Literature DB >> 21582590

(E)-3-(4-Hexyl-oxyphen-yl)-1-(3-hydroxy-phen-yl)prop-2-en-one.

Zainab Ngaini, Siti Muhaini Haris Fadzillah, Norashikin Irdawaty Abd Rahman, Hasnain Hussain, Ibrahim Abdul Razak, Hoong-Kun Fun.   

Abstract

In the title compound, C(21)H(24)O(3), the enone unit is in the s-cis configuration. The dihedral angle between the benzene rings is 2.18 (4)°. In the crystal, mol-ecules are linked by pairs of O-H⋯O inter-molecular hydrogen bonds, forming inversion dimers. The crystal structure is also consolidated by C-H⋯π inter-actions.

Entities:  

Year:  2009        PMID: 21582590      PMCID: PMC2968884          DOI: 10.1107/S1600536809010617

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to the biological properties of chalcone derivatives, see: Bhat et al. (2005 ▶); Xue et al. (2004 ▶); Won et al. (2005 ▶); Yayli et al. (2006 ▶). For related structures, see: Ng, Razak et al. (2006 ▶); Ng, Patil et al. (2006 ▶). For details of hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For bond-length data, see: Allen et al. (1987 ▶). For the stability of the temperature controller uded in the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C21H24O3 M = 324.40 Monoclinic, a = 8.5918 (2) Å b = 17.1320 (3) Å c = 12.4192 (2) Å β = 109.083 (1)° V = 1727.58 (6) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 100 K 0.52 × 0.43 × 0.37 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.959, T max = 0.970 32772 measured reflections 7567 independent reflections 5739 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.131 S = 1.04 7567 reflections 222 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.48 e Å−3 Δρmin = −0.22 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809010617/fj2200sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809010617/fj2200Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H24O3F(000) = 696
Mr = 324.40Dx = 1.247 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 9979 reflections
a = 8.5918 (2) Åθ = 2.8–39.2°
b = 17.1320 (3) ŵ = 0.08 mm1
c = 12.4192 (2) ÅT = 100 K
β = 109.083 (1)°Block, colourless
V = 1727.58 (6) Å30.52 × 0.43 × 0.37 mm
Z = 4
Bruker APEXII CCD area-detector diffractometer7567 independent reflections
Radiation source: sealed tube5739 reflections with I > 2σ(I)
graphiteRint = 0.026
φ and ω scansθmax = 35.0°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −13→13
Tmin = 0.959, Tmax = 0.970k = −22→27
32772 measured reflectionsl = −18→20
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.131H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.0658P)2 + 0.3447P] where P = (Fo2 + 2Fc2)/3
7567 reflections(Δ/σ)max = 0.001
222 parametersΔρmax = 0.48 e Å3
0 restraintsΔρmin = −0.22 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O1−0.67033 (8)−0.16211 (4)−0.11538 (5)0.02019 (13)
O2−0.24091 (8)0.00815 (4)0.14823 (5)0.01889 (12)
O30.57829 (7)0.01121 (4)0.74453 (5)0.01808 (12)
C1−0.43937 (9)−0.11205 (4)0.03753 (6)0.01426 (13)
H1A−0.4490−0.06360.00230.017*
C2−0.54671 (10)−0.17174 (5)−0.01437 (6)0.01515 (14)
C3−0.53013 (10)−0.24523 (5)0.03709 (7)0.01738 (15)
H3A−0.6009−0.28560.00200.021*
C4−0.40736 (10)−0.25769 (5)0.14089 (7)0.01789 (15)
H4A−0.3966−0.30660.17510.021*
