Literature DB >> 21582894

2,2'-[1,1'-(Heptane-1,7-diyldioxy-dinitrilo)diethyl-idyne]di-1-naphthol.

Wen-Kui Dong1, Jian-Chao Wu, Yin-Xia Sun, Jun-Feng Tong, Shang-Sheng Gong.   

Abstract

The mol-ecule of the title compound, C(31)H(34)N(2)O(4), adopts an L-shaped configuration, in which the naphthalene units are approximately perpendicular, making a dihedral angle of 87.89 (3)°. Intramolecular H-bonds are formed between the OH substituents and the N atoms at each end of the molecule. In the crystal structure, each mol-ecule links six other mol-ecules into an infinite three-dimensional network supra-molecular structure, which is built from one-dimensional zigzag chains via weak C-H⋯π stacking and inter-molecular C-H⋯O hydrogen bonds.

Entities:  

Year:  2009        PMID: 21582894      PMCID: PMC2969467          DOI: 10.1107/S1600536809022727

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the potential medical applications of Schiff base compounds, see: Huang et al. (2002 ▶). For the properties of Salen-type bis­oxime compounds, see: Darensbourg et al. (2004 ▶); Dong et al. (2008a ▶,b ▶); Karthikeyan et al. (2006 ▶); Zhang et al. (2007 ▶).

Experimental

Crystal data

C31H34N2O4 M = 498.60 Monoclinic, a = 11.1670 (12) Å b = 30.992 (3) Å c = 8.0562 (10) Å β = 106.999 (2)° V = 2666.4 (5) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 298 K 0.43 × 0.18 × 0.16 mm

Data collection

Bruker SMART 1000 CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.966, T max = 0.987 6926 measured reflections 2351 independent reflections 1294 reflections with I > 2σ(I) R int = 0.055

