Literature DB >> 21582735

Diaqua-bis(tetra-zolo[1,5-a]pyridine-8-carboxyl-ato-κN,O)manganese(II) dihydrate.

Jian-De Zhao1.   

Abstract

In the title compound, [Mn(C(6)H(3)N(4)O(2))(2)(H(2)O)(2)]·2H(2)O, the Mn(II) atom is located on a twofold rotation axis and is octa-hedrally coordinated by the N and O atoms of the chelating tetra-zolo[1,5-a]pyridine-8-carboxyl-ate anions and the O atoms of two water mol-ecules. Hydrogen bonds of the O-H⋯O and O-H⋯N types lead to the formation of layers parallel to (100).

Entities:  

Year:  2009        PMID: 21582735      PMCID: PMC2969418          DOI: 10.1107/S1600536809023253

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to coordination compounds, see: Kulynych & Shimizu (2002 ▶); Liu et al. (2001 ▶); Xue & Liu (2009 ▶).

Experimental

Crystal data

[Mn(C6H3N4O2)2(H2O)2]·2H2O M = 453.25 Orthorhombic, a = 19.041 (4) Å b = 11.694 (2) Å c = 7.5371 (15) Å V = 1678.3 (6) Å3 Z = 4 Mo Kα radiation μ = 0.85 mm−1 T = 293 K 0.5 × 0.5 × 0.5 mm

