Literature DB >> 21583146

Ethyl 2-benzyl-1-propyl-1H-indole-3-carboxyl-ate.

Peifan Li1, Wenjie Wang, Caiyun Li, Xiaoxia Bian.   

Abstract

In the title compound, C(21)H(23)NO(2), the dihedral angle between the indole ring system and the benzyl ring is 75.92 (9)°. The crystal packing is controlled by C-H⋯O and C-H⋯π inter-actions.

Entities:  

Year:  2009        PMID: 21583146      PMCID: PMC2969616          DOI: 10.1107/S1600536809016493

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of the title compound, see: Du et al. (2006 ▶). For its precursor, see: Jin et al. (2009 ▶).

Experimental

Crystal data

C21H23NO2 M = 321.40 Orthorhombic, a = 16.231 (3) Å b = 19.479 (4) Å c = 5.5226 (11) Å V = 1746.0 (6) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 113 K 0.20 × 0.16 × 0.12 mm

Data collection

Rigaku Saturn CCD area-detector diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005 ▶) T min = 0.985, T max = 0.991 13765 measured reflections 2204 independent reflections 2060 reflections with I > 2σ(I) R int = 0.044

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.102 S = 1.07 2204 reflections 220 parameters 1 restraint H-atom parameters constrained Δρmax = 0.18 e Å−3 Δρmin = −0.15 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: CrystalStructure (Rigaku/MSC, 2005 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809016493/hb2963sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809016493/hb2963Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H23NO2F(000) = 688
Mr = 321.40Dx = 1.223 Mg m3
Orthorhombic, Pna21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2c -2nCell parameters from 5126 reflections
a = 16.231 (3) Åθ = 2.4–27.5°
b = 19.479 (4) ŵ = 0.08 mm1
c = 5.5226 (11) ÅT = 113 K
V = 1746.0 (6) Å3Needle, colourless
Z = 40.20 × 0.16 × 0.12 mm
Rigaku Saturn CCD area-detector diffractometer2204 independent reflections
Radiation source: rotating anode2060 reflections with I > 2σ(I)
confocalRint = 0.044
Detector resolution: 7.31 pixels mm-1θmax = 27.5°, θmin = 2.4°
ω and φ scansh = −21→20
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005)k = −25→25
Tmin = 0.985, Tmax = 0.991l = −4→7
13765 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.044H-atom parameters constrained
wR(F2) = 0.102w = 1/[σ2(Fo2) + (0.0496P)2 + 0.3147P] where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max < 0.001
2204 reflectionsΔρmax = 0.18 e Å3
220 parametersΔρmin = −0.15 e Å3