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.120 S = 1.04 2351 reflections 334 parameters 2 restraints H-atom parameters constrained Δρmax = 0.13 e Å−3 Δρmin = −0.15 e Å−3 Data collection: SMART (Bruker, 1996 ▶); cell refinement: SAINT (Bruker, 1996 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809022727/at2813sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809022727/at2813Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C31H34N2O4F(000) = 1064
Mr = 498.60Dx = 1.242 Mg m3
Monoclinic, CcMo Kα radiation, λ = 0.71073 Å
Hall symbol: C -2ycCell parameters from 1335 reflections
a = 11.1670 (12) Åθ = 2.6–20.4°
b = 30.992 (3) ŵ = 0.08 mm1
c = 8.0562 (10) ÅT = 298 K
β = 106.999 (2)°Needle-shaped, colourless
V = 2666.4 (5) Å30.43 × 0.18 × 0.16 mm
Z = 4
Bruker SMART 1000 CCD area-detector diffractometer2351 independent reflections
Radiation source: fine-focus sealed tube1294 reflections with I > 2σ(I)
graphiteRint = 0.055
φ and ω scansθmax = 25.0°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −13→12
Tmin = 0.966, Tmax = 0.987k = −36→26
6926 measured reflectionsl = −9→9
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.120H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0485P)2] where P = (Fo2 + 2Fc2)/3
2351 reflections(Δ/σ)max < 0.001
334 parametersΔρmax = 0.13 e Å3
2 restraintsΔρmin = −0.15 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.5072 (4)−0.01344 (13)0.4193 (6)0.0563 (12)
N20.3241 (4)0.34282 (14)0.1038 (7)0.0672 (14)
O10.5541 (3)0.02813 (10)0.4627 (5)0.0638 (11)
O20.2551 (4)0.33008 (11)0.2159 (6)0.0829 (14)
O30.3391 (3)−0.06591 (10)0.2602 (5)0.0653 (11)
H30.3708−0.04220.28930.098*
O40.4023 (4)0.32932 (10)−0.1543 (6)0.0712 (12)
H40.36720.3234−0.08090.107*
C10.4564 (5)0.05779 (15)0.3800 (8)0.0613 (15)
H1A0.38400.05290.42100.074*
H1B0.43140.05330.25540.074*
C20.5032 (5)0.10340 (15)0.4216 (8)0.0545 (14)
H2A0.57810.10780.38580.065*
H2B0.52450.10830.54580.065*
C30.4027 (5)0.13488 (14)0.3276 (8)0.0603 (15)
H3A0.38480.13000.20380.072*
H3B0.32690.12850.35850.072*
C40.4333 (5)0.18204 (15)0.3637 (8)0.0581 (15)
H4A0.45310.18720.48750.070*
H4B0.50680.18920.32830.070*
C50.3270 (5)0.21085 (15)0.2698 (7)0.0617 (16)
H5A0.25500.20400.30930.074*
H5B0.30490.20410.14700.074*
C60.3514 (6)0.25888 (16)0.2920 (9)0.0715 (17)
H6A0.37620.26600.41450.086*
H6B0.41970.26660.24600.086*
C70.2364 (6)0.28434 (16)0.1993 (10)0.079 (2)
H7A0.21160.27680.07720.095*
H7B0.16850.27640.24560.095*
C80.7100 (5)−0.03440 (16)0.6125 (9)0.081 (2)
H8A0.7385−0.00710.58240.121*
H8B0.7672−0.05670.60220.121*
H8C0.7061−0.03330.72990.121*
C90.5832 (5)−0.04386 (16)0.4933 (7)0.0504 (13)
C100.4203 (4)−0.09722 (15)0.3404 (7)0.0473 (13)
C110.5372 (4)−0.08821 (15)0.4514 (7)0.0477 (14)
C120.6146 (5)−0.12319 (17)0.5284 (8)0.0590 (15)
H120.6940−0.11780.60330.071*
C130.5745 (5)−0.16512 (16)0.4945 (8)0.0606 (16)
H130.6272−0.18760.54640.073*
C140.4557 (5)−0.17435 (15)0.3833 (7)0.0503 (14)
C150.3764 (4)−0.14046 (15)0.3028 (7)0.0473 (13)
