 (10)−0.0017 (8)0.0035 (8)0.0002 (9)
C30.0142 (8)0.0238 (11)0.0213 (11)−0.0006 (8)0.0068 (8)0.0018 (9)
C40.0179 (8)0.0193 (10)0.0198 (11)0.0006 (8)0.0125 (8)0.0021 (9)
C50.0203 (9)0.0132 (10)0.0127 (10)−0.0009 (7)0.0071 (8)0.0018 (8)
C60.0149 (8)0.0130 (10)0.0146 (10)0.0012 (7)0.0068 (7)0.0004 (8)
C70.0154 (8)0.0125 (9)0.0147 (10)0.0010 (7)0.0061 (7)0.0016 (8)
C80.0149 (8)0.0162 (10)0.0135 (10)0.0005 (7)0.0055 (7)0.0018 (8)
C90.0164 (8)0.0146 (10)0.0157 (10)0.0012 (7)0.0061 (7)0.0005 (8)
C100.0122 (8)0.0126 (9)0.0149 (10)−0.0001 (7)0.0049 (7)−0.0004 (8)
C110.0162 (8)0.0180 (10)0.0119 (10)0.0012 (7)0.0041 (7)0.0008 (8)
C120.0120 (8)0.0196 (10)0.0168 (10)0.0023 (7)0.0046 (7)0.0017 (9)
C130.0135 (8)0.0132 (9)0.0152 (10)0.0000 (7)0.0062 (7)−0.0021 (8)
C140.0152 (8)0.0202 (11)0.0111 (10)−0.0004 (7)0.0031 (7)0.0007 (8)
C150.0115 (8)0.0173 (10)0.0170 (10)−0.0010 (7)0.0033 (7)−0.0027 (8)
C160.0102 (7)0.0197 (10)0.0156 (10)0.0000 (7)0.0030 (7)−0.0002 (8)
C170.0145 (8)0.0177 (10)0.0142 (10)0.0016 (7)0.0061 (7)0.0004 (8)
C180.0148 (8)0.0167 (10)0.0153 (10)−0.0005 (7)0.0076 (7)−0.0008 (8)
C190.0148 (8)0.0158 (10)0.0138 (10)0.0000 (7)0.0060 (7)0.0003 (8)
C200.0150 (8)0.0172 (10)0.0175 (10)−0.0002 (7)0.0065 (7)0.0011 (8)
C210.0176 (9)0.0283 (12)0.0231 (12)0.0018 (8)0.0112 (8)0.0040 (10)
O1—C51.347 (2)C12—C131.384 (3)
O1—H1O10.90 (3)C12—H12A0.9300
O2—C71.246 (2)C13—C141.401 (2)
O3—C131.369 (2)C14—C151.376 (2)
O3—C161.438 (2)C14—H14A0.9300
C1—C21.378 (2)C15—H15A0.9300
C1—C61.400 (3)C16—C171.514 (2)
C1—H1A0.9300C16—H16A0.9700
C2—C31.397 (3)C16—H16B0.9700
C2—H2A0.9300C17—C181.524 (2)
C3—C41.378 (3)C17—H17A0.9700
C3—H3A0.9300C17—H17B0.9700
C4—C51.396 (2)C18—C191.531 (2)
C4—H4A0.9300C18—H18A0.9700
C5—C61.420 (2)C18—H18B0.9700
C6—C71.485 (2)C19—C201.522 (2)
C7—C81.470 (2)C19—H19A0.9700
C8—C91.348 (2)C19—H19B0.9700
C8—H8A0.9300C20—C211.530 (3)
C9—C101.451 (2)C20—H20A0.9700
C9—H9A0.9300C20—H20B0.9700
C10—C151.402 (3)C21—H21A0.9600
C10—C111.406 (2)C21—H21B0.9600
C11—C121.389 (2)C21—H21C0.9600
C11—H11A0.9300
C5—O1—H1O1105.5 (18)C15—C14—H14A120.0
C13—O3—C16118.03 (14)C13—C14—H14A120.0
C2—C1—C6121.83 (17)C14—C15—C10121.08 (16)
C2—C1—H1A119.1C14—C15—H15A119.5
C6—C1—H1A119.1C10—C15—H15A119.5
C1—C2—C3119.35 (19)O3—C16—C17106.20 (15)
C1—C2—H2A120.3O3—C16—H16A110.5
C3—C2—H2A120.3C17—C16—H16A110.5
C4—C3—C2120.63 (17)O3—C16—H16B110.5
