| Literature DB >> 21582715 |
Yun-Yun Wang1, Rui-Ding Hu, Wen-Zhong Zhu, Qiu-Yue Lin.
Abstract
In the crystal structure of the title compound, [Ni(C(8)H(8)O(5))(H(2)O)(2)](n), the Ni(II) cation is in a Jahn-Teller-distorted octahedral coordination environment binding to two O atoms from water molecules, the bridging O atom of the bicycloheptane unit, two carboxylate O atoms from different carboxylate groups and one carboxylate O atom from a symmetry-related bridging ligand. The crystal structure is made up from layers propagating parallel to the bc plane.Entities:
Year: 2009 PMID: 21582715 PMCID: PMC2969288 DOI: 10.1107/S1600536809021771
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Ni(C8H8O5)(H2O)2] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 4375 reflections |
| θ = 2.0–27.5° | |
| µ = 2.01 mm−1 | |
| β = 107.351 (1)° | Block, green |
| 0.27 × 0.20 × 0.10 mm | |
| Bruker APEXII area-detector diffractometer | 2213 independent reflections |
| Radiation source: fine-focus sealed tube | 1961 reflections with |
| graphite | |
| ω scans | θmax = 27.5°, θmin = 2.0° |
| Absorption correction: multi-scan ( | |
| 7972 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2213 reflections | (Δ/σ)max = 0.001 |
| 157 parameters | Δρmax = 0.30 e Å−3 |
| 6 restraints | Δρmin = −0.30 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.73787 (15) | −0.1019 (2) | 0.71021 (15) | 0.0214 (3) | |
| H1A | 0.7710 | −0.2053 | 0.7005 | 0.026* | |
| C2 | 0.75289 (16) | 0.0067 (2) | 0.60404 (16) | 0.0234 (3) | |
| H2A | 0.6816 | 0.0008 | 0.5240 | 0.028* | |
| C3 | 0.88388 (17) | −0.0131 (2) | 0.58426 (19) | 0.0329 (4) | |
| H3A | 0.8888 | 0.0402 | 0.5072 | 0.039* | |
| H3B | 0.9048 | −0.1216 | 0.5789 | 0.039* | |
| C4 | 0.97214 (18) | 0.0632 (3) | 0.7078 (2) | 0.0375 (5) | |
| H4A | 1.0324 | −0.0110 | 0.7599 | 0.045* | |
| H4B | 1.0192 | 0.1498 | 0.6872 | 0.045* | |
| C5 | 0.87589 (15) | 0.1175 (2) | 0.77610 (17) | 0.0265 (4) | |
| H5A | 0.9073 | 0.2034 | 0.8363 | 0.032* | |
| C6 | 0.82547 (16) | −0.0207 (2) | 0.83620 (16) | 0.0234 (3) | |
| H6A | 0.8966 | −0.0891 | 0.8805 | 0.028* | |
| C7 | 0.59962 (14) | −0.1119 (2) | 0.71114 (15) | 0.0202 (3) | |
| C8 | 0.75095 (16) | 0.0292 (2) | 0.92900 (15) | 0.0242 (4) | |
| O1W | 0.69190 (12) | 0.44064 (15) | 0.74994 (13) | 0.0289 (3) | |
