Literature DB >> 21581776

catena-Poly[[diaqua-copper(II)]-μ-7-oxa-bicyclo-[2.2.1]heptane-2,3-dicarboxyl-ato].

Yun-Yun Wang1, Rui-Ding Hu, Yan-Jun Wang.   

Abstract

In the crystal structure of the title compound, [Cu(C(8)H(8)O(5))(H(2)O)(2)](n), the Cu(II) cation is in a Jahn-Teller distorted six-coordination by two O atoms from water molecules, by the bridging O atom from the bicyclo moiety, by two carboxylate O atoms from two different carboxylate groups and by one carboxylate O atom from a symmetry-related bridging ligand.The polymeric structure is made up from double-strands propagating parallel to the c axis that are held together via inter-molecular O-H⋯O hydrogen bonds.

Entities:  

Year:  2009        PMID: 21581776      PMCID: PMC2968279          DOI: 10.1107/S1600536809000270

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Yin et al. (2003 ▶).

Experimental

Crystal data

[Cu(C8H8O5)(H2O)2] M = 283.72 Orthorhombic, a = 10.5512 (4) Å b = 19.3389 (9) Å c = 9.7435 (4) Å V = 1988.15 (14) Å3 Z = 8 Mo Kα radiation μ = 2.22 mm−1 T = 296 (2) K 0.29 × 0.20 × 0.12 mm

Data collection

Bruker APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.60, T max = 0.78 7372 measured reflections 2078 independent reflections 1897 reflections with I > 2σ(I) R int = 0.021