C4—C3—H3A119.7C17—C16—H16B110.5
C2—C3—H3A119.7H16A—C16—H16B108.7
C3—C4—C5120.20 (17)C16—C17—C18113.20 (15)
C3—C4—H4A119.9C16—C17—H17A108.9
C5—C4—H4A119.9C18—C17—H17A108.9
O1—C5—C4117.70 (16)C16—C17—H17B108.9
O1—C5—C6122.21 (16)C18—C17—H17B108.9
C4—C5—C6120.09 (17)H17A—C17—H17B107.8
C1—C6—C5117.89 (15)C17—C18—C19110.86 (15)
C1—C6—C7123.40 (16)C17—C18—H18A109.5
C5—C6—C7118.71 (17)C19—C18—H18A109.5
O2—C7—C8119.66 (16)C17—C18—H18B109.5
O2—C7—C6119.24 (15)C19—C18—H18B109.5
C8—C7—C6121.09 (17)H18A—C18—H18B108.1
C9—C8—C7118.73 (18)C20—C19—C18114.03 (15)
C9—C8—H8A120.6C20—C19—H19A108.7
C7—C8—H8A120.6C18—C19—H19A108.7
C8—C9—C10129.22 (19)C20—C19—H19B108.7
C8—C9—H9A115.4C18—C19—H19B108.7
C10—C9—H9A115.4H19A—C19—H19B107.6
C15—C10—C11117.84 (15)C19—C20—C21111.23 (16)
C15—C10—C9124.12 (16)C19—C20—H20A109.4
C11—C10—C9118.03 (17)C21—C20—H20A109.4
C12—C11—C10121.51 (17)C19—C20—H20B109.4
C12—C11—H11A119.2C21—C20—H20B109.4
C10—C11—H11A119.2H20A—C20—H20B108.0
C13—C12—C11119.23 (16)C20—C21—H21A109.5
C13—C12—H12A120.4C20—C21—H21B109.5
C11—C12—H12A120.4H21A—C21—H21B109.5
O3—C13—C12125.07 (15)C20—C21—H21C109.5
O3—C13—C14114.56 (16)H21A—C21—H21C109.5
C12—C13—C14120.37 (16)H21B—C21—H21C109.5
C15—C14—C13119.97 (17)
C6—C1—C2—C30.9 (3)C8—C9—C10—C11175.97 (18)
C1—C2—C3—C4−0.1 (3)C15—C10—C11—C12−0.5 (3)
C2—C3—C4—C5−0.2 (3)C9—C10—C11—C12178.26 (17)
C3—C4—C5—O1179.86 (18)C10—C11—C12—C130.9 (3)
C3—C4—C5—C6−0.2 (3)C16—O3—C13—C120.5 (2)
C2—C1—C6—C5−1.3 (3)C16—O3—C13—C14−179.34 (15)
C2—C1—C6—C7178.43 (16)C11—C12—C13—O3179.13 (17)
O1—C5—C6—C1−179.10 (17)C11—C12—C13—C14−1.0 (3)
C4—C5—C6—C11.0 (3)O3—C13—C14—C15−179.48 (16)
O1—C5—C6—C71.1 (3)C12—C13—C14—C150.6 (3)
C4—C5—C6—C7−178.82 (16)C13—C14—C15—C10−0.2 (3)
C1—C6—C7—O2−179.21 (18)C11—C10—C15—C140.1 (3)
C5—C6—C7—O20.6 (3)C9—C10—C15—C14−178.55 (17)
C1—C6—C7—C80.2 (3)C13—O3—C16—C17−178.12 (14)
C5—C6—C7—C8179.95 (16)O3—C16—C17—C18−179.87 (14)
O2—C7—C8—C9−3.6 (3)C16—C17—C18—C19179.43 (15)
C6—C7—C8—C9177.02 (16)C17—C18—C19—C20−179.30 (15)
C7—C8—C9—C10178.62 (18)C18—C19—C20—C21−179.83 (15)
C8—C9—C10—C15−5.4 (3)
D—H···AD—HH···AD···AD—H···A
O1—H1O1···O20.90 (3)1.68 (3)2.507 (2)152 (2)
C20—H20A···Cg1i0.972.843.657 (2)142
C20—H20B···Cg1ii0.972.783.637 (2)147
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1O1⋯O20.90 (3)1.68 (3)2.507 (2)152 (2)
C20—H20ACg1i0.972.843.657 (2)142
C20—H20BCg1ii0.972.783.637 (2)147

