Literature DB >> 21583000

Poly[(μ(2)-azido-κN:N)[μ(2)-5-(8-quinolyl-oxy-methyl)tetra-zolato-κN,O,N:N]zinc(II)].

Hong-Ling Cai1.   

Abstract

In the title compound, [Zn(C(11)H(8)N(5)O)(N(3))](n), the Zn atom is hexa-coordinated by five N atoms and one O atom in a distorted octa-hedral geometry. The chelating 5-(8-quinolyloxymeth-yl)tetra-zolate ligands are approximately planar, with a dihedral angle of 3.6 (2)° between the quinoline and tetra-zole planes. Adjacent Zn atoms are linked by two bridging azide ligands across a centre of inversion, and further coordination by one N atom of an adjacent tetra-zole unit forms two-dimensional frameworks in (100). C-H⋯N inter-actions exist between ligands in neighbouring layers.

Entities:  

Year:  2009        PMID: 21583000      PMCID: PMC2969550          DOI: 10.1107/S1600536809016924

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the use of tetra­zole derivatives in coordination chemistry, see: Wang et al. (2005 ▶); Xiong et al. (2002 ▶). For details of the synthetis, see: Luo & Ye (2008 ▶). For related structures, see: Wang & Ye (2008 ▶); Chen & Ye (2008 ▶).

Experimental

Crystal data

[Zn(C11H8N5O)(N3)] M = 333.64 Monoclinic, a = 10.352 (8) Å b = 14.108 (9) Å c = 8.626 (8) Å β = 90.31 (2)° V = 1259.8 (17) Å3 Z = 4 Mo Kα radiation μ = 1.96 mm−1 T = 294 K 0.18 × 0.12 × 0.10 mm

Data collection

Rigaku SCXmini CCD diffractometer Absorption correction: multi-scan CrystalClear (Rigaku, 2005 ▶) T min = 0.714, T max = 0.821 11540 measured reflections 2714 independent reflections 2261 reflections with I > 2σ(I) R int = 0.059