C160.2572 (5)−0.14951 (17)0.1906 (8)0.0631 (15)
H160.2050−0.12710.13600.076*
C170.2182 (6)−0.1910 (2)0.1617 (9)0.0742 (18)
H170.1383−0.19690.08930.089*
C180.2957 (6)−0.22464 (19)0.2384 (9)0.078 (2)
H180.2672−0.25290.21620.093*
C190.4118 (6)−0.21739 (15)0.3449 (8)0.0645 (16)
H190.4632−0.24050.39330.077*
C200.3147 (5)0.41367 (17)0.2330 (8)0.0735 (18)
H20A0.26080.43560.16630.110*
H20B0.38810.42690.30900.110*
H20C0.27100.39810.30050.110*
C210.3522 (4)0.38312 (17)0.1130 (8)0.0563 (15)
C220.4417 (5)0.37085 (14)−0.1341 (8)0.0536 (15)
C230.4214 (5)0.39749 (16)−0.0081 (8)0.0568 (15)
C240.4688 (5)0.44061 (15)0.0014 (9)0.0667 (17)
H240.45550.45920.08500.080*
C250.5314 (5)0.45511 (19)−0.1051 (9)0.0721 (19)
H250.56200.4832−0.09310.087*
C260.5518 (5)0.4283 (2)−0.2361 (9)0.0665 (16)
C270.5071 (4)0.38519 (17)−0.2497 (8)0.0561 (15)
C280.5259 (5)0.35823 (19)−0.3813 (9)0.0729 (17)
H280.49460.3302−0.39310.088*
C290.5895 (6)0.3728 (2)−0.4915 (10)0.084 (2)
H290.60240.3548−0.57690.101*
C300.6349 (5)0.4149 (3)−0.4751 (10)0.086 (2)
H300.67870.4246−0.54990.103*
C310.6171 (5)0.4419 (2)−0.3538 (10)0.077 (2)
H310.64810.4699−0.34690.093*
U11U22U33U12U13U23
N10.062 (3)0.038 (3)0.063 (3)−0.003 (2)0.008 (2)0.002 (2)
N20.073 (3)0.042 (3)0.087 (4)0.006 (2)0.025 (3)0.009 (3)
O10.060 (2)0.038 (2)0.084 (3)0.0017 (17)0.007 (2)0.0032 (19)
O20.101 (3)0.043 (3)0.120 (4)0.012 (2)0.056 (3)0.015 (2)
O30.059 (2)0.045 (2)0.080 (3)0.0047 (18)0.002 (2)0.0083 (19)
O40.083 (3)0.040 (2)0.087 (3)−0.004 (2)0.021 (2)−0.004 (2)
C10.066 (3)0.044 (3)0.070 (4)0.010 (3)0.014 (3)0.004 (3)
C20.062 (3)0.039 (3)0.059 (4)0.000 (2)0.012 (3)−0.001 (3)
C30.071 (4)0.039 (3)0.066 (4)−0.001 (3)0.013 (3)0.002 (3)
C40.068 (3)0.042 (3)0.065 (4)−0.006 (3)0.020 (3)0.000 (3)
C50.069 (3)0.047 (3)0.069 (5)0.003 (3)0.018 (3)0.002 (3)
C60.089 (4)0.042 (3)0.085 (5)0.002 (3)0.027 (4)0.006 (3)
C70.085 (4)0.042 (3)0.119 (6)0.007 (3)0.043 (4)0.012 (4)
C80.064 (4)0.054 (4)0.101 (6)−0.001 (3)−0.013 (4)0.002 (3)
C90.050 (3)0.044 (3)0.054 (4)0.000 (3)0.011 (3)0.004 (3)
C100.049 (3)0.045 (3)0.048 (4)0.008 (2)0.014 (3)0.006 (3)
C110.044 (3)0.037 (3)0.061 (4)0.004 (2)0.014 (3)0.003 (3)
C120.053 (3)0.047 (3)0.070 (4)0.005 (3)0.006 (3)0.001 (3)
C130.064 (4)0.047 (4)0.069 (4)0.018 (3)0.016 (3)0.004 (3)
C140.058 (3)0.041 (3)0.052 (4)0.001 (3)0.017 (3)−0.001 (3)
C150.049 (3)0.044 (3)0.050 (4)0.001 (3)0.015 (3)0.002 (3)
C160.058 (3)0.052 (3)0.075 (4)−0.005 (3)0.013 (3)−0.003 (3)
C170.069 (4)0.063 (4)0.080 (5)−0.018 (3)0.005 (4)−0.009 (4)
C180.097 (5)0.048 (4)0.089 (6)−0.017 (3)0.028 (5)−0.013 (4)
C190.088 (4)0.039 (3)0.066 (5)0.004 (3)0.022 (4)0.002 (3)
C200.079 (4)0.055 (4)0.082 (5)0.017 (3)0.015 (4)−0.003 (3)
C210.054 (3)0.040 (3)0.066 (4)0.012 (2)0.002 (3)0.007 (3)
C220.053 (3)0.034 (3)0.064 (4)0.007 (2)0.001 (3)0.004 (3)
C230.055 (3)0.037 (3)0.069 (4)0.005 (2)0.004 (3)0.002 (3)
C240.075 (4)0.035 (3)0.077 (5)0.000 (3)0.001 (4)−0.007 (3)
C250.076 (4)0.046 (4)0.086 (6)−0.013 (3)0.010 (4)0.004 (4)
