Literature DB >> 21583083

2-Carb-oxy-1-phenyl-ethanaminium perchlorate.

Xiu-Zhi Li1, Hui Li, Zhi-Rong Qu.   

Abstract

In the title compound, C(9)H(12)NO(2) (+)·ClO(4) (-), an intra-molecular N-H⋯O inter-action results in the formation of a six-membered ring having a twisted chair conformation. In the crystal structure, inter-molecular O-H⋯O, N-H⋯O and C-H⋯O inter-actions link the mol-ecules into a network. A weak C-H⋯π inter-action is also found.

Entities:  

Year:  2009        PMID: 21583083      PMCID: PMC2969710          DOI: 10.1107/S1600536809016171

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

There has been an increased inter­est in the enanti­omeric preparation of β-amino acids as precursors for the synthesis of novel biologically active compounds, see: Arki et al. (2004 ▶); Cohen et al. (2002 ▶); Zeller et al. (1965 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C9H12NO2n class="Chemical">ClO4 − M = 265.65 Orthorhombic, a = 6.6583 (13) Å b = 13.826 (3) Å c = 24.300 (5) Å V = 2237.0 (8) Å3 Z = 8 Mo Kα radiation μ = 0.36 mm−1 T = 294 K 0.45 × 0.35 × 0.12 mm

Data collection

Rigaku SCXmini diffractometer Absorption correction: multi-scan (Blessing, 1995 ▶) T min = 0.863, T max = 0.957 21012 measured reflections 2560 independent reflections 1966 reflections with I > 2σ(I) R int = 0.058