| H1WA | 0.711 (2) | 0.473 (3) | 0.6846 (18) | 0.043* | |
| H1WB | 0.643 (2) | 0.505 (2) | 0.765 (2) | 0.043* | |
| O1 | 0.56501 (12) | −0.23749 (14) | 0.74852 (12) | 0.0244 (3) | |
| O2W | 0.51314 (14) | 0.29376 (19) | 0.53124 (13) | 0.0383 (3) | |
| H2WA | 0.557 (2) | 0.322 (3) | 0.486 (2) | 0.057* | |
| H2WB | 0.4472 (17) | 0.342 (3) | 0.512 (2) | 0.057* | |
| O2 | 0.75780 (15) | −0.05131 (17) | 1.02529 (12) | 0.0389 (3) | |
| O3 | 0.52811 (11) | 0.00446 (14) | 0.67765 (13) | 0.0272 (3) | |
| O4 | 0.68270 (12) | 0.15134 (16) | 0.89954 (11) | 0.0302 (3) | |
| O5 | 0.76514 (11) | 0.15762 (14) | 0.66735 (11) | 0.0236 (3) | |
| Ni1 | 0.601796 (19) | 0.22532 (2) | 0.714683 (19) | 0.01937 (8) |
| C1 | 0.0213 (8) | 0.0212 (8) | 0.0245 (8) | 0.0010 (6) | 0.0109 (6) | −0.0017 (6) |
| C2 | 0.0216 (8) | 0.0296 (9) | 0.0221 (8) | −0.0007 (7) | 0.0111 (6) | −0.0032 (7) |
| C3 | 0.0287 (9) | 0.0413 (11) | 0.0364 (10) | 0.0019 (8) | 0.0217 (8) | −0.0008 (8) |
| C4 | 0.0218 (9) | 0.0503 (13) | 0.0452 (11) | −0.0038 (8) | 0.0172 (8) | 0.0003 (10) |
| C5 | 0.0196 (8) | 0.0318 (10) | 0.0285 (9) | −0.0051 (7) | 0.0080 (7) | −0.0037 (7) |
| C6 | 0.0194 (7) | 0.0285 (9) | 0.0225 (8) | 0.0031 (7) | 0.0066 (6) | 0.0014 (7) |
| C7 | 0.0218 (8) | 0.0217 (8) | 0.0194 (8) | −0.0035 (6) | 0.0098 (6) | −0.0058 (6) |
| C8 | 0.0240 (8) | 0.0299 (9) | 0.0181 (8) | −0.0004 (7) | 0.0053 (6) | −0.0013 (7) |
| O1W | 0.0290 (7) | 0.0249 (7) | 0.0357 (7) | 0.0008 (5) | 0.0145 (6) | −0.0014 (5) |
| O1 | 0.0236 (6) | 0.0228 (6) | 0.0306 (6) | −0.0026 (5) | 0.0138 (5) | 0.0003 (5) |
| O2W | 0.0377 (8) | 0.0566 (10) | 0.0238 (7) | 0.0112 (7) | 0.0144 (6) | 0.0103 (6) |
| O2 | 0.0555 (9) | 0.0399 (8) | 0.0258 (7) | 0.0123 (7) | 0.0187 (6) | 0.0097 (6) |
| O3 | 0.0220 (6) | 0.0209 (6) | 0.0421 (7) | −0.0007 (5) | 0.0145 (5) | −0.0011 (5) |
| O4 | 0.0364 (7) | 0.0357 (8) | 0.0218 (6) | 0.0119 (6) | 0.0137 (5) | 0.0046 (5) |
| O5 | 0.0234 (6) | 0.0249 (6) | 0.0254 (6) | 0.0001 (5) | 0.0118 (5) | 0.0019 (5) |
| Ni1 | 0.02056 (12) | 0.02009 (13) | 0.01992 (12) | 0.00083 (8) | 0.00979 (9) | 0.00170 (8) |
| C1—C7 | 1.514 (2) | C6—H6A | 0.9800 |
| C1—C2 | 1.532 (2) | C7—O1 | 1.254 (2) |
| C1—C6 | 1.580 (2) | C7—O3 | 1.257 (2) |
| C1—H1A | 0.9800 | C8—O2 | 1.239 (2) |
| C2—O5 | 1.460 (2) | C8—O4 | 1.275 (2) |
| C2—C3 | 1.517 (2) | O1W—Ni1 | 2.0834 (13) |
