Literature DB >> 21582934

2-(3-Nitro-phen-yl)-4,5-diphenyl-1H-imidazol-3-ium nitrate.

Yi Zhang1.   

Abstract

In the cation of the title compound, C(21)H(16)N(3)O(2) (+)·NO(3) (-), the N atom in the 3-position of the imidazole ring is protonated. The three pendant aromatic rings are twisted from the plane of the imidazolium ring by dihedral angles of 22.75 (1), 79.63 (1) and 29.65 (1)°. In the crystal structure, N-H⋯O hydrogen bonds link the mol-ecules, forming an infinite one-dimensional chain parallel to the b axis.

Entities:  

Year:  2009        PMID: 21582934      PMCID: PMC2969496          DOI: 10.1107/S1600536809023599

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of imidazole derivatives in coordination chemistry, see: Dai & Fu (2008 ▶); Fu et al. (2008 ▶); Huang et al. (2008 ▶).

Experimental

Crystal data

C21H16N3O2 +·NO3 M = 404.38 Monoclinic, a = 5.870 (1) Å b = 12.509 (3) Å c = 26.476 (5) Å β = 95.06 (3)° V = 1936.2 (7) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 298 K 0.45 × 0.40 × 0.25 mm

Data collection

Rigaku Mercury2 diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.949, T max = 1.000 (expected range = 0.925–0.975) 19751 measured reflections 4443 independent reflections 2546 reflections with I > 2σ(I) R int = 0.085