C260.054 (3)0.066 (4)0.070 (5)−0.001 (3)0.002 (3)0.020 (3)
C270.046 (3)0.051 (4)0.061 (4)0.006 (3)0.000 (3)0.004 (3)
C280.066 (4)0.072 (4)0.073 (5)0.013 (3)0.009 (4)0.002 (4)
C290.069 (4)0.094 (6)0.083 (6)0.014 (4)0.013 (4)0.003 (4)
C300.060 (4)0.105 (6)0.090 (6)0.016 (4)0.018 (4)0.031 (5)
C310.059 (4)0.082 (5)0.084 (6)0.002 (3)0.010 (4)0.008 (4)
N1—C91.292 (6)C11—C121.412 (7)
N1—O11.396 (5)C12—C131.376 (7)
N2—C211.285 (6)C12—H120.9300
N2—O21.404 (6)C13—C141.396 (7)
O1—C11.433 (6)C13—H130.9300
O2—C71.433 (6)C14—C151.405 (6)
O3—C101.356 (5)C14—C191.424 (7)
O3—H30.8200C15—C161.401 (7)
O4—C221.355 (5)C16—C171.357 (7)
O4—H40.8200C16—H160.9300
C1—C21.511 (6)C17—C181.379 (8)
C1—H1A0.9700C17—H170.9300
C1—H1B0.9700C18—C191.348 (9)
C2—C31.513 (7)C18—H180.9300
C2—H2A0.9700C19—H190.9300
C2—H2B0.9700C20—C211.498 (7)
C3—C41.510 (6)C20—H20A0.9600
C3—H3A0.9700C20—H20B0.9600
C3—H3B0.9700C20—H20C0.9600
C4—C51.501 (7)C21—C231.479 (7)
C4—H4A0.9700C22—C231.378 (7)
C4—H4B0.9700C22—C271.412 (7)
C5—C61.515 (7)C23—C241.431 (6)
C5—H5A0.9700C24—C251.333 (8)
C5—H5B0.9700C24—H240.9300
C6—C71.506 (8)C25—C261.414 (8)
C6—H6A0.9700C25—H250.9300
C6—H6B0.9700C26—C271.418 (7)
C7—H7A0.9700C26—C311.420 (8)
C7—H7B0.9700C27—C281.413 (8)
C8—C91.489 (7)C28—C291.366 (8)
C8—H8A0.9600C28—H280.9300
C8—H8B0.9600C29—C301.390 (8)
C8—H8C0.9600C29—H290.9300
C9—C111.472 (6)C30—C311.345 (9)
C10—C111.377 (6)C30—H300.9300
C10—C151.429 (6)C31—H310.9300
C9—N1—O1114.2 (4)C13—C12—C11121.1 (5)
C21—N2—O2114.0 (4)C13—C12—H12119.5
N1—O1—C1107.2 (4)C11—C12—H12119.5
N2—O2—C7108.1 (4)C12—C13—C14120.9 (5)
C10—O3—H3109.5C12—C13—H13119.5
C22—O4—H4109.5C14—C13—H13119.5
O1—C1—C2109.3 (4)C13—C14—C15119.7 (4)
O1—C1—H1A109.8C13—C14—C19122.3 (5)
C2—C1—H1A109.8C15—C14—C19118.0 (5)
O1—C1—H1B109.8C16—C15—C14120.0 (4)
C2—C1—H1B109.8C16—C15—C10121.8 (4)
H1A—C1—H1B108.3C14—C15—C10118.2 (4)
C1—C2—C3109.5 (4)C17—C16—C15119.8 (5)
C1—C2—H2A109.8C17—C16—H16120.1
C3—C2—H2A109.8C15—C16—H16120.1
C1—C2—H2B109.8C16—C17—C18120.8 (6)
C3—C2—H2B109.8C16—C17—H17119.6
H2A—C2—H2B108.2C18—C17—H17119.6
C4—C3—C2115.8 (4)C19—C18—C17121.3 (5)
C4—C3—H3A108.3C19—C18—H18119.3
C2—C3—H3A108.3C17—C18—H18119.3
C4—C3—H3B108.3C18—C19—C14120.1 (5)
C2—C3—H3B108.3C18—C19—H19120.0
H3A—C3—H3B107.4C14—C19—H19120.0
C5—C4—C3112.2 (4)C21—C20—H20A109.5
C5—C4—H4A109.2C21—C20—H20B109.5
C3—C4—H4A109.2H20A—C20—H20B109.5
C5—C4—H4B109.2C21—C20—H20C109.5
C3—C4—H4B109.2H20A—C20—H20C109.5
H4A—C4—H4B107.9H20B—C20—H20C109.5
C4—C5—C6115.9 (5)N2—C21—C23114.9 (5)
C4—C5—H5A108.3N2—C21—C20122.8 (5)
C6—C5—H5A108.3C23—C21—C20122.3 (5)
C4—C5—H5B108.3O4—C22—C23122.7 (5)
C6—C5—H5B108.3O4—C22—C27115.6 (5)
H5A—C5—H5B107.4C23—C22—C27121.7 (5)
C7—C6—C5111.0 (5)C22—C23—C24117.4 (5)
C7—C6—H6A109.4C22—C23—C21122.4 (5)
C5—C6—H6A109.4C24—C23—C21120.2 (5)
C7—C6—H6B109.4C25—C24—C23122.4 (6)
C5—C6—H6B109.4C25—C24—H24118.8
H6A—C6—H6B108.0C23—C24—H24118.8
O2—C7—C6113.1 (5)C24—C25—C26120.7 (6)
O2—C7—H7A109.0C24—C25—H25119.6
C6—C7—H7A109.0C26—C25—H25119.6
O2—C7—H7B109.0C25—C26—C27118.8 (6)