1 restraintExtinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.044 (4)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.38761 (9)0.34048 (8)0.2851 (4)0.0430 (5)
O20.45086 (8)0.40505 (7)0.0042 (3)0.0357 (4)
N10.62712 (10)0.24714 (8)0.3130 (4)0.0294 (4)
C10.66004 (12)0.28279 (10)0.1183 (4)0.0300 (5)
C20.73763 (13)0.27623 (11)0.0133 (5)0.0355 (5)
H20.77680.24400.07180.043*
C30.75495 (13)0.31898 (11)−0.1805 (5)0.0392 (6)
H30.80750.3164−0.25570.047*
C40.69695 (14)0.36590 (11)−0.2680 (5)0.0383 (6)
H40.71070.3941−0.40230.046*
C50.62019 (13)0.37209 (10)−0.1635 (5)0.0339 (5)
H50.58130.4042−0.22450.041*
C60.60052 (12)0.33007 (10)0.0348 (4)0.0288 (4)
C70.52909 (13)0.32030 (9)0.1883 (4)0.0288 (5)
C80.54835 (12)0.26987 (10)0.3565 (5)0.0290 (4)
C90.67057 (12)0.19227 (10)0.4394 (5)0.0326 (5)
H9A0.64720.18730.60410.039*
H9B0.72930.20520.45680.039*
C100.66510 (12)0.12335 (10)0.3092 (5)0.0336 (5)
H10A0.60660.11030.28900.040*
H10B0.69010.12730.14640.040*
C110.70976 (14)0.06838 (11)0.4534 (5)0.0404 (6)
H11A0.76730.08210.47740.061*
H11B0.70790.02480.36470.061*
H11C0.68300.06270.61120.061*
C120.49933 (13)0.24338 (10)0.5656 (4)0.0315 (5)
H12A0.45300.27530.59630.038*
H12B0.53480.24330.71150.038*
C130.46466 (12)0.17145 (10)0.5295 (4)0.0271 (4)
C140.47834 (13)0.12068 (10)0.7011 (4)0.0317 (5)
H140.51210.13020.83760.038*
C150.44300 (14)0.05585 (11)0.6750 (5)0.0360 (5)
H150.45270.02140.79330.043*
C160.39379 (13)0.04180 (11)0.4763 (5)0.0350 (5)
H160.3692−0.00220.45890.042*
C170.38041 (13)0.09212 (10)0.3027 (5)0.0331 (5)
H170.34700.08250.16560.040*
C180.41579 (12)0.15656 (10)0.3295 (4)0.0296 (4)
H180.40650.19080.21000.036*
C190.44951 (13)0.35436 (10)0.1705 (4)0.0308 (5)
C200.37460 (14)0.44182 (11)−0.0340 (6)0.0410 (6)
H20A0.35650.46410.11800.049*
H20B0.33080.4099−0.08790.049*
C210.39091 (15)0.49475 (12)−0.2251 (5)0.0442 (6)
H21A0.43510.5254−0.17100.066*
H21B0.34070.5215−0.25390.066*
H21C0.40760.4719−0.37550.066*
U11U22U33U12U13U23
O10.0300 (8)0.0423 (8)0.0567 (13)0.0019 (6)0.0131 (9)0.0115 (9)
O20.0274 (7)0.0368 (8)0.0430 (10)−0.0020 (6)0.0009 (8)0.0075 (8)
N10.0260 (8)0.0311 (8)0.0312 (10)−0.0032 (6)0.0012 (8)−0.0027 (8)
C10.0266 (10)0.0306 (9)0.0327 (12)−0.0088 (8)0.0015 (9)−0.0073 (9)
C20.0254 (10)0.0386 (10)0.0426 (14)−0.0055 (8)0.0034 (10)−0.0085 (10)
C30.0303 (11)0.0443 (11)0.0430 (15)−0.0113 (9)0.0102 (11)−0.0075 (12)
C40.0378 (12)0.0397 (11)0.0375 (14)−0.0123 (9)0.0062 (11)−0.0025 (11)
C50.0336 (11)0.0316 (9)0.0365 (12)−0.0097 (8)0.0031 (10)−0.0032 (10)
C60.0280 (10)0.0285 (9)0.0299 (11)−0.0067 (7)0.0022 (9)−0.0053 (9)