| C2—H2A | 0.9800 | O1W—H1WA | 0.841 (15) |
| C3—C4 | 1.546 (3) | O1W—H1WB | 0.822 (15) |
| C3—H3A | 0.9700 | O1—Ni1i | 2.0027 (12) |
| C3—H3B | 0.9700 | O2W—Ni1 | 2.0255 (13) |
| C4—C5 | 1.529 (2) | O2W—H2WA | 0.824 (16) |
| C4—H4A | 0.9700 | O2W—H2WB | 0.802 (16) |
| C4—H4B | 0.9700 | O3—Ni1 | 2.0608 (12) |
| C5—O5 | 1.457 (2) | O4—Ni1 | 2.0393 (12) |
| C5—C6 | 1.538 (2) | O5—Ni1 | 2.0809 (11) |
| C5—H5A | 0.9800 | Ni1—O1ii | 2.0027 (12) |
| C6—C8 | 1.533 (2) | ||
| C7—C1—C2 | 111.72 (13) | C1—C6—H6A | 110.1 |
| C7—C1—C6 | 111.48 (13) | O1—C7—O3 | 124.24 (14) |
| C2—C1—C6 | 101.96 (13) | O1—C7—C1 | 116.61 (15) |
| C7—C1—H1A | 110.5 | O3—C7—C1 | 119.13 (15) |
| C2—C1—H1A | 110.5 | O2—C8—O4 | 123.98 (16) |
| C6—C1—H1A | 110.5 | O2—C8—C6 | 119.16 (16) |
| O5—C2—C3 | 102.07 (14) | O4—C8—C6 | 116.85 (14) |
| O5—C2—C1 | 101.93 (12) | Ni1—O1W—H1WA | 110.9 (17) |
| C3—C2—C1 | 110.77 (14) | Ni1—O1W—H1WB | 109.8 (17) |
| O5—C2—H2A | 113.6 | H1WA—O1W—H1WB | 106.5 (19) |
| C3—C2—H2A | 113.6 | C7—O1—Ni1i | 125.62 (11) |
| C1—C2—H2A | 113.6 | Ni1—O2W—H2WA | 119.0 (17) |
| C2—C3—C4 | 101.47 (14) | Ni1—O2W—H2WB | 122.3 (17) |
| C2—C3—H3A | 111.5 | H2WA—O2W—H2WB | 109 (2) |
| C4—C3—H3A | 111.5 | C7—O3—Ni1 | 120.63 (11) |
| C2—C3—H3B | 111.5 | C8—O4—Ni1 | 123.69 (11) |
| C4—C3—H3B | 111.5 | C5—O5—C2 | 96.15 (13) |
| H3A—C3—H3B | 109.3 | C5—O5—Ni1 | 115.54 (9) |
| C5—C4—C3 | 102.17 (14) | C2—O5—Ni1 | 113.69 (9) |
| C5—C4—H4A | 111.3 | O1ii—Ni1—O2W | 87.33 (6) |
| C3—C4—H4A | 111.3 | O1ii—Ni1—O4 | 90.36 (5) |
| C5—C4—H4B | 111.3 | O2W—Ni1—O4 | 177.14 (6) |
| C3—C4—H4B | 111.3 | O1ii—Ni1—O3 | 82.07 (5) |
| H4A—C4—H4B | 109.2 | O2W—Ni1—O3 | 91.92 (6) |
| O5—C5—C4 | 101.75 (14) | O4—Ni1—O3 | 86.09 (5) |
| O5—C5—C6 | 102.27 (13) | O1ii—Ni1—O5 | 172.30 (5) |
| C4—C5—C6 | 110.67 (16) | O2W—Ni1—O5 | 91.84 (5) |
| O5—C5—H5A | 113.7 | O4—Ni1—O5 | 90.22 (5) |
| C4—C5—H5A | 113.7 | O3—Ni1—O5 | 90.31 (5) |
| C6—C5—H5A | 113.7 | O1ii—Ni1—O1W | 103.17 (5) |
| C8—C6—C5 | 112.87 (15) | O2W—Ni1—O1W | 88.95 (6) |
| C8—C6—C1 | 113.00 (13) | O4—Ni1—O1W | 93.22 (5) |
| C5—C6—C1 | 100.21 (13) | O3—Ni1—O1W | 174.73 (5) |
| C8—C6—H6A | 110.1 | O5—Ni1—O1W | 84.46 (5) |
| C5—C6—H6A | 110.1 | ||
| C7—C1—C2—O5 | 85.11 (15) | C6—C8—O4—Ni1 | 28.8 (2) |
| C6—C1—C2—O5 | −34.06 (14) | C4—C5—O5—C2 | 56.04 (15) |
