Literature DB >> 21203043

Poly[(μ(2)-azido-κN:N)[μ(2)-5-(8-quinolyloxymeth-yl)tetra-zolato-κN,O,N:N]manganese(II)].

Fang Chen1, Heng-Yun Ye.   

Abstract

In the structure of the title compound, [Mn(C(11)H(8)N(5)O)(N(3))](n), the Mn atoms are hexa-coordinated by five N atoms and one O atom. The coordination polyhedron of the Mn atom is a slightly distorted octa-hedron. The Mn atoms are connected by azide anions with a μ(2)-1,1 mode and by 5-(8-quinolyloxymeth-yl)tetra-zolate ligands in a μ(2)-η(1)(N),η(3)-(N,N,O) fashion to form a two-dimensional framework parallel to the (100) plane. Geometric parameters of the organic ligand are in the normal ranges and the dihedral angle between the quinoline ring system and the tetra-zole unit is 7.41 (15)°. The structure involves intra- and inter-molecular C-H⋯N hydrogen bonds.

Entities:  

Year:  2008        PMID: 21203043      PMCID: PMC2961973          DOI: 10.1107/S1600536808022617

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the use of tetra­zole derivatives in coordination chemistry, see: Wang et al. (2005 ▶); Xiong et al. (2002 ▶). For the crystal structure of a tetra­zole derivative, see: Wang & Ye (2007 ▶); For the synthesis of 8-cyanato­quinoline, see: Luo & Ye (2008 ▶).

Experimental

Crystal data

[Mn(C11H8N5O)(N3)] M = 323.19 Monoclinic, a = 10.431 (2) Å b = 14.431 (3) Å c = 8.589 (2) Å β = 90.676 (18)° V = 1292.8 (5) Å3 Z = 4 Mo Kα radiation μ = 1.03 mm−1 T = 293 (2) K 0.20 × 0.16 × 0.12 mm

Data collection

Rigaku, SCXmini diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.820, T max = 0.886 13382 measured reflections 3074 independent reflections 2472 reflections with I > 2σ(I) R int = 0.054