C5−0.30007 (10)−0.19778 (5)0.19442 (7)0.01605 (14)
H5A−0.2183−0.20660.26390.019*
C6−0.31644 (9)−0.12429 (4)0.14274 (6)0.01352 (13)
C7−0.20986 (9)−0.05615 (5)0.19509 (6)0.01364 (13)
C8−0.06986 (10)−0.06665 (5)0.30060 (6)0.01473 (13)
H8A−0.0520−0.11460.33760.018*
C90.03228 (10)−0.00634 (5)0.34327 (6)0.01478 (14)
H9A0.00840.03980.30160.018*
C100.17496 (9)−0.00406 (5)0.44610 (6)0.01412 (13)
C110.22794 (10)−0.06753 (5)0.52147 (7)0.01577 (14)
H11A0.1714−0.11470.50490.019*
C120.36209 (10)−0.06102 (5)0.61936 (7)0.01651 (14)
H12A0.3952−0.10360.66790.020*
C130.44893 (9)0.00985 (5)0.64597 (6)0.01485 (14)
C140.39946 (10)0.07342 (5)0.57204 (7)0.01645 (14)
H14A0.45600.12050.58860.020*
C150.26459 (10)0.06536 (5)0.47334 (7)0.01590 (14)
H15A0.23310.10760.42390.019*
C160.66971 (10)0.08312 (5)0.77343 (7)0.01598 (14)
H16A0.59810.12480.78180.019*
H16B0.71370.09750.71350.019*
C170.80851 (10)0.07101 (5)0.88414 (7)0.01625 (14)
H17A0.88120.03030.87420.019*
H17B0.76360.05400.94250.019*
C180.90687 (10)0.14613 (5)0.92278 (7)0.01651 (14)
H18A0.95360.16200.86490.020*
H18B0.83260.18710.92950.020*
C191.04510 (10)0.13787 (5)1.03599 (7)0.01726 (14)
H19A1.11880.09661.02960.021*
H19B0.99840.12271.09420.021*
C201.14369 (11)0.21270 (5)1.07309 (8)0.02270 (17)
H20A1.18930.22831.01450.027*
H20B1.07040.25381.08060.027*
C211.28308 (13)0.20366 (7)1.18553 (9)0.0326 (2)
H21A1.34780.25051.20150.049*
H21B1.35140.16041.18050.049*
H21C1.23790.19431.24560.049*
H101−0.6888 (18)−0.1130 (9)−0.1279 (12)0.042 (4)*
U11U22U33U12U13U23
O10.0200 (3)0.0164 (3)0.0173 (3)0.0002 (2)−0.0033 (2)−0.0017 (2)
O20.0204 (3)0.0150 (3)0.0177 (3)−0.0006 (2)0.0015 (2)0.0025 (2)
O30.0152 (3)0.0188 (3)0.0162 (3)−0.0034 (2)−0.0005 (2)−0.0007 (2)
C10.0138 (3)0.0135 (3)0.0142 (3)0.0008 (2)0.0029 (3)0.0001 (2)
C20.0138 (3)0.0162 (3)0.0137 (3)0.0009 (3)0.0020 (2)−0.0016 (2)
C30.0171 (3)0.0145 (3)0.0187 (3)−0.0014 (3)0.0033 (3)−0.0015 (3)
C40.0192 (4)0.0138 (3)0.0190 (3)0.0003 (3)0.0038 (3)0.0017 (3)
C50.0165 (3)0.0155 (3)0.0144 (3)0.0008 (3)0.0026 (3)0.0010 (3)
C60.0125 (3)0.0143 (3)0.0131 (3)0.0005 (2)0.0034 (2)−0.0006 (2)
C70.0129 (3)0.0151 (3)0.0127 (3)0.0001 (2)0.0037 (2)−0.0003 (2)
C80.0134 (3)0.0156 (3)0.0137 (3)0.0003 (2)0.0025 (2)0.0006 (2)
C90.0136 (3)0.0161 (3)0.0139 (3)0.0004 (3)0.0036 (2)−0.0008 (2)
C100.0128 (3)0.0156 (3)0.0136 (3)−0.0009 (2)0.0039 (2)−0.0013 (2)
C110.0146 (3)0.0153 (3)0.0164 (3)−0.0019 (3)0.0037 (3)−0.0007 (3)
C120.0155 (3)0.0164 (3)0.0161 (3)−0.0008 (3)0.0030 (3)0.0009 (3)
C130.0123 (3)0.0179 (3)0.0136 (3)−0.0004 (3)0.0032 (2)−0.0014 (2)
C140.0157 (3)0.0156 (3)0.0168 (3)−0.0025 (3)0.0035 (3)−0.0013 (3)
C150.0160 (3)0.0148 (3)0.0156 (3)−0.0006 (3)0.0033 (3)0.0004 (3)
C160.0135 (3)0.0175 (3)0.0160 (3)−0.0021 (3)0.0035 (3)−0.0019 (3)
C170.0133 (3)0.0190 (3)0.0150 (3)−0.0011 (3)0.0025 (3)−0.0004 (3)
C180.0143 (3)0.0172 (3)0.0161 (3)−0.0003 (3)0.0023 (3)−0.0003 (3)
C190.0152 (3)0.0190 (4)0.0153 (3)−0.0007 (3)0.0020 (3)−0.0003 (3)
C200.0204 (4)0.0199 (4)0.0235 (4)−0.0004 (3)0.0012 (3)−0.0051 (3)
C210.0271 (5)0.0418 (6)0.0223 (4)−0.0072 (4)−0.0010 (4)−0.0104 (4)
O1—C21.3631 (9)C12—C131.4067 (11)
O1—H1010.861 (16)C12—H12A0.9300
O2—C71.2336 (9)C13—C141.3980 (11)
O3—C131.3581 (9)C14—C151.3912 (11)
O3—C161.4419 (10)C14—H14A0.9300
C1—C21.3867 (11)C15—H15A0.9300