C70.0274 (10)0.0270 (9)0.0319 (12)−0.0055 (7)0.0028 (9)−0.0027 (9)
C80.0268 (10)0.0302 (9)0.0299 (11)−0.0059 (8)0.0008 (9)−0.0049 (9)
C90.0292 (10)0.0361 (10)0.0325 (12)−0.0017 (8)−0.0030 (10)−0.0023 (10)
C100.0289 (10)0.0353 (10)0.0366 (13)−0.0010 (8)−0.0005 (10)−0.0015 (10)
C110.0380 (12)0.0375 (11)0.0457 (14)−0.0001 (9)−0.0005 (12)0.0050 (11)
C120.0324 (10)0.0342 (10)0.0278 (12)−0.0020 (8)0.0032 (9)−0.0037 (9)
C130.0231 (9)0.0308 (9)0.0273 (11)0.0012 (7)0.0046 (8)−0.0017 (9)
C140.0288 (10)0.0400 (10)0.0262 (11)−0.0006 (9)0.0007 (9)0.0025 (10)
C150.0359 (11)0.0382 (11)0.0338 (12)0.0039 (9)0.0005 (10)0.0059 (10)
C160.0388 (11)0.0308 (9)0.0352 (13)−0.0024 (8)0.0057 (10)−0.0003 (10)
C170.0336 (11)0.0373 (10)0.0283 (12)−0.0038 (8)−0.0018 (10)−0.0016 (10)
C180.0306 (10)0.0313 (9)0.0271 (11)−0.0001 (8)0.0008 (9)0.0017 (9)
C190.0292 (10)0.0280 (9)0.0353 (12)−0.0052 (8)0.0025 (10)−0.0018 (9)
C200.0327 (11)0.0392 (11)0.0512 (16)0.0003 (9)0.0010 (11)0.0093 (12)
C210.0441 (13)0.0411 (11)0.0474 (16)−0.0055 (10)−0.0029 (12)0.0099 (12)
O1—C191.218 (3)C10—H10B0.9900
O2—C191.349 (3)C11—H11A0.9800
O2—C201.446 (3)C11—H11B0.9800
N1—C81.374 (3)C11—H11C0.9800
N1—C11.387 (3)C12—C131.523 (3)
N1—C91.458 (3)C12—H12A0.9900
C1—C21.392 (3)C12—H12B0.9900
C1—C61.412 (3)C13—C141.387 (3)
C2—C31.385 (4)C13—C181.391 (3)
C2—H20.9500C14—C151.394 (3)
C3—C41.398 (3)C14—H140.9500
C3—H30.9500C15—C161.384 (3)
C4—C51.378 (3)C15—H150.9500
C4—H40.9500C16—C171.388 (3)
C5—C61.404 (3)C16—H160.9500
C5—H50.9500C17—C181.388 (3)
C6—C71.449 (3)C17—H170.9500
C7—C81.388 (3)C18—H180.9500
C7—C191.455 (3)C20—C211.499 (4)
C8—C121.494 (3)C20—H20A0.9900
C9—C101.526 (3)C20—H20B0.9900
C9—H9A0.9900C21—H21A0.9800
C9—H9B0.9900C21—H21B0.9800
C10—C111.518 (3)C21—H21C0.9800
C10—H10A0.9900
C19—O2—C20116.62 (17)C10—C11—H11C109.5
C8—N1—C1109.44 (18)H11A—C11—H11C109.5
C8—N1—C9127.0 (2)H11B—C11—H11C109.5
C1—N1—C9123.49 (17)C8—C12—C13114.42 (18)
N1—C1—C2128.7 (2)C8—C12—H12A108.7
N1—C1—C6108.43 (17)C13—C12—H12A108.7
C2—C1—C6122.9 (2)C8—C12—H12B108.7
C3—C2—C1116.8 (2)C13—C12—H12B108.7
C3—C2—H2121.6H12A—C12—H12B107.6
C1—C2—H2121.6C14—C13—C18119.03 (18)
C2—C3—C4121.6 (2)C14—C13—C12120.5 (2)
C2—C3—H3119.2C18—C13—C12120.43 (19)
C4—C3—H3119.2C13—C14—C15120.6 (2)
C5—C4—C3121.4 (2)C13—C14—H14119.7
C5—C4—H4119.3C15—C14—H14119.7
C3—C4—H4119.3C16—C15—C14119.9 (2)
C4—C5—C6118.8 (2)C16—C15—H15120.1
C4—C5—H5120.6C14—C15—H15120.1
C6—C5—H5120.6C15—C16—C17119.9 (2)
C5—C6—C1118.65 (19)C15—C16—H16120.1
C5—C6—C7135.6 (2)C17—C16—H16120.1