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.105 S = 1.11 3074 reflections 190 parameters H-atom parameters constrained Δρmax = 0.32 e Å−3 Δρmin = −0.41 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808022617/rk2100sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808022617/rk2100Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Mn(C11H8N5O)(N3)]F000 = 652
Mr = 323.19Dx = 1.661 Mg m3
Monoclinic, P21/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3074 reflections
a = 10.431 (2) Åθ = 2.8–27.9º
b = 14.431 (3) ŵ = 1.03 mm1
c = 8.589 (2) ÅT = 293 (2) K
β = 90.676 (18)ºBlock, yellow
V = 1292.8 (5) Å30.20 × 0.16 × 0.12 mm
Z = 4
Rigaku, SCXmini diffractometer3074 independent reflections
Radiation source: Fine-focus sealed tube2472 reflections with I > 2σ(I)
Monochromator: GraphiteRint = 0.054
Detector resolution: 13.6612 pixels mm-1θmax = 27.9º
T = 293(2) Kθmin = 2.8º
ω scansh = −13→13
Absorption correction: multi-scan(CrystalClear; Rigaku, 2005)k = −19→19
Tmin = 0.820, Tmax = 0.886l = −11→11
13382 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.046H-atom parameters constrained
wR(F2) = 0.106  w = 1/[σ2(Fo2) + (0.0431P)2 + 0.2319P] where P = (Fo2 + 2Fc2)/3
S = 1.11(Δ/σ)max = 0.001
3074 reflectionsΔρmax = 0.32 e Å3
190 parametersΔρmin = −0.41 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: None
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R–factor wR and goodness of fit S are based on F2, conventional R–factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R–factors(gt) etc. and is not relevant to the choice of reflections for refinement. R–factors based on F2 are statistically about twice as large as those based on F, and R–factors based on ALL data will be even larger.
xyzUiso*/Ueq
Mn10.44828 (3)0.90619 (3)0.09904 (4)0.03138 (13)
C10.4312 (2)0.72913 (17)−0.1025 (3)0.0347 (6)
C20.2897 (2)0.74195 (18)−0.0956 (3)0.0361 (6)
H2A0.25480.7575−0.19740.043*
H2B0.24840.6860−0.05880.043*
C30.1497 (2)0.84401 (18)0.0504 (3)0.0369 (6)
C40.0389 (3)0.8016 (2)0.0034 (4)0.0489 (7)
H4A0.04100.7513−0.06420.059*
C5−0.0791 (3)0.8355 (2)0.0595 (5)0.0636 (9)
H5A−0.15490.80680.02800.076*
C6−0.0843 (3)0.9086 (2)0.1577 (5)0.0611 (9)
H6A−0.16310.92910.19390.073*
C70.0296 (3)0.9541 (2)0.2056 (4)0.0476 (7)
C80.0335 (3)1.0319 (2)0.3054 (4)0.0598 (9)
H8A−0.04251.05650.34290.072*
C90.1473 (3)1.0708 (2)0.3471 (4)0.0622 (9)
H9A0.14981.12130.41440.075*
C100.2607 (3)1.0341 (2)0.2875 (3)0.0506 (7)
H10A0.33801.06170.31610.061*
C110.1485 (2)0.92186 (18)0.1507 (3)0.0350 (6)
N10.4916 (2)0.66357 (15)−0.1804 (3)0.0402 (5)
N20.6184 (2)0.67775 (19)−0.1497 (3)0.0551 (7)
N30.6309 (2)0.74859 (19)−0.0569 (3)0.0569 (7)
N40.5125 (2)0.78285 (16)−0.0251 (3)0.0431 (6)
N50.2634 (2)0.96208 (15)0.1926 (2)0.0372 (5)
N60.5787 (2)1.01876 (16)0.1316 (3)0.0417 (5)
N70.6346 (2)1.04671 (15)0.2407 (3)0.0415 (5)
N80.6923 (3)1.0756 (2)0.3458 (3)0.0701 (9)
O10.27145 (16)0.81654 (12)0.0115 (2)0.0398 (4)
U11U22U33U12U13U23
Mn10.0286 (2)0.0303 (2)0.0353 (2)−0.00417 (15)0.00011 (15)0.00057 (15)
C10.0352 (14)0.0325 (13)0.0364 (13)−0.0005 (10)−0.0019 (11)−0.0022 (10)
C20.0345 (14)0.0334 (13)0.0403 (14)−0.0042 (11)−0.0015 (11)−0.0079 (11)
C30.0272 (12)0.0390 (14)0.0445 (15)0.0012 (10)0.0001 (11)0.0068 (11)
C40.0340 (15)0.0462 (17)0.067 (2)−0.0052 (12)−0.0026 (13)−0.0041 (14)
C50.0276 (15)0.061 (2)0.102 (3)−0.0051 (14)−0.0040 (16)0.004 (2)
C60.0306 (15)0.067 (2)0.086 (3)0.0049 (14)0.0069 (16)0.0028 (18)
C70.0363 (15)0.0509 (17)0.0558 (18)0.0087 (13)0.0078 (13)0.0063 (14)
C80.0510 (19)0.063 (2)0.066 (2)0.0169 (16)0.0150 (16)−0.0072 (17)
C90.057 (2)0.063 (2)0.066 (2)0.0136 (17)0.0090 (17)−0.0211 (17)
C100.0492 (18)0.0498 (18)0.0529 (18)−0.0006 (14)0.0013 (14)−0.0121 (14)
C110.0291 (13)0.0397 (14)0.0362 (14)0.0020 (10)0.0031 (10)0.0072 (10)
N10.0336 (12)0.0408 (13)0.0461 (13)0.0030 (9)−0.0019 (10)−0.0086 (10)
N20.0372 (13)0.0645 (17)0.0633 (17)0.0066 (12)−0.0057 (12)−0.0228 (13)
N30.0349 (13)0.0648 (17)0.0708 (18)0.0001 (12)−0.0065 (12)−0.0225 (14)
N40.0322 (12)0.0428 (13)0.0541 (14)0.0026 (10)−0.0034 (10)−0.0125 (11)
N50.0346 (11)0.0379 (12)0.0392 (12)0.0015 (9)0.0021 (9)−0.0013 (9)
N60.0456 (13)0.0389 (12)0.0405 (13)−0.0140 (10)−0.0067 (10)0.0060 (10)
N70.0433 (13)0.0348 (12)0.0464 (14)−0.0020 (10)0.0019 (11)0.0010 (10)
N80.083 (2)0.073 (2)0.0529 (17)−0.0068 (16)−0.0253 (16)−0.0143 (14)
O10.0290 (9)0.0403 (10)0.0501 (11)−0.0026 (8)0.0035 (8)−0.0124 (8)
Mn1—N62.135 (2)C6—C71.415 (4)
Mn1—N42.184 (2)C6—H6A0.9300
Mn1—N1i2.188 (2)C7—C111.411 (4)
Mn1—N52.247 (2)C7—C81.412 (4)
Mn1—N6ii2.272 (2)C8—C91.358 (5)
Mn1—O12.3682 (18)C8—H8A0.9300
C1—N41.322 (3)C9—C101.399 (4)
C1—N11.322 (3)C9—H9A0.9300
C1—C21.490 (4)C10—N51.322 (3)
C2—O11.430 (3)C10—H10A0.9300
C2—H2A0.9700C11—N51.376 (3)
C2—H2B0.9700N1—N21.361 (3)
C3—C41.364 (4)N1—Mn1iii2.188 (2)
C3—O11.376 (3)N2—N31.302 (3)
C3—C111.416 (4)N3—N41.361 (3)
C4—C51.414 (4)N6—N71.169 (3)
C4—H4A0.9300N6—Mn1ii2.272 (2)
C5—C61.353 (5)N7—N81.157 (3)
C5—H5A0.9300
N6—Mn1—N4119.03 (9)C7—C6—H6A119.9
N6—Mn1—N1i96.42 (8)C11—C7—C8116.5 (3)
N4—Mn1—N1i89.22 (9)C11—C7—C6119.2 (3)
N6—Mn1—N5103.19 (9)C8—C7—C6124.3 (3)
N4—Mn1—N5137.42 (8)C9—C8—C7120.5 (3)
N1i—Mn1—N591.43 (8)C9—C8—H8A119.7
N6—Mn1—N6ii79.85 (9)C7—C8—H8A119.7
N4—Mn1—N6ii89.90 (9)C8—C9—C10119.1 (3)
N1i—Mn1—N6ii175.15 (8)C8—C9—H9A120.4
N5—Mn1—N6ii92.44 (9)C10—C9—H9A120.4
N6—Mn1—O1161.79 (8)N5—C10—C9123.2 (3)
N4—Mn1—O169.03 (7)N5—C10—H10A118.4
N1i—Mn1—O1100.11 (8)C9—C10—H10A118.4
N5—Mn1—O168.97 (7)N5—C11—C7122.7 (3)
N6ii—Mn1—O184.01 (7)N5—C11—C3118.7 (2)
N4—C1—N1111.6 (2)C7—C11—C3118.6 (3)
N4—C1—C2122.5 (2)C1—N1—N2105.2 (2)
N1—C1—C2125.9 (2)C1—N1—Mn1iii132.27 (18)
O1—C2—C1104.99 (19)N2—N1—Mn1iii115.27 (17)
O1—C2—H2A110.7N3—N2—N1109.1 (2)
C1—C2—H2A110.7N2—N3—N4108.8 (2)
O1—C2—H2B110.7C1—N4—N3105.3 (2)
C1—C2—H2B110.7C1—N4—Mn1121.64 (17)
H2A—C2—H2B108.8N3—N4—Mn1132.69 (18)
C4—C3—O1125.4 (3)C10—N5—C11117.9 (2)
C4—C3—C11121.5 (2)C10—N5—Mn1121.83 (19)
O1—C3—C11113.0 (2)C11—N5—Mn1120.26 (17)
C3—C4—C5118.8 (3)N7—N6—Mn1132.73 (19)
C3—C4—H4A120.6N7—N6—Mn1ii126.11 (18)
C5—C4—H4A120.6Mn1—N6—Mn1ii100.15 (9)
C6—C5—C4121.6 (3)N8—N7—N6178.1 (3)
C6—C5—H5A119.2C3—O1—C2120.2 (2)
C4—C5—H5A119.2C3—O1—Mn1118.92 (15)
C5—C6—C7120.2 (3)C2—O1—Mn1120.41 (14)
C5—C6—H6A119.9
D—H···AD—HH···AD···AD—H···A
C2—H2B···N8iv0.972.503.223 (4)131
C5—H5A···N3v0.932.493.413 (4)173
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C2—H2B⋯N8i0.972.503.223 (4)131
C5—H5A⋯N3ii0.932.493.413 (4)173