C1—C61.4016 (11)C16—C171.5111 (11)
C1—H1A0.9300C16—H16A0.9700
C2—C31.3980 (11)C16—H16B0.9700
C3—C41.3895 (11)C17—C181.5282 (11)
C3—H3A0.9300C17—H17A0.9700
C4—C51.3944 (11)C17—H17B0.9700
C4—H4A0.9300C18—C191.5217 (11)
C5—C61.3993 (11)C18—H18A0.9700
C5—H5A0.9300C18—H18B0.9700
C6—C71.4949 (11)C19—C201.5225 (12)
C7—C81.4717 (11)C19—H19A0.9700
C8—C91.3470 (11)C19—H19B0.9700
C8—H8A0.9300C20—C211.5214 (13)
C9—C101.4531 (11)C20—H20A0.9700
C9—H9A0.9300C20—H20B0.9700
C10—C151.3971 (11)C21—H21A0.9600
C10—C111.4096 (11)C21—H21B0.9600
C11—C121.3794 (11)C21—H21C0.9600
C11—H11A0.9300
C2—O1—H101109.0 (10)C15—C14—H14A120.4
C13—O3—C16117.24 (6)C13—C14—H14A120.4
C2—C1—C6120.45 (7)C14—C15—C10122.15 (7)
C2—C1—H1A119.8C14—C15—H15A118.9
C6—C1—H1A119.8C10—C15—H15A118.9
O1—C2—C1122.56 (7)O3—C16—C17108.23 (6)
O1—C2—C3117.51 (7)O3—C16—H16A110.1
C1—C2—C3119.92 (7)C17—C16—H16A110.1
C4—C3—C2119.70 (7)O3—C16—H16B110.1
C4—C3—H3A120.1C17—C16—H16B110.1
C2—C3—H3A120.1H16A—C16—H16B108.4
C3—C4—C5120.81 (7)C16—C17—C18111.16 (7)
C3—C4—H4A119.6C16—C17—H17A109.4
C5—C4—H4A119.6C18—C17—H17A109.4
C4—C5—C6119.47 (7)C16—C17—H17B109.4
C4—C5—H5A120.3C18—C17—H17B109.4
C6—C5—H5A120.3H17A—C17—H17B108.0
C5—C6—C1119.63 (7)C19—C18—C17113.34 (7)
C5—C6—C7123.22 (7)C19—C18—H18A108.9
C1—C6—C7117.14 (7)C17—C18—H18A108.9
O2—C7—C8121.13 (7)C19—C18—H18B108.9
O2—C7—C6119.01 (7)C17—C18—H18B108.9
C8—C7—C6119.86 (7)H18A—C18—H18B107.7
C9—C8—C7119.62 (7)C18—C19—C20112.97 (7)
C9—C8—H8A120.2C18—C19—H19A109.0
C7—C8—H8A120.2C20—C19—H19A109.0
C8—C9—C10128.33 (7)C18—C19—H19B109.0
C8—C9—H9A115.8C20—C19—H19B109.0
C10—C9—H9A115.8H19A—C19—H19B107.8
C15—C10—C11117.59 (7)C21—C20—C19112.66 (8)
C15—C10—C9118.39 (7)C21—C20—H20A109.1
C11—C10—C9124.01 (7)C19—C20—H20A109.1
C12—C11—C10121.22 (7)C21—C20—H20B109.1
C12—C11—H11A119.4C19—C20—H20B109.1
C10—C11—H11A119.4H20A—C20—H20B107.8
C11—C12—C13120.19 (7)C20—C21—H21A109.5
C11—C12—H12A119.9C20—C21—H21B109.5
C13—C12—H12A119.9H21A—C21—H21B109.5
O3—C13—C14124.19 (7)C20—C21—H21C109.5
O3—C13—C12116.20 (7)H21A—C21—H21C109.5
C14—C13—C12119.61 (7)H21B—C21—H21C109.5
C15—C14—C13119.22 (7)
C6—C1—C2—O1178.55 (7)C8—C9—C10—C11−1.52 (13)
C6—C1—C2—C3−1.49 (11)C15—C10—C11—C120.84 (11)
O1—C2—C3—C4−179.16 (7)C9—C10—C11—C12−178.31 (7)
C1—C2—C3—C40.88 (12)C10—C11—C12—C130.14 (12)
C2—C3—C4—C5−0.11 (12)C16—O3—C13—C14−0.26 (11)
C3—C4—C5—C6−0.05 (12)C16—O3—C13—C12179.73 (7)
C4—C5—C6—C1−0.54 (11)C11—C12—C13—O3179.37 (7)
C4—C5—C6—C7178.46 (7)C11—C12—C13—C14−0.64 (12)
C2—C1—C6—C51.32 (11)O3—C13—C14—C15−179.87 (7)
C2—C1—C6—C7−177.75 (7)C12—C13—C14—C150.13 (12)
C5—C6—C7—O2−174.30 (7)C13—C14—C15—C100.89 (12)
C1—C6—C7—O24.73 (10)C11—C10—C15—C14−1.37 (11)
C5—C6—C7—C86.05 (11)C9—C10—C15—C14177.83 (7)
C1—C6—C7—C8−174.92 (7)C13—O3—C16—C17−178.97 (6)
O2—C7—C8—C9−4.05 (11)O3—C16—C17—C18−177.65 (6)
C6—C7—C8—C9175.59 (7)C16—C17—C18—C19178.18 (6)
C7—C8—C9—C10179.11 (7)C17—C18—C19—C20179.31 (7)
C8—C9—C10—C15179.34 (8)C18—C19—C20—C21−179.22 (8)
D—H···AD—HH···AD···AD—H···A
O1—H101···O2i0.86 (2)1.89 (2)2.739 (1)171 (2)
C16—H16A···Cg1ii0.972.723.572 (1)146
C20—H20A···Cg1iii0.972.823.642 (1)143
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H101⋯O2i0.86 (2)1.89 (2)2.739 (1)171 (2)
C16—H16ACg1ii0.972.723.572 (1)146
C20—H20ACg1iii0.972.823.642 (1)143