Data collection

Rigaku SCXmini diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.60, T max = 0.662 16422 measured reflections 1925 independent reflections 1755 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.081 S = 1.20 1925 reflections 132 parameters H-atom parameters constrained Δρmax = 0.26 e Å−3 Δρmin = −0.34 e Å−3 Data collection: SCXmini (Rigaku, 2006 ▶); cell refinement: PROCESS-AUTO (Rigaku, 1998 ▶); data reduction: PROCESS-AUTO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPIII (Burnett & Johnson, 1996 ▶), ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809023253/dn2463sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809023253/dn2463Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Mn(C6H3N4O2)2(H2O)2]·2H2OF(000) = 924
Mr = 453.25Dx = 1.794 Mg m3
Orthorhombic, PnnaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2a 2bcCell parameters from 15650 reflections
a = 19.041 (4) Åθ = 3.2–27.9°
b = 11.694 (2) ŵ = 0.85 mm1
c = 7.5371 (15) ÅT = 293 K
V = 1678.3 (6) Å3Block, yellow
Z = 40.5 × 0.5 × 0.5 mm
Rigaku SCXmini diffractometer1925 independent reflections
Radiation source: fine-focus sealed tube1755 reflections with I > 2σ(I)
graphiteRint = 0.029
ω scansθmax = 27.5°, θmin = 3.2°
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)h = −24→24
Tmin = 0.60, Tmax = 0.662k = −15→15
16422 measured reflectionsl = −9→9
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.032Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.081H-atom parameters constrained
S = 1.20w = 1/[σ2(Fo2) + (0.0386P)2 + 0.6168P] where P = (Fo2 + 2Fc2)/3
1925 reflections(Δ/σ)max = 0.001
132 parametersΔρmax = 0.26 e Å3
0 restraintsΔρmin = −0.34 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Mn10.25000.00000.86700 (4)0.01925 (12)
O10.19724 (6)0.09901 (10)0.66846 (16)0.0263 (3)
O1W0.21023 (6)0.11467 (10)1.06874 (17)0.0294 (3)
H110.18880.17461.03590.044*
H120.23510.12701.15990.044*
O20.12016 (6)0.21215 (10)0.53402 (17)0.0306 (3)
N10.14757 (7)−0.09265 (11)0.85974 (18)0.0233 (3)
N20.12692 (8)−0.18779 (12)0.9450 (2)0.0279 (3)
N30.05962 (8)−0.20081 (12)0.9411 (2)0.0285 (3)
N40.03454 (7)−0.10924 (11)0.84998 (17)0.0212 (3)
C10.13563 (9)0.13028 (13)0.6301 (2)0.0201 (3)
C20.07619 (8)0.05909 (13)0.7039 (2)0.0194 (3)
C30.00732 (9)0.08539 (14)0.6756 (2)0.0244 (3)
H3−0.00360.15280.61610.029*
C4−0.04836 (9)0.01396 (14)0.7335 (2)0.0276 (4)
H4−0.09460.03550.71220.033*
C5−0.03481 (9)−0.08466 (15)0.8190 (2)0.0261 (4)
H5−0.0706−0.13360.85510.031*
C60.08933 (8)−0.04294 (13)0.7994 (2)0.0185 (3)
O2W0.28824 (7)0.12927 (11)0.37555 (17)0.0354 (3)
H210.25900.11320.46350.053*
H220.31030.17910.40790.053*
U11U22U33U12U13U23
Mn10.01548 (18)0.02138 (19)0.02089 (19)0.00086 (12)0.0000.000
O10.0199 (6)0.0302 (6)0.0287 (6)−0.0007 (5)−0.0003 (5)0.0108 (5)
O1W0.0325 (7)0.0280 (6)0.0277 (6)0.0091 (5)−0.0033 (5)−0.0048 (5)
O20.0297 (6)0.0260 (6)0.0362 (7)−0.0035 (5)−0.0053 (6)0.0141 (5)
N10.0222 (7)0.0181 (6)0.0295 (7)−0.0005 (5)−0.0016 (5)0.0066 (5)
N20.0295 (7)0.0215 (7)0.0326 (8)−0.0017 (6)0.0003 (6)0.0083 (6)
N30.0312 (8)0.0219 (7)0.0324 (8)−0.0038 (6)0.0002 (6)0.0079 (6)
N40.0215 (7)0.0194 (6)0.0226 (7)−0.0044 (5)0.0011 (5)0.0018 (5)
C10.0230 (8)0.0190 (7)0.0185 (7)−0.0021 (6)−0.0002 (6)0.0016 (6)
C20.0224 (8)0.0175 (7)0.0183 (7)−0.0011 (6)0.0004 (6)0.0007 (6)
C30.0248 (8)0.0245 (8)0.0239 (8)0.0018 (6)−0.0025 (6)0.0016 (6)
C40.0171 (7)0.0369 (9)0.0289 (9)0.0015 (7)−0.0009 (7)−0.0018 (7)
C50.0178 (8)0.0326 (9)0.0279 (8)−0.0068 (7)0.0027 (7)−0.0021 (7)
C60.0177 (7)0.0187 (7)0.0190 (7)−0.0023 (6)0.0001 (6)−0.0003 (6)
O2W0.0383 (8)0.0386 (7)0.0293 (7)−0.0081 (6)0.0032 (5)−0.0043 (5)
Mn1—O12.1422 (12)N3—N41.3588 (19)
Mn1—O1i2.1422 (12)N4—C61.3546 (19)
Mn1—O1W2.1642 (12)N4—C51.372 (2)
Mn1—O1Wi2.1642 (12)C1—C21.511 (2)
Mn1—N12.2317 (14)C2—C31.364 (2)
Mn1—N1i2.2317 (14)C2—C61.416 (2)
O1—C11.262 (2)C3—C41.418 (2)
O1W—H110.8477C3—H30.9300
O1W—H120.8471C4—C51.346 (2)
O2—C11.2362 (19)C4—H40.9300
N1—C61.332 (2)C5—H50.9300
N1—N21.3438 (19)O2W—H210.8853
N2—N31.291 (2)O2W—H220.7585
O1—Mn1—O1i91.38 (7)N2—N3—N4105.51 (12)
O1—Mn1—O1W89.53 (5)C6—N4—N3108.82 (13)
O1i—Mn1—O1W171.80 (5)C6—N4—C5125.01 (14)
O1—Mn1—O1Wi171.80 (5)N3—N4—C5126.13 (14)
O1i—Mn1—O1Wi89.53 (5)O2—C1—O1125.44 (15)
O1W—Mn1—O1Wi90.73 (7)O2—C1—C2117.64 (14)
O1—Mn1—N180.53 (5)O1—C1—C2116.89 (13)
O1i—Mn1—N197.49 (5)C3—C2—C6116.08 (14)
O1W—Mn1—N190.70 (5)C3—C2—C1122.57 (14)
O1Wi—Mn1—N191.27 (5)C6—C2—C1121.27 (14)
O1—Mn1—N1i97.49 (5)C2—C3—C4122.53 (15)
O1i—Mn1—N1i80.53 (5)C2—C3—H3118.7
O1W—Mn1—N1i91.27 (5)C4—C3—H3118.7
O1Wi—Mn1—N1i90.70 (5)C5—C4—C3120.56 (16)
N1—Mn1—N1i177.19 (7)C5—C4—H4119.7
C1—O1—Mn1138.78 (10)C3—C4—H4119.7
Mn1—O1W—H11118.4C4—C5—N4116.47 (15)
Mn1—O1W—H12118.7C4—C5—H5121.8
H11—O1W—H12111.4N4—C5—H5121.8
C6—N1—N2106.31 (13)N1—C6—N4107.18 (13)
C6—N1—Mn1121.61 (10)N1—C6—C2133.50 (14)
N2—N1—Mn1130.24 (11)N4—C6—C2119.29 (14)
N3—N2—N1112.16 (13)H21—O2W—H22105.7
D—H···AD—HH···AD···AD—H···A
O1W—H11···O2ii0.851.932.7644 (17)166
O1W—H12···O2Wiii0.851.912.7538 (19)171
O2W—H21···O10.891.952.8287 (18)172
O2W—H22···N2iv0.762.253.003 (2)169
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H11⋯O2i0.851.932.7644 (17)166
O1W—H12⋯O2Wii0.851.912.7538 (19)171
O2W—H21⋯O10.891.952.8287 (18)172
O2W—H22⋯N2iii0.762.253.003 (2)169

Symmetry codes: (i) ; (ii) ; (iii) .

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3.  Diaqua-bis(tetra-zolo[1,5-a]pyridine-8-carboxyl-ato-κN,O)cobalt(II) dihydrate.

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