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.183 S = 1.19 2714 reflections 190 parameters H-atom parameters constrained Δρmax = 0.63 e Å−3 Δρmin = −0.71 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809016924/bi2367sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809016924/bi2367Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn(C11H8N5O)(N3)]F(000) = 672
Mr = 333.64Dx = 1.759 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3428 reflections
a = 10.352 (8) Åθ = 2.0–27.3°
b = 14.108 (9) ŵ = 1.96 mm1
c = 8.626 (8) ÅT = 294 K
β = 90.31 (2)°Block, pale yellow
V = 1259.8 (17) Å30.18 × 0.12 × 0.10 mm
Z = 4
Rigaku SCXmini CCD diffractometer2714 independent reflections
Radiation source: fine-focus sealed tube2261 reflections with I > 2σ(I)
graphiteRint = 0.059
ω scansθmax = 27.3°, θmin = 2.0°
Absorption correction: multi-scan CrystalClear (Rigaku, 2005)h = −13→13
Tmin = 0.714, Tmax = 0.821k = −18→18
11540 measured reflectionsl = −11→11
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.183H-atom parameters constrained
S = 1.19w = 1/[σ2(Fo2) + (0.0764P)2] where P = (Fo2 + 2Fc2)/3
2714 reflections(Δ/σ)max < 0.001
190 parametersΔρmax = 0.63 e Å3
0 restraintsΔρmin = −0.71 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Zn10.95242 (4)0.90443 (3)0.09995 (5)0.0298 (2)
N50.7775 (3)0.9622 (3)0.1958 (4)0.0347 (8)
N11.0142 (3)0.7920 (3)−0.0386 (4)0.0374 (8)
O10.7733 (3)0.8144 (2)0.0151 (4)0.0420 (8)
C90.6528 (4)0.8458 (3)0.0556 (5)0.0343 (9)
C80.5420 (4)0.9627 (4)0.2162 (6)0.0447 (11)
C70.7806 (5)1.0369 (3)0.2914 (5)0.0433 (11)
H7A0.86051.06290.31730.052*
C60.6587 (4)0.9259 (3)0.1565 (5)0.0326 (9)
C50.4240 (5)0.9206 (4)0.1716 (8)0.0595 (15)
H5A0.34690.94470.21000.071*
C40.5380 (4)0.8062 (3)0.0114 (6)0.0471 (11)
H4A0.53660.7553−0.05710.056*
C30.4212 (5)0.8432 (4)0.0705 (8)0.0621 (15)
H3A0.34270.81610.04210.075*
C20.5503 (5)1.0407 (4)0.3162 (6)0.0551 (14)
H2A0.47551.06740.35660.066*
C110.7891 (4)0.7426 (3)−0.0998 (5)0.0340 (9)
H11A0.74930.7611−0.19730.041*
H11B0.75210.6829−0.06610.041*
N21.1345 (4)0.7624 (3)−0.0749 (5)0.0488 (10)
C100.9352 (4)0.7353 (3)−0.1149 (5)0.0319 (8)
N61.0849 (3)1.0102 (3)0.1218 (4)0.0351 (8)
N31.1247 (4)0.6921 (3)−0.1722 (5)0.0504 (11)
C10.6690 (6)1.0780 (4)0.3545 (7)0.0538 (13)
H1A0.67531.12960.42120.065*
N71.1303 (4)1.0413 (3)0.2394 (4)0.0382 (8)
N81.1778 (6)1.0723 (4)0.3487 (6)0.0664 (14)
N40.9978 (3)0.6719 (3)−0.1977 (4)0.0371 (8)
U11U22U33U12U13U23
Zn10.0276 (3)0.0278 (3)0.0339 (3)−0.00349 (16)0.0000 (2)−0.00067 (16)
N50.0353 (18)0.0345 (18)0.0345 (18)0.0002 (15)0.0042 (15)0.0007 (15)
N10.0323 (18)0.039 (2)0.041 (2)0.0005 (15)−0.0040 (16)−0.0074 (16)
O10.0300 (15)0.0434 (17)0.0526 (19)−0.0026 (13)0.0022 (14)−0.0189 (14)
C90.029 (2)0.034 (2)0.040 (2)−0.0011 (16)0.0015 (17)0.0019 (17)
C80.032 (2)0.049 (3)0.053 (3)0.011 (2)0.005 (2)0.006 (2)
C70.046 (3)0.041 (2)0.044 (2)−0.004 (2)0.003 (2)−0.011 (2)
C60.028 (2)0.036 (2)0.034 (2)−0.0015 (17)0.0012 (17)0.0041 (17)
C50.030 (3)0.057 (3)0.092 (5)0.008 (2)0.007 (3)0.003 (3)
C40.036 (2)0.044 (3)0.061 (3)−0.006 (2)−0.005 (2)0.004 (2)
C30.030 (2)0.069 (4)0.087 (4)−0.005 (2)−0.005 (3)−0.001 (3)
C20.044 (3)0.061 (3)0.061 (3)0.016 (2)0.015 (2)−0.012 (3)
C110.038 (2)0.031 (2)0.033 (2)−0.0013 (17)0.0002 (17)−0.0049 (16)
N20.037 (2)0.050 (2)0.059 (3)0.0069 (18)−0.0083 (19)−0.011 (2)
C100.039 (2)0.0271 (19)0.0290 (18)−0.0014 (16)−0.0001 (16)−0.0019 (15)
N60.0348 (18)0.0364 (19)0.0341 (18)−0.0118 (15)−0.0039 (15)0.0024 (14)
N30.036 (2)0.054 (3)0.061 (3)0.0023 (18)−0.0036 (19)−0.019 (2)
C10.055 (3)0.049 (3)0.057 (3)0.002 (2)0.012 (3)−0.017 (3)
N70.041 (2)0.0360 (19)0.0371 (19)−0.0044 (16)−0.0013 (16)−0.0009 (15)
N80.089 (4)0.062 (3)0.048 (3)−0.012 (3)−0.018 (3)−0.013 (2)
N40.0325 (18)0.0384 (19)0.0403 (19)0.0055 (15)−0.0001 (15)−0.0099 (16)
Zn1—N62.035 (4)C5—C31.398 (9)