Refinement

R[F 2 > 2σ(F 2)] = 0.063 wR(F 2) = 0.162 S = 1.04 4443 reflections 271 parameters H-atom parameters constrained Δρmax = 0.19 e Å−3 Δρmin = −0.22 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809023599/im2120sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809023599/im2120Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H16N3O2+·NO3F(000) = 840
Mr = 404.38Dx = 1.387 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 4443 reflections
a = 5.870 (1) Åθ = 3.1–27.5°
b = 12.509 (3) ŵ = 0.10 mm1
c = 26.476 (5) ÅT = 298 K
β = 95.06 (3)°Block, colorless
V = 1936.2 (7) Å30.45 × 0.40 × 0.25 mm
Z = 4
Rigaku Mercury2 diffractometer4443 independent reflections
Radiation source: fine-focus sealed tube2546 reflections with I > 2σ(I)
graphiteRint = 0.085
Detector resolution: 13.6612 pixels mm-1θmax = 27.5°, θmin = 3.1°
CCD profile fitting scansh = −7→7
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005)k = −16→16
Tmin = 0.949, Tmax = 1.000l = −34→34
19751 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.063Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.162H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0623P)2 + 0.3275P] where P = (Fo2 + 2Fc2)/3
4443 reflections(Δ/σ)max < 0.001
271 parametersΔρmax = 0.19 e Å3
0 restraintsΔρmin = −0.22 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O30.2948 (3)0.82802 (12)0.22754 (7)0.0478 (5)
N30.5060 (4)0.84341 (19)0.22241 (8)0.0512 (6)
O20.6316 (4)0.76676 (19)0.21888 (9)0.0876 (8)
O10.5694 (4)0.93609 (19)0.22221 (11)0.0982 (9)
N20.1754 (3)0.64621 (14)0.27380 (6)0.0341 (4)
H2A0.24410.69590.25860.041*
N1−0.0446 (3)0.51473 (14)0.28709 (7)0.0354 (5)
H1A−0.14390.46450.28190.043*
C70.0303 (4)0.57674 (17)0.25109 (8)0.0332 (5)
C130.0275 (4)0.47970 (17)0.37962 (8)0.0356 (5)
C160.3635 (4)0.68723 (17)0.35972 (8)0.0347 (5)
C10.1235 (4)0.60288 (18)0.16282 (9)0.0416 (6)
H10.25480.64040.17430.050*
C180.7179 (4)0.7836 (2)0.37476 (11)0.0490 (7)
H180.84930.81180.36270.059*
C150.2004 (4)0.62735 (17)0.32540 (8)0.0337 (5)
C20.0714 (5)0.5842 (2)0.11185 (9)0.0472 (6)
C210.3271 (4)0.70151 (19)0.41038 (9)0.0440 (6)
H210.19550.67410.42270.053*
C6−0.0249 (4)0.56435 (17)0.19669 (8)0.0347 (5)
C170.5628 (4)0.72880 (18)0.34219 (9)0.0404 (6)
H170.59100.71950.30850.049*
C5−0.2202 (4)0.5095 (2)0.17802 (9)0.0474 (6)
H5−0.32150.48420.20030.057*
C140.0604 (4)0.54308 (17)0.33367 (8)0.0344 (5)
C200.4843 (5)0.7559 (2)0.44270 (10)0.0517 (7)
H200.45780.76490.47660.062*
O50.3866 (4)0.6812 (2)0.09223 (9)0.0871 (7)
C8−0.1602 (5)0.4912 (2)0.40612 (11)0.0607 (8)
H8−0.27250.54050.39530.073*
N40.2321 (5)0.6234 (2)0.07626 (10)0.0687 (7)
C190.6799 (5)0.7970 (2)0.42501 (11)0.0535 (7)
H190.78580.83350.44680.064*
C10−0.0231 (5)0.3584 (2)0.46502 (10)0.0602 (8)
H10−0.03860.31860.49420.072*
C4−0.2650 (5)0.4923 (2)0.12670 (10)0.0581 (8)
H4−0.39650.45550.11470.070*
O40.1968 (5)0.5963 (2)0.03177 (9)0.1162 (10)
C120.1888 (5)0.4055 (2)0.39616 (11)0.0652 (9)
H120.31780.39630.37860.078*
C110.1621 (6)0.3445 (3)0.43847 (11)0.0758 (10)
H110.27160.29340.44890.091*
C3−0.1176 (5)0.5290 (2)0.09306 (10)0.0557 (7)
H3−0.14590.51650.05850.067*
C9−0.1853 (5)0.4305 (3)0.44881 (11)0.0700 (9)
H9−0.31410.43920.46650.084*
U11U22U33U12U13U23
O30.0438 (10)0.0367 (9)0.0637 (12)−0.0033 (8)0.0099 (9)0.0069 (8)
N30.0560 (15)0.0527 (14)0.0477 (13)0.0027 (12)0.0209 (11)0.0054 (11)
O20.0859 (17)0.0920 (16)0.0904 (17)0.0467 (14)0.0390 (14)0.0154 (14)
O10.0733 (16)0.0666 (15)0.161 (3)−0.0267 (12)0.0439 (15)0.0050 (16)
N20.0397 (11)0.0327 (10)0.0304 (10)−0.0023 (8)0.0057 (8)0.0031 (8)
N10.0363 (10)0.0369 (10)0.0333 (11)−0.0043 (8)0.0041 (8)0.0007 (9)
C70.0347 (12)0.0315 (11)0.0335 (12)−0.0001 (10)0.0037 (10)−0.0007 (10)
C130.0411 (13)0.0350 (12)0.0310 (12)−0.0011 (10)0.0039 (10)0.0015 (10)