Symmetry codes: (i) ; (ii) .

  4 in total

1.  Novel, acentric metal-organic coordination polymers from hydrothermal reactions involving in situ ligand synthesis.

Authors:  Ren-Gen Xiong; Xiang Xue; Hong Zhao; Xiao-Zeng You; Brendan F Abrahams; Ziling Xue
Journal:  Angew Chem Int Ed Engl       Date:  2002-10-18       Impact factor: 15.336

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Syntheses, crystal structures, and luminescent properties of three novel zinc coordination polymers with tetrazolyl ligands.

Authors:  Xi-Sen Wang; Yun-Zhi Tang; Xue-Feng Huang; Zhi-Rong Qu; Chi-Ming Che; Philip Wai Hong Chan; Ren-Gen Xiong
Journal:  Inorg Chem       Date:  2005-07-25       Impact factor: 5.165

4.  1,3,5-Tris(2H-tetra-zol-5-ylmeth-oxy)-benzene.

Authors:  Hui-Zhou Luo; Heng-Yun Ye
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2007-12-06
  4 in total
  1 in total

1.  Poly[(μ(2)-azido-κN:N)[μ(2)-5-(8-quinolyl-oxy-methyl)tetra-zolato-κN,O,N:N]zinc(II)].

Authors:  Hong-Ling Cai
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-05-14
  1 in total

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