Zn1—N12.088 (4)C5—H5A0.930
Zn1—N4i2.102 (4)C4—C31.415 (7)
Zn1—N52.155 (4)C4—H4A0.930
Zn1—N6ii2.291 (4)C3—H3A0.930
Zn1—O12.360 (4)C2—C11.376 (8)
N5—C71.338 (6)C2—H2A0.930
N5—C61.373 (6)C11—C101.522 (6)
N1—C101.318 (5)C11—H11A0.970
N1—N21.352 (5)C11—H11B0.970
O1—C91.371 (5)N2—N31.302 (6)
O1—C111.428 (5)C10—N41.318 (5)
C9—C41.366 (6)N6—N71.199 (5)
C9—C61.426 (6)N6—Zn1ii2.291 (4)
C8—C21.401 (7)N3—N41.361 (6)
C8—C51.410 (8)C1—H1A0.930
C8—C61.415 (6)N7—N81.147 (6)
C7—C11.405 (7)N4—Zn1iii2.102 (4)
C7—H7A0.930
N6—Zn1—N1113.67 (17)C8—C6—C9118.6 (4)
N6—Zn1—N4i98.71 (15)C3—C5—C8120.9 (5)
N1—Zn1—N4i91.07 (17)C3—C5—H5A119.5
N6—Zn1—N5104.72 (17)C8—C5—H5A119.5
N1—Zn1—N5140.15 (14)C9—C4—C3119.5 (5)
N4i—Zn1—N593.41 (15)C9—C4—H4A120.2
N6—Zn1—N6ii78.59 (15)C3—C4—H4A120.2
N1—Zn1—N6ii88.40 (17)C5—C3—C4119.9 (5)
N4i—Zn1—N6ii176.76 (13)C5—C3—H3A120.1
N5—Zn1—N6ii89.04 (15)C4—C3—H3A120.1
N6—Zn1—O1162.00 (14)C1—C2—C8120.0 (5)
N1—Zn1—O169.91 (14)C1—C2—H2A120.0
N4i—Zn1—O198.84 (14)C8—C2—H2A120.0
N5—Zn1—O170.27 (15)O1—C11—C10103.0 (3)
N6ii—Zn1—O183.98 (13)O1—C11—H11A111.2
C7—N5—C6117.7 (4)C10—C11—H11A111.2
C7—N5—Zn1121.1 (3)O1—C11—H11B111.2
C6—N5—Zn1121.1 (3)C10—C11—H11B111.2
C10—N1—N2105.5 (4)H11A—C11—H11B109.1
C10—N1—Zn1123.8 (3)N3—N2—N1108.4 (4)
N2—N1—Zn1130.7 (3)N4—C10—N1112.2 (4)
C9—O1—C11120.9 (3)N4—C10—C11125.7 (4)
C9—O1—Zn1117.5 (3)N1—C10—C11122.1 (4)
C11—O1—Zn1120.3 (2)N7—N6—Zn1127.4 (3)
C4—C9—O1126.0 (4)N7—N6—Zn1ii125.3 (3)
C4—C9—C6121.9 (4)Zn1—N6—Zn1ii101.41 (15)
O1—C9—C6112.0 (4)N2—N3—N4109.7 (4)
C2—C8—C5123.3 (5)C2—C1—C7119.0 (5)
C2—C8—C6117.6 (5)C2—C1—H1A120.5
C5—C8—C6119.1 (5)C7—C1—H1A120.5
N5—C7—C1123.1 (5)N8—N7—N6177.4 (5)
N5—C7—H7A118.4C10—N4—N3104.3 (4)
C1—C7—H7A118.4C10—N4—Zn1iii133.6 (3)
N5—C6—C8122.5 (4)N3—N4—Zn1iii117.0 (3)
N5—C6—C9118.8 (4)
N6—Zn1—N5—C7−19.6 (4)C5—C8—C6—C9−1.4 (7)
N1—Zn1—N5—C7176.1 (3)C4—C9—C6—N5−179.8 (4)
N4i—Zn1—N5—C780.3 (4)O1—C9—C6—N51.8 (6)
N6ii—Zn1—N5—C7−97.6 (4)C4—C9—C6—C82.3 (7)
O1—Zn1—N5—C7178.5 (4)O1—C9—C6—C8−176.1 (4)
N6—Zn1—N5—C6158.0 (3)C2—C8—C5—C3179.5 (5)
N1—Zn1—N5—C6−6.3 (4)C6—C8—C5—C30.4 (9)
N4i—Zn1—N5—C6−102.1 (3)O1—C9—C4—C3176.1 (5)
N6ii—Zn1—N5—C680.0 (3)C6—C9—C4—C3−2.0 (7)
O1—Zn1—N5—C6−3.9 (3)C8—C5—C3—C4−0.1 (10)
N6—Zn1—N1—C10−154.1 (3)C9—C4—C3—C50.9 (9)
N4i—Zn1—N1—C10106.0 (4)C5—C8—C2—C1−180.0 (6)
N5—Zn1—N1—C109.3 (5)C6—C8—C2—C1−0.8 (8)
N6ii—Zn1—N1—C10−77.3 (4)C9—O1—C11—C10176.3 (4)
O1—Zn1—N1—C106.9 (3)Zn1—O1—C11—C109.5 (4)
N6—Zn1—N1—N223.8 (5)C10—N1—N2—N31.5 (5)
N4i—Zn1—N1—N2−76.2 (4)Zn1—N1—N2—N3−176.6 (3)
N5—Zn1—N1—N2−172.8 (3)N2—N1—C10—N4−0.3 (5)
N6ii—Zn1—N1—N2100.6 (4)Zn1—N1—C10—N4178.0 (3)
O1—Zn1—N1—N2−175.2 (4)N2—N1—C10—C11177.4 (4)
N6—Zn1—O1—C9−71.8 (5)Zn1—N1—C10—C11−4.3 (6)
N1—Zn1—O1—C9−176.7 (3)O1—C11—C10—N4173.4 (4)
N4i—Zn1—O1—C995.4 (3)O1—C11—C10—N1−3.9 (5)
N5—Zn1—O1—C94.9 (3)N1—Zn1—N6—N7−123.2 (4)
N6ii—Zn1—O1—C9−86.2 (3)N4i—Zn1—N6—N7−28.2 (4)
N6—Zn1—O1—C1195.5 (5)N5—Zn1—N6—N767.7 (4)
N1—Zn1—O1—C11−9.5 (3)N6ii—Zn1—N6—N7153.7 (5)
N4i—Zn1—O1—C11−97.4 (3)O1—Zn1—N6—N7139.0 (4)
N5—Zn1—O1—C11172.1 (3)N1—Zn1—N6—Zn1ii83.13 (19)
N6ii—Zn1—O1—C1181.0 (3)N4i—Zn1—N6—Zn1ii178.17 (15)
C11—O1—C9—C49.5 (7)N5—Zn1—N6—Zn1ii−85.94 (17)
Zn1—O1—C9—C4176.6 (4)N6ii—Zn1—N6—Zn1ii0.0
C11—O1—C9—C6−172.2 (4)O1—Zn1—N6—Zn1ii−14.7 (5)
Zn1—O1—C9—C6−5.1 (5)N1—N2—N3—N4−2.1 (6)
C6—N5—C7—C11.2 (7)C8—C2—C1—C70.3 (9)
Zn1—N5—C7—C1178.9 (4)N5—C7—C1—C2−0.5 (9)
C7—N5—C6—C8−1.8 (6)N1—C10—N4—N3−1.0 (5)
Zn1—N5—C6—C8−179.4 (3)C11—C10—N4—N3−178.5 (4)
C7—N5—C6—C9−179.6 (4)N1—C10—N4—Zn1iii−153.6 (3)
Zn1—N5—C6—C92.8 (5)C11—C10—N4—Zn1iii28.8 (7)
C2—C8—C6—N51.6 (7)N2—N3—N4—C101.9 (5)
C5—C8—C6—N5−179.2 (5)N2—N3—N4—Zn1iii160.0 (3)
C2—C8—C6—C9179.4 (4)
D—H···AD—HH···AD···AD—H···A
C3—H3A···N2iv0.932.493.411 (8)170
C11—H11B···N8v0.972.543.252 (7)130
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C3—H3A⋯N2i0.932.493.411 (8)170
C11—H11B⋯N8ii0.972.543.252 (7)130