C160.0391 (13)0.0318 (12)0.0330 (13)0.0041 (10)0.0024 (10)0.0015 (10)
C10.0480 (14)0.0373 (13)0.0398 (14)−0.0034 (11)0.0054 (11)0.0010 (11)
C180.0384 (14)0.0482 (15)0.0594 (18)−0.0009 (11)−0.0009 (12)0.0042 (14)
C150.0374 (12)0.0338 (12)0.0303 (12)0.0027 (10)0.0047 (9)0.0006 (10)
C20.0637 (17)0.0449 (15)0.0339 (14)−0.0004 (13)0.0091 (12)0.0055 (12)
C210.0441 (14)0.0497 (15)0.0380 (14)0.0005 (11)0.0017 (11)0.0000 (12)
C60.0398 (13)0.0318 (12)0.0321 (13)0.0014 (10)0.0017 (10)0.0023 (10)
C170.0407 (14)0.0415 (13)0.0388 (13)0.0027 (11)0.0019 (11)0.0017 (11)
C50.0505 (15)0.0481 (15)0.0434 (15)−0.0081 (12)0.0027 (12)0.0024 (12)
C140.0350 (12)0.0346 (12)0.0340 (13)0.0042 (10)0.0054 (10)−0.0003 (10)
C200.0612 (18)0.0568 (17)0.0352 (14)0.0056 (14)−0.0066 (13)−0.0043 (12)
O50.0782 (16)0.115 (2)0.0699 (15)−0.0193 (15)0.0203 (13)0.0227 (14)
C80.0539 (17)0.0628 (18)0.0692 (19)0.0168 (14)0.0262 (14)0.0261 (16)
N40.092 (2)0.0691 (17)0.0481 (16)0.0050 (16)0.0231 (14)0.0119 (14)
C190.0531 (17)0.0487 (16)0.0546 (17)0.0003 (13)−0.0185 (14)−0.0015 (14)
C100.074 (2)0.0654 (19)0.0424 (16)−0.0017 (16)0.0105 (14)0.0163 (14)
C40.0692 (19)0.0573 (17)0.0449 (16)−0.0155 (14)−0.0119 (14)0.0000 (14)
O40.189 (3)0.121 (2)0.0462 (15)−0.029 (2)0.0507 (16)−0.0077 (14)
C120.0593 (18)0.087 (2)0.0529 (18)0.0242 (16)0.0230 (14)0.0262 (16)
C110.082 (2)0.089 (2)0.0580 (19)0.0300 (19)0.0143 (17)0.0364 (18)
C30.082 (2)0.0526 (16)0.0315 (14)0.0005 (15)0.0004 (13)−0.0021 (13)
C90.068 (2)0.079 (2)0.068 (2)0.0061 (17)0.0356 (16)0.0236 (18)
O3—N31.273 (3)C2—N41.475 (3)
N3—O11.218 (3)C21—C201.381 (4)
N3—O21.218 (3)C21—H210.9300
N2—C71.323 (3)C6—C51.389 (3)
N2—C151.381 (3)C17—H170.9300
N2—H2A0.8600C5—C41.378 (3)
N1—C71.333 (3)C5—H50.9300
N1—C141.376 (3)C20—C191.377 (4)
N1—H1A0.8600C20—H200.9300
C7—C61.456 (3)O5—N41.206 (3)
C13—C81.365 (3)C8—C91.380 (4)
C13—C121.370 (3)C8—H80.9300
C13—C141.479 (3)N4—O41.226 (3)
C16—C211.388 (3)C19—H190.9300
C16—C171.396 (3)C10—C91.353 (4)
C16—C151.466 (3)C10—C111.357 (4)
C1—C21.377 (3)C10—H100.9300
C1—C61.390 (3)C4—C31.374 (4)
C1—H10.9300C4—H40.9300
C18—C191.378 (4)C12—C111.376 (4)
C18—C171.380 (3)C12—H120.9300
C18—H180.9300C11—H110.9300
C15—C141.366 (3)C3—H30.9300
C2—C31.363 (4)C9—H90.9300
O1—N3—O2124.2 (3)C16—C17—H17119.9
O1—N3—O3116.4 (2)C4—C5—C6120.5 (2)
O2—N3—O3119.4 (2)C4—C5—H5119.7
C7—N2—C15110.19 (18)C6—C5—H5119.7
C7—N2—H2A124.9C15—C14—N1106.46 (19)
C15—N2—H2A124.9C15—C14—C13132.0 (2)
C7—N1—C14109.94 (18)N1—C14—C13121.24 (19)
C7—N1—H1A125.0C19—C20—C21120.3 (2)
C14—N1—H1A125.0C19—C20—H20119.8
N2—C7—N1107.27 (19)C21—C20—H20119.8
N2—C7—C6126.7 (2)C13—C8—C9120.9 (3)
N1—C7—C6125.9 (2)C13—C8—H8119.6
C8—C13—C12118.2 (2)C9—C8—H8119.6
C8—C13—C14122.4 (2)O5—N4—O4124.1 (3)
C12—C13—C14119.3 (2)O5—N4—C2118.6 (3)
C21—C16—C17118.6 (2)O4—N4—C2117.3 (3)
C21—C16—C15121.1 (2)C20—C19—C18119.6 (2)
C17—C16—C15120.3 (2)C20—C19—H19120.2
C2—C1—C6118.4 (2)C18—C19—H19120.2
C2—C1—H1120.8C9—C10—C11119.6 (3)
C6—C1—H1120.8C9—C10—H10120.2
C19—C18—C17120.6 (2)C11—C10—H10120.2
C19—C18—H18119.7C3—C4—C5120.7 (3)
C17—C18—H18119.7C3—C4—H4119.6
C14—C15—N2106.10 (19)C5—C4—H4119.6
C14—C15—C16131.6 (2)C13—C12—C11120.7 (3)
N2—C15—C16122.16 (19)C13—C12—H12119.6
C3—C2—C1123.1 (2)C11—C12—H12119.6
C3—C2—N4118.8 (2)C10—C11—C12120.3 (3)
C1—C2—N4118.1 (2)C10—C11—H11119.9
C20—C21—C16120.7 (2)C12—C11—H11119.9
C20—C21—H21119.6C2—C3—C4118.1 (2)
C16—C21—H21119.6C2—C3—H3120.9
C5—C6—C1119.1 (2)C4—C3—H3120.9
C5—C6—C7120.6 (2)C10—C9—C8120.2 (3)
C1—C6—C7120.2 (2)C10—C9—H9119.9
C18—C17—C16120.2 (2)C8—C9—H9119.9
C18—C17—H17119.9
D—H···AD—HH···AD···AD—H···A
N1—H1A···O3i0.861.932.768 (2)165
N2—H2A···O30.861.882.705 (2)160
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O3i0.861.932.768 (2)165
N2—H2A⋯O30.861.882.705 (2)160

Symmetry code: (i) .

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