Symmetry codes: (i) ; (ii) ; (iii) . Cg1 is the centroid of C1–C6 ring.

  5 in total

1.  3D QSAR studies on antimalarial alkoxylated and hydroxylated chalcones by CoMFA and CoMSIA.

Authors:  C X Xue; S Y Cui; M C Liu; Z D Hu; B T Fan
Journal:  Eur J Med Chem       Date:  2004-09       Impact factor: 6.514

2.  Synthesis and biological evaluation of chalcones and their derived pyrazoles as potential cytotoxic agents.

Authors:  B A Bhat; K L Dhar; S C Puri; A K Saxena; M Shanmugavel; G N Qazi
Journal:  Bioorg Med Chem Lett       Date:  2005-06-15       Impact factor: 2.823

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Synthetic chalcones as potential anti-inflammatory and cancer chemopreventive agents.

Authors:  Shen-Jeu Won; Cheng-Tsung Liu; Lo-Ti Tsao; Jing-Ru Weng; Horng-Huey Ko; Jih-Pyang Wang; Chun-Nan Lin
Journal:  Eur J Med Chem       Date:  2005-01       Impact factor: 6.514

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total
  7 in total

1.  (E)-3-[4-(Dodec-yloxy)phen-yl]-1-(2-hydroxy-phen-yl)prop-2-en-1-one.

Authors:  Ibrahim Abdul Razak; Hoong-Kun Fun; Zainab Ngaini; Siti Muhaini Haris Fadzillah; Hasnain Hussain
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-04-25

2.  (E)-3-[4-(Dec-yloxy)phen-yl]-1-(4-hydroxy-phen-yl)prop-2-en-1-one.

Authors:  Ibrahim Abdul Razak; Hoong-Kun Fun; Zainab Ngaini; Norashikin Irdawaty Abd Rahman; Hasnain Hussain
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-04-22

3.  (E)-3-[4-(Hex-yloxy)phen-yl]-1-(2-hydroxy-phen-yl)prop-2-en-1-one.

Authors:  Zainab Ngaini; Siti Muhaini Haris Fadzillah; Hasnain Hussain; Ibrahim Abdul Razak; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-05-14

4.  (E)-3-[4-(Hex-yloxy)phen-yl]-1-(4-hydroxy-phen-yl)prop-2-en-1-one.

Authors:  Ibrahim Abdul Razak; Hoong-Kun Fun; Zainab Ngaini; Norashikin Irdawaty Abd Rahman; Hasnain Hussain
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-05-29

5.  (E)-3-(4-Decyl-oxyphen-yl)-1-(2-hydroxy-phen-yl)prop-2-en-1-one.

Authors:  Zainab Ngaini; Norashikin Irdawaty Abd Rahman; Hasnain Hussain; Ibrahim Abdul Razak; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-28

6.  (E)-1-[4-(Hex-yloxy)phen-yl]-3-(4-hy-droxy-phen-yl)prop-2-en-1-one.

Authors:  Zainab Ngaini; Siti Muhaini Haris Fadzillah; Hasnain Hussain; Ibrahim Abdul Razak; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-12-18

7.  (E)-1-[4-(Hex-yloxy)phen-yl]-3-(3-hy-droxy-phen-yl)prop-2-en-1-one.

Authors:  Zainab Ngaini; Siti Muhaini Haris Fadzillah; Hasnain Hussain; Ibrahim Abdul Razak; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-11-24
  7 in total

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