Symmetry codes: (i) ; (ii) .

  6 in total

1.  Novel, acentric metal-organic coordination polymers from hydrothermal reactions involving in situ ligand synthesis.

Authors:  Ren-Gen Xiong; Xiang Xue; Hong Zhao; Xiao-Zeng You; Brendan F Abrahams; Ziling Xue
Journal:  Angew Chem Int Ed Engl       Date:  2002-10-18       Impact factor: 15.336

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Syntheses, crystal structures, and luminescent properties of three novel zinc coordination polymers with tetrazolyl ligands.

Authors:  Xi-Sen Wang; Yun-Zhi Tang; Xue-Feng Huang; Zhi-Rong Qu; Chi-Ming Che; Philip Wai Hong Chan; Ren-Gen Xiong
Journal:  Inorg Chem       Date:  2005-07-25       Impact factor: 5.165

4.  1,3,5-Tris(2H-tetra-zol-5-ylmeth-oxy)-benzene.

Authors:  Hui-Zhou Luo; Heng-Yun Ye
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2007-12-06

5.  catena-Poly[[chloridocobalt(II)]-μ-5-(8-quinolyloxymeth-yl)tetra-zolato-κN,O,N:N].

Authors:  Guo-Xi Wang; Heng-Yun Ye
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-09

6.  Poly[(μ(2)-azido-κN:N)[μ(2)-5-(8-quinolyloxymeth-yl)tetra-zolato-κN,O,N:N]manganese(II)].

Authors:  Fang Chen; Heng-Yun Ye
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-23
  6 in total

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