Refinement

R[F 2 > 2σ(F 2)] = 0.053 wR(F 2) = 0.110 S = 1.10 2560 reflections 156 parameters H-atom parameters constrained Δρmax = 0.27 e Å−3 Δρmin = −0.37 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809016171/hk2675sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809016171/hk2675Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C9H12NO2+·ClO4F(000) = 1104
Mr = 265.65Dx = 1.578 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 1979 reflections
a = 6.6583 (13) Åθ = 3.1–27.5°
b = 13.826 (3) ŵ = 0.36 mm1
c = 24.300 (5) ÅT = 294 K
V = 2237.0 (8) Å3Prism, colorless
Z = 80.45 × 0.35 × 0.12 mm
Rigaku SCXmini diffractometer2560 independent reflections
Radiation source: fine-focus sealed tube1966 reflections with I > 2σ(I)
graphiteRint = 0.058
CCD_Profile_fitting scansθmax = 27.5°, θmin = 3.1°
Absorption correction: multi-scan (Blessing, 1995)h = −8→8
Tmin = 0.863, Tmax = 0.957k = −17→17
21012 measured reflectionsl = −31→31
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.053Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.110H-atom parameters constrained
S = 1.10w = 1/[σ2(Fo2) + (0.0351P)2 + 1.6729P] where P = (Fo2 + 2Fc2)/3
2560 reflections(Δ/σ)max < 0.001
156 parametersΔρmax = 0.27 e Å3
0 restraintsΔρmin = −0.37 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.99041 (8)0.97917 (4)0.32015 (2)0.03337 (17)
O10.9660 (3)0.30715 (14)0.32107 (7)0.0428 (5)
H11.02620.31820.29230.064*
O20.7570 (2)0.22973 (13)0.26501 (6)0.0365 (4)
O31.0688 (3)1.07288 (12)0.30762 (7)0.0439 (5)
O40.9012 (3)0.94103 (16)0.27168 (8)0.0630 (6)
O51.1483 (3)0.91952 (15)0.33824 (10)0.0649 (6)
O60.8413 (3)0.98786 (15)0.36203 (8)0.0584 (6)
N10.4988 (3)0.09957 (16)0.31532 (7)0.0349 (5)
H1A0.57720.05500.33070.052*
H1B0.54910.11650.28280.052*
H1C0.37590.07560.31070.052*
C10.8076 (3)0.25365 (17)0.31064 (9)0.0289 (5)
C20.6999 (3)0.22487 (17)0.36217 (9)0.0306 (5)
H2A0.69110.28060.38630.037*
H2B0.77780.17560.38100.037*
C30.4889 (3)0.18613 (17)0.35177 (9)0.0289 (5)
H30.41390.23640.33210.035*
C40.3749 (3)0.16333 (17)0.40392 (9)0.0310 (5)
C50.3897 (4)0.0760 (2)0.43014 (10)0.0464 (7)
H50.47660.02890.41670.056*
C60.2752 (5)0.0576 (2)0.47670 (12)0.0565 (8)
H60.2840−0.00230.49400.068*
C70.1499 (4)0.1267 (2)0.49722 (11)0.0537 (8)
H70.07390.11430.52860.064*
C80.1367 (4)0.2138 (2)0.47155 (11)0.0493 (7)
H80.05240.26130.48570.059*
C90.2472 (4)0.2322 (2)0.42480 (9)0.0390 (6)
H90.23520.29160.40720.047*
U11U22U33U12U13U23
Cl10.0277 (3)0.0306 (3)0.0418 (3)−0.0002 (2)0.0000 (2)0.0054 (3)
O10.0336 (10)0.0582 (12)0.0365 (9)−0.0188 (8)0.0033 (8)−0.0024 (9)
O20.0335 (9)0.0489 (10)0.0270 (8)−0.0081 (8)0.0018 (7)−0.0040 (7)
O30.0422 (10)0.0332 (10)0.0564 (11)−0.0080 (8)−0.0014 (9)0.0095 (8)
O40.0594 (13)0.0684 (14)0.0612 (13)−0.0217 (11)−0.0103 (11)−0.0133 (11)
O50.0553 (13)0.0554 (13)0.0841 (15)0.0219 (11)−0.0044 (12)0.0233 (11)
O60.0517 (12)0.0644 (13)0.0591 (12)0.0037 (10)0.0210 (10)0.0119 (11)
N10.0307 (11)0.0439 (12)0.0300 (10)−0.0085 (9)0.0019 (9)−0.0045 (9)
C10.0242 (11)0.0291 (12)0.0333 (12)0.0002 (9)0.0011 (9)−0.0020 (10)
C20.0296 (12)0.0359 (13)0.0262 (11)−0.0056 (10)−0.0013 (9)−0.0024 (10)
C30.0253 (11)0.0355 (13)0.0259 (11)0.0009 (10)0.0013 (9)−0.0003 (9)
C40.0238 (11)0.0435 (14)0.0256 (11)−0.0039 (10)−0.0005 (9)0.0008 (10)
C50.0485 (16)0.0501 (16)0.0406 (14)0.0037 (13)0.0071 (13)0.0065 (13)
C60.066 (2)0.0596 (19)0.0435 (16)−0.0121 (16)0.0047 (15)0.0180 (14)
C70.0425 (16)0.085 (2)0.0339 (14)−0.0167 (16)0.0088 (12)0.0037 (15)
C80.0388 (15)0.073 (2)0.0363 (14)0.0045 (14)0.0094 (12)−0.0057 (14)
C90.0323 (12)0.0520 (16)0.0326 (12)0.0016 (11)0.0003 (11)0.0012 (12)
Cl1—O51.4067 (19)C3—N11.490 (3)
Cl1—O41.421 (2)C3—C41.510 (3)
Cl1—O61.4269 (19)C3—H30.9800
Cl1—O31.4297 (18)C4—C51.369 (3)
O1—H10.8200C4—C91.373 (3)
N1—H1A0.8900C5—C61.388 (4)
N1—H1B0.8900C5—H50.9300
N1—H1C0.8900C6—C71.363 (4)
C1—O21.205 (3)C6—H60.9300
C1—O11.313 (3)C7—C81.359 (4)
C1—C21.497 (3)C7—H70.9300
C2—C31.524 (3)C8—C91.377 (3)
C2—H2A0.9700C8—H80.9300
C2—H2B0.9700C9—H90.9300
O5—Cl1—O4110.73 (15)N1—C3—C2109.89 (18)
O5—Cl1—O6110.28 (13)C4—C3—C2113.42 (18)
O4—Cl1—O6109.36 (13)N1—C3—H3107.5
O5—Cl1—O3108.97 (12)C4—C3—H3107.5
O4—Cl1—O3108.21 (12)C2—C3—H3107.5
O6—Cl1—O3109.25 (12)C5—C4—C9119.0 (2)
C1—O1—H1109.5C5—C4—C3122.6 (2)
C3—N1—H1A109.5C9—C4—C3118.5 (2)
C3—N1—H1B109.5C4—C5—C6120.1 (3)
C3—N1—H1C109.5C4—C5—H5120.0
H1A—N1—H1B109.5C6—C5—H5120.0
H1A—N1—H1C109.5C7—C6—C5120.4 (3)
H1B—N1—H1C109.5C7—C6—H6119.8
O2—C1—O1123.8 (2)C5—C6—H6119.8
O2—C1—C2124.2 (2)C8—C7—C6119.5 (3)
O1—C1—C2111.91 (19)C8—C7—H7120.2
C1—C2—C3113.35 (18)C6—C7—H7120.2
C1—C2—H2A108.9C7—C8—C9120.5 (3)
C3—C2—H2A108.9C7—C8—H8119.7
C1—C2—H2B108.9C9—C8—H8119.7
C3—C2—H2B108.9C4—C9—C8120.5 (3)
H2A—C2—H2B107.7C4—C9—H9119.7
N1—C3—C4110.68 (19)C8—C9—H9119.7
D—H···AD—HH···AD···AD—H···A
N1—H1B···O20.892.132.773 (3)128
C9—H9···O5i0.932.563.409 (3)152
C3—H3···O5i0.982.573.370 (3)139
C3—H3···O2ii0.982.583.286 (3)129
N1—H1C···O3iii0.892.052.892 (3)158
N1—H1B···O3iv0.892.283.046 (3)144
N1—H1A···O6v0.892.132.979 (3)159
O1—H1···O2vi0.822.413.046 (2)135
O1—H1···O4vii0.822.353.048 (3)143
C8—H8···Cg1viii0.932.793.688 (3)162
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1B⋯O20.892.132.773 (3)128
C9—H9⋯O5i0.932.563.409 (3)152
C3—H3⋯O5i0.982.573.370 (3)139
C3—H3⋯O2ii0.982.583.286 (3)129
N1—H1C⋯O3iii0.892.052.892 (3)158
N1—H1B⋯O3iv0.892.283.046 (3)144
N1—H1A⋯O6v0.892.132.979 (3)159
O1—H1⋯O2vi0.822.413.046 (2)135
O1—H1⋯O4vii0.822.353.048 (3)143
C8—H8⋯Cg1viii0.932.793.688 (3)162

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) ; (viii) . Cg1 is the centroid of the C4–C9 ring.

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1.  A short history of SHELX.

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2.  An empirical correction for absorption anisotropy.

Authors:  R H Blessing
Journal:  Acta Crystallogr A       Date:  1995-01-01       Impact factor: 2.290

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Authors:  E A ZELLER; G RAMACHANDER; G A FLEISHER; T ISHIMARU; V ZELLER
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