C6—C7—H7B109.0C25—C26—C31123.3 (6)
H7A—C7—H7B107.8C27—C26—C31117.8 (7)
C9—C8—H8A109.5C22—C27—C28121.8 (5)
C9—C8—H8B109.5C22—C27—C26118.9 (6)
H8A—C8—H8B109.5C28—C27—C26119.2 (6)
C9—C8—H8C109.5C29—C28—C27120.8 (6)
H8A—C8—H8C109.5C29—C28—H28119.6
H8B—C8—H8C109.5C27—C28—H28119.6
N1—C9—C11115.9 (4)C28—C29—C30119.5 (7)
N1—C9—C8121.8 (5)C28—C29—H29120.2
C11—C9—C8122.3 (4)C30—C29—H29120.2
O3—C10—C11122.6 (4)C31—C30—C29121.7 (7)
O3—C10—C15115.4 (4)C31—C30—H30119.1
C11—C10—C15122.0 (4)C29—C30—H30119.1
C10—C11—C12118.1 (4)C30—C31—C26120.9 (7)
C10—C11—C9122.6 (4)C30—C31—H31119.5
C12—C11—C9119.2 (4)C26—C31—H31119.5
C9—N1—O1—C1−176.2 (5)C15—C16—C17—C18−1.5 (10)
C21—N2—O2—C7−176.8 (5)C16—C17—C18—C190.4 (11)
N1—O1—C1—C2−179.4 (4)C17—C18—C19—C141.4 (10)
O1—C1—C2—C3177.3 (5)C13—C14—C19—C18179.1 (6)
C1—C2—C3—C4177.0 (5)C15—C14—C19—C18−2.0 (8)
C2—C3—C4—C5−178.1 (5)O2—N2—C21—C23−178.1 (4)
C3—C4—C5—C6−177.4 (5)O2—N2—C21—C200.0 (7)
C4—C5—C6—C7−177.3 (5)O4—C22—C23—C24179.3 (4)
N2—O2—C7—C676.5 (7)C27—C22—C23—C240.2 (7)
C5—C6—C7—O2−179.8 (5)O4—C22—C23—C21−1.4 (8)
O1—N1—C9—C11179.8 (4)C27—C22—C23—C21179.5 (4)
O1—N1—C9—C8−0.7 (7)N2—C21—C23—C226.9 (7)
O3—C10—C11—C12180.0 (5)C20—C21—C23—C22−171.2 (5)
C15—C10—C11—C120.3 (8)N2—C21—C23—C24−173.8 (5)
O3—C10—C11—C90.5 (8)C20—C21—C23—C248.0 (7)
C15—C10—C11—C9−179.2 (5)C22—C23—C24—C25−0.5 (7)
N1—C9—C11—C10−0.1 (8)C21—C23—C24—C25−179.8 (5)
C8—C9—C11—C10−179.6 (6)C23—C24—C25—C261.2 (9)
N1—C9—C11—C12−179.5 (5)C24—C25—C26—C27−1.5 (8)
C8—C9—C11—C121.0 (8)C24—C25—C26—C31179.7 (5)
C10—C11—C12—C13−0.3 (8)O4—C22—C27—C282.2 (7)
C9—C11—C12—C13179.2 (5)C23—C22—C27—C28−178.7 (5)
C11—C12—C13—C14−0.2 (9)O4—C22—C27—C26−179.7 (4)
C12—C13—C14—C150.8 (8)C23—C22—C27—C26−0.6 (7)
C12—C13—C14—C19179.7 (5)C25—C26—C27—C221.2 (7)
C13—C14—C15—C16179.8 (6)C31—C26—C27—C22−179.9 (5)
C19—C14—C15—C160.9 (7)C25—C26—C27—C28179.4 (5)
C13—C14—C15—C10−0.8 (7)C31—C26—C27—C28−1.8 (7)
C19—C14—C15—C10−179.8 (5)C22—C27—C28—C29−180.0 (5)
O3—C10—C15—C16−0.1 (7)C26—C27—C28—C291.9 (8)
C11—C10—C15—C16179.7 (5)C27—C28—C29—C30−0.8 (9)
O3—C10—C15—C14−179.4 (4)C28—C29—C30—C31−0.5 (10)
C11—C10—C15—C140.3 (7)C29—C30—C31—C260.6 (9)
C14—C15—C16—C170.8 (8)C25—C26—C31—C30179.4 (6)
C10—C15—C16—C17−178.5 (6)C27—C26—C31—C300.6 (8)
D—H···AD—HH···AD···AD—H···A
O3—H3···N10.821.812.530 (5)146
O4—H4···N20.821.802.514 (7)145
C30—H30···O3i0.932.693.598 (8)165
C20—H20A···O1ii0.962.663.572 (7)159
C29—H29···Cg1iii0.933.404.161 (1)141
C20—H20B···Cg2iv0.963.544.203 (1)128
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3⋯N10.821.812.530 (5)146
O4—H4⋯N20.821.802.514 (7)145
C30—H30⋯O3i0.932.693.598 (8)165
C20—H20A⋯O1ii0.962.663.572 (7)159
C29—H29⋯Cg1iii0.933.404.161 (1)141
C20—H20BCg2iv0.963.544.203 (1)128

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) . Cg1 and Cg2 are centroids of the C10–C15 and C14–C19 rings.

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Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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