| C7—C1—C2—C3 | −166.92 (14) | C6—C5—O5—C2 | −58.43 (14) |
| C6—C1—C2—C3 | 73.92 (16) | C4—C5—O5—Ni1 | 176.00 (11) |
| O5—C2—C3—C4 | 35.96 (17) | C6—C5—O5—Ni1 | 61.53 (14) |
| C1—C2—C3—C4 | −71.93 (18) | C3—C2—O5—C5 | −57.44 (14) |
| C2—C3—C4—C5 | −1.3 (2) | C1—C2—O5—C5 | 57.12 (13) |
| C3—C4—C5—O5 | −33.65 (19) | C3—C2—O5—Ni1 | −178.84 (10) |
| C3—C4—C5—C6 | 74.44 (18) | C1—C2—O5—Ni1 | −64.27 (13) |
| O5—C5—C6—C8 | −84.19 (16) | C8—O4—Ni1—O1ii | 133.87 (14) |
| C4—C5—C6—C8 | 168.06 (15) | C8—O4—Ni1—O2W | 97.8 (11) |
| O5—C5—C6—C1 | 36.27 (15) | C8—O4—Ni1—O3 | 51.85 (14) |
| C4—C5—C6—C1 | −71.48 (16) | C8—O4—Ni1—O5 | −38.45 (14) |
| C7—C1—C6—C8 | −0.2 (2) | C8—O4—Ni1—O1W | −122.91 (14) |
| C2—C1—C6—C8 | 119.17 (15) | C7—O3—Ni1—O1ii | −141.13 (13) |
| C7—C1—C6—C5 | −120.54 (14) | C7—O3—Ni1—O2W | 131.83 (12) |
| C2—C1—C6—C5 | −1.20 (15) | C7—O3—Ni1—O4 | −50.22 (12) |
| C2—C1—C7—O1 | 149.60 (15) | C7—O3—Ni1—O5 | 39.98 (12) |
| C6—C1—C7—O1 | −97.04 (17) | C7—O3—Ni1—O1W | 32.4 (6) |
| C2—C1—C7—O3 | −31.8 (2) | C5—O5—Ni1—O1ii | −105.7 (4) |
| C6—C1—C7—O3 | 81.59 (18) | C2—O5—Ni1—O1ii | 4.1 (4) |
| C5—C6—C8—O2 | −145.66 (17) | C5—O5—Ni1—O2W | 170.59 (12) |
| C1—C6—C8—O2 | 101.50 (19) | C2—O5—Ni1—O2W | −79.56 (11) |
| C5—C6—C8—O4 | 35.8 (2) | C5—O5—Ni1—O4 | −11.38 (12) |
| C1—C6—C8—O4 | −77.0 (2) | C2—O5—Ni1—O4 | 98.46 (11) |
| O3—C7—O1—Ni1i | −8.3 (2) | C5—O5—Ni1—O3 | −97.47 (11) |
| C1—C7—O1—Ni1i | 170.29 (10) | C2—O5—Ni1—O3 | 12.37 (10) |
| O1—C7—O3—Ni1 | 145.58 (13) | C5—O5—Ni1—O1W | 81.83 (12) |
| C1—C7—O3—Ni1 | −32.95 (18) | C2—O5—Ni1—O1W | −168.33 (11) |
| O2—C8—O4—Ni1 | −149.69 (15) |
| H··· | ||||
| O1W—H1WA···O2iii | 0.84 (2) | 2.06 (2) | 2.9027 (19) | 180 (3) |
| O1W—H1WB···O3ii | 0.82 (2) | 2.13 (2) | 2.7953 (17) | 137 (2) |
| O1W—H1WB···O1iv | 0.82 (2) | 2.37 (2) | 3.1013 (17) | 149 (2) |
| O2W—H2WA···O4iii | 0.82 (2) | 1.89 (2) | 2.6967 (19) | 167 (3) |
| O2W—H2WB···O2ii | 0.80 (2) | 2.34 (2) | 3.135 (2) | 170 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1 | 0.841 (15) | 2.062 (15) | 2.9027 (19) | 180 (3) |
| O1 | 0.822 (15) | 2.135 (18) | 2.7953 (17) | 137 (2) |
| O1 | 0.822 (15) | 2.366 (19) | 3.1013 (17) | 149 (2) |
| O2 | 0.824 (16) | 1.888 (16) | 2.6967 (19) | 167 (3) |
| O2 | 0.802 (16) | 2.341 (16) | 3.135 (2) | 170 (2) |
Symmetry codes: (i) ; (ii) ; (iii) .