Symmetry codes: (i) ; (ii) . Cg1 is the centroid of the C1-C6 ring.

  11 in total

1.  3D QSAR studies on antimalarial alkoxylated and hydroxylated chalcones by CoMFA and CoMSIA.

Authors:  C X Xue; S Y Cui; M C Liu; Z D Hu; B T Fan
Journal:  Eur J Med Chem       Date:  2004-09       Impact factor: 6.514

2.  Synthesis and biological evaluation of chalcones and their derived pyrazoles as potential cytotoxic agents.

Authors:  B A Bhat; K L Dhar; S C Puri; A K Saxena; M Shanmugavel; G N Qazi
Journal:  Bioorg Med Chem Lett       Date:  2005-06-15       Impact factor: 2.823

3.  Synthesis and evaluation of antiplatelet activity of trihydroxychalcone derivatives.

Authors:  Li-Ming Zhao; Hai-Shan Jin; Liang-Peng Sun; Hu-Ri Piao; Zhe-Shan Quan
Journal:  Bioorg Med Chem Lett       Date:  2005-11-15       Impact factor: 2.823

4.  Anti-angiogenic and anti-tumor activities of 2'-hydroxy-4'-methoxychalcone.

Authors:  Yeon Sil Lee; Soon Sung Lim; Kuk Hyun Shin; Yeong Shik Kim; Kazuo Ohuchi; Sang Hoon Jung
Journal:  Biol Pharm Bull       Date:  2006-05       Impact factor: 2.233

5.  (E)-3-[4-(Dodec-yloxy)phen-yl]-1-(2-hydroxy-phen-yl)prop-2-en-1-one.

Authors:  Ibrahim Abdul Razak; Hoong-Kun Fun; Zainab Ngaini; Siti Muhaini Haris Fadzillah; Hasnain Hussain
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-04-25

6.  (E)-3-[4-(Dec-yloxy)phen-yl]-1-(4-hydroxy-phen-yl)prop-2-en-1-one.

Authors:  Ibrahim Abdul Razak; Hoong-Kun Fun; Zainab Ngaini; Norashikin Irdawaty Abd Rahman; Hasnain Hussain
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-04-22

7.  (E)-3-(4-Decyl-oxyphen-yl)-1-(2-hydroxy-phen-yl)prop-2-en-1-one.

Authors:  Zainab Ngaini; Norashikin Irdawaty Abd Rahman; Hasnain Hussain; Ibrahim Abdul Razak; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-28

8.  (E)-3-(4-Hexyl-oxyphen-yl)-1-(3-hydroxy-phen-yl)prop-2-en-one.

Authors:  Zainab Ngaini; Siti Muhaini Haris Fadzillah; Norashikin Irdawaty Abd Rahman; Hasnain Hussain; Ibrahim Abdul Razak; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-28

9.  (E)-1-(4-Decyl-oxyphen-yl)-3-(4-hydroxy-phen-yl)prop-2-en-1-one.

Authors:  Ibrahim Abdul Razak; Hoong-Kun Fun; Zainab Ngaini; Siti Muhaini Haris Fadzillah; Hasnain Hussain
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-28

10.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
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  2 in total

1.  (2E)-3-(3,4-Dimeth-oxy-phen-yl)-1-(4-hy-droxy-phen-yl)prop-2-en-1-one.

Authors:  Jerry P Jasinski; Ray J Butcher; V Musthafa Khaleel; B K Sarojini; B Narayana
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-03-09

2.  (E)-3-(3,4-Dimeth-oxy-phen-yl)-1-(2-hy-droxy-phen-yl)prop-2-en-1-one.

Authors:  Jerry P Jasinski; Ray J Butcher; V Musthafa Khaleel; B K Sarojini; H S Yathirajan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-03-12
  2 in total

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