C1—C6—C7105.70 (19)C18—C17—C16120.0 (2)
C8—C7—C6107.73 (18)C18—C17—H17120.0
C8—C7—C19124.58 (19)C16—C17—H17120.0
C6—C7—C19127.7 (2)C17—C18—C13120.6 (2)
N1—C8—C7108.7 (2)C17—C18—H18119.7
N1—C8—C12121.3 (2)C13—C18—H18119.7
C7—C8—C12129.92 (19)O1—C19—O2121.99 (19)
N1—C9—C10113.02 (19)O1—C19—C7126.6 (2)
N1—C9—H9A109.0O2—C19—C7111.41 (18)
C10—C9—H9A109.0O2—C20—C21106.99 (19)
N1—C9—H9B109.0O2—C20—H20A110.3
C10—C9—H9B109.0C21—C20—H20A110.3
H9A—C9—H9B107.8O2—C20—H20B110.3
C11—C10—C9110.2 (2)C21—C20—H20B110.3
C11—C10—H10A109.6H20A—C20—H20B108.6
C9—C10—H10A109.6C20—C21—H21A109.5
C11—C10—H10B109.6C20—C21—H21B109.5
C9—C10—H10B109.6H21A—C21—H21B109.5
H10A—C10—H10B108.1C20—C21—H21C109.5
C10—C11—H11A109.5H21A—C21—H21C109.5
C10—C11—H11B109.5H21B—C21—H21C109.5
H11A—C11—H11B109.5
C8—N1—C1—C2−180.0 (2)C6—C7—C8—C12175.6 (2)
C9—N1—C1—C2−2.4 (3)C19—C7—C8—C12−6.3 (4)
C8—N1—C1—C60.2 (2)C8—N1—C9—C1096.0 (3)
C9—N1—C1—C6177.74 (19)C1—N1—C9—C10−81.1 (2)
N1—C1—C2—C3−179.6 (2)N1—C9—C10—C11−178.64 (18)
C6—C1—C2—C30.2 (3)N1—C8—C12—C13−75.8 (3)
C1—C2—C3—C4−0.7 (3)C7—C8—C12—C13107.9 (2)
C2—C3—C4—C50.6 (4)C8—C12—C13—C14127.6 (2)
C3—C4—C5—C6−0.1 (3)C8—C12—C13—C18−55.3 (3)
C4—C5—C6—C1−0.4 (3)C18—C13—C14—C15−0.6 (3)
C4—C5—C6—C7−179.1 (2)C12—C13—C14—C15176.5 (2)
N1—C1—C6—C5−179.83 (18)C13—C14—C15—C160.0 (3)
C2—C1—C6—C50.3 (3)C14—C15—C16—C170.6 (3)
N1—C1—C6—C7−0.8 (2)C15—C16—C17—C18−0.5 (3)
C2—C1—C6—C7179.4 (2)C16—C17—C18—C13−0.1 (3)
C5—C6—C7—C8179.9 (2)C14—C13—C18—C170.7 (3)
C1—C6—C7—C81.1 (2)C12—C13—C18—C17−176.49 (19)
C5—C6—C7—C191.8 (4)C20—O2—C19—O1−0.7 (3)
C1—C6—C7—C19−177.0 (2)C20—O2—C19—C7178.6 (2)
C1—N1—C8—C70.5 (2)C8—C7—C19—O1−5.9 (4)
C9—N1—C8—C7−176.92 (19)C6—C7—C19—O1171.8 (2)
C1—N1—C8—C12−176.43 (18)C8—C7—C19—O2174.8 (2)
C9—N1—C8—C126.1 (3)C6—C7—C19—O2−7.5 (3)
C6—C7—C8—N1−1.0 (2)C19—O2—C20—C21−179.8 (2)
C19—C7—C8—N1177.15 (19)
D—H···AD—HH···AD···AD—H···A
C2—H2···O1i0.952.713.653 (3)173
C9—H9B···O1i0.992.883.680 (3)138
C11—H11A···O1i0.982.693.514 (3)142
C12—H12A···O10.992.393.044 (3)123
C18—H18···O10.952.963.620 (3)128
C21—H21A···O2ii0.982.913.555 (3)124
C3—H3···Cgiii0.952.823.632 (3)144
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C2—H2⋯O1i0.952.713.653 (3)173
C9—H9B⋯O1i0.992.883.680 (3)138
C11—H11A⋯O1i0.982.693.514 (3)142
C12—H12A⋯O10.992.393.044 (3)123
C18—H18⋯O10.952.963.620 (3)128
C21—H21A⋯O2ii0.982.913.555 (3)124
C3—H3⋯Cgiii0.952.823.632 (3)144

Symmetry codes: (i) ; (ii) ; (iii) . Cg is the centroid of the C13–C18 ring.

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