Refinement

R[F 2 > 2σ(F 2)] = 0.022 wR(F 2) = 0.059 S = 1.02 2078 reflections 157 parameters 9 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.32 e Å−3 Δρmin = −0.38 e Å−3 Absolute structure: Flack (1983 ▶), 857 Friedel pairs Flack parameter: 0.001 (16) Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809000270/at2697sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809000270/at2697Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C8H8O5)(H2O)2]F(000) = 1160
Mr = 283.72Dx = 1.896 Mg m3
Orthorhombic, Iba2Mo Kα radiation, λ = 0.71073 Å
Hall symbol: I 2 -2cCell parameters from 4186 reflections
a = 10.5512 (4) Åθ = 2.1–27.5°
b = 19.3389 (9) ŵ = 2.22 mm1
c = 9.7435 (4) ÅT = 296 K
V = 1988.15 (14) Å3Block, green
Z = 80.29 × 0.20 × 0.12 mm
Bruker APEXII area-detector diffractometer2078 independent reflections
Radiation source: fine-focus sealed tube1897 reflections with I > 2σ(I)
graphiteRint = 0.021
ω scansθmax = 27.5°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −13→13
Tmin = 0.60, Tmax = 0.78k = −21→25
7372 measured reflectionsl = −10→12
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.022H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.059w = 1/[σ2(Fo2) + (0.0368P)2] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max < 0.001
2078 reflectionsΔρmax = 0.32 e Å3
157 parametersΔρmin = −0.38 e Å3
9 restraintsAbsolute structure: Flack (1983), 857 Freidel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.001 (16)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.243032 (19)0.040771 (14)0.45597 (9)0.02570 (9)
O10.08219 (15)0.14342 (9)0.76589 (19)0.0351 (4)
O1W0.11498 (18)−0.05770 (11)0.4992 (2)0.0476 (6)
H1WA0.117 (3)−0.0923 (14)0.447 (3)0.071*
H1WB0.044 (2)−0.0648 (17)0.538 (3)0.071*
O20.12635 (15)0.09609 (10)0.5661 (2)0.0367 (5)
O2W0.16510 (19)0.08276 (13)0.2897 (2)0.0471 (6)
H2WA0.092 (2)0.1034 (16)0.283 (4)0.071*
H2WB0.170 (3)0.0631 (18)0.218 (3)0.071*
O30.34512 (15)0.02601 (8)0.85851 (18)0.0285 (4)
O40.31828 (14)0.00547 (9)0.63735 (17)0.0287 (4)
O50.38661 (12)0.13101 (8)0.4694 (2)0.0278 (3)
C10.3288 (2)0.19244 (12)0.5275 (3)0.0324 (6)
H1A0.25970.21120.47170.039*
C20.4418 (3)0.24140 (14)0.5415 (3)0.0458 (7)
H2A0.42840.27490.61420.055*
H2B0.45880.26550.45620.055*
C30.5491 (2)0.19062 (15)0.5777 (3)0.0421 (7)
H3A0.61590.19150.50920.051*
H3B0.58510.20070.66710.051*
C40.4799 (2)0.12166 (13)0.5777 (3)0.0284 (5)
H4A0.53570.08180.56350.034*
C50.39748 (19)0.11620 (12)0.7068 (2)0.0242 (5)
H5A0.44440.13360.78650.029*
C60.2864 (2)0.16753 (12)0.6698 (3)0.0269 (5)
H6A0.28630.20650.73430.032*
C70.1552 (2)0.13317 (12)0.6683 (3)0.0268 (5)
C80.35037 (18)0.04365 (11)0.7353 (3)0.0221 (5)
U11U22U33U12U13U23
Cu10.02380 (12)0.03211 (16)0.02120 (16)0.00285 (9)−0.00032 (15)−0.00532 (16)
O10.0333 (8)0.0431 (10)0.0290 (10)0.0053 (8)0.0067 (8)−0.0028 (8)
O1W0.0330 (9)0.0613 (12)0.0486 (16)−0.0163 (8)0.0057 (8)−0.0157 (10)
O20.0241 (8)0.0512 (11)0.0347 (13)0.0028 (8)0.0018 (7)−0.0157 (10)
O2W0.0439 (10)0.0700 (16)0.0276 (12)0.0251 (10)−0.0055 (9)−0.0087 (10)
O30.0294 (8)0.0350 (9)0.0210 (10)−0.0072 (7)−0.0016 (7)0.0082 (8)
O40.0346 (8)0.0295 (9)0.0222 (9)−0.0048 (7)0.0009 (6)−0.0027 (7)
O50.0289 (6)0.0320 (8)0.0226 (9)−0.0002 (6)0.0016 (7)0.0006 (8)
C10.0382 (13)0.0283 (12)0.0307 (16)0.0052 (10)−0.0037 (11)0.0056 (12)
C20.0594 (19)0.0329 (15)0.0451 (19)−0.0131 (12)0.0053 (14)0.0066 (14)
C30.0381 (14)0.0525 (17)0.0358 (18)−0.0196 (12)0.0025 (12)0.0060 (13)
C40.0240 (10)0.0346 (13)0.0267 (14)−0.0013 (9)0.0013 (9)0.0051 (11)
C50.0227 (9)0.0287 (13)0.0211 (13)−0.0014 (9)−0.0027 (8)0.0002 (10)
C60.0322 (10)0.0243 (12)0.0242 (13)0.0040 (9)0.0004 (10)−0.0038 (11)
C70.0254 (10)0.0273 (12)0.0277 (14)0.0076 (9)−0.0022 (10)0.0022 (11)
C80.0134 (8)0.0285 (12)0.0245 (14)0.0024 (8)0.0014 (8)0.0003 (10)
Cu1—O3i1.9313 (16)C1—C21.528 (4)
Cu1—O21.9524 (17)C1—C61.535 (4)
Cu1—O2W1.990 (2)C1—H1A0.9800
Cu1—O42.0542 (19)C2—C31.540 (4)
Cu1—O52.3147 (14)C2—H2A0.9700
Cu1—O1W2.3726 (19)C2—H2B0.9700
O1—C71.240 (3)C3—C41.521 (3)
O1W—H1WA0.842 (17)C3—H3A0.9700
O1W—H1WB0.852 (17)C3—H3B0.9700
O2—C71.264 (3)C4—C51.533 (3)
O2W—H2WA0.871 (17)C4—H4A0.9800
O2W—H2WB0.795 (18)C5—C81.514 (3)
O3—C81.249 (3)C5—C61.578 (3)
O3—Cu1ii1.9313 (16)C5—H5A0.9800
O4—C81.253 (3)C6—C71.536 (3)
O5—C11.450 (3)C6—H6A0.9800
O5—C41.454 (3)
O3i—Cu1—O2171.25 (8)C3—C2—H2A111.5
O3i—Cu1—O2W95.92 (9)C1—C2—H2B111.5
O2—Cu1—O2W87.90 (8)C3—C2—H2B111.5
O3i—Cu1—O489.15 (7)H2A—C2—H2B109.3
O2—Cu1—O487.30 (8)C4—C3—C2101.87 (19)
O2W—Cu1—O4174.69 (8)C4—C3—H3A111.4
O3i—Cu1—O599.62 (6)C2—C3—H3A111.4
O2—Cu1—O588.19 (7)C4—C3—H3B111.4
O2W—Cu1—O590.51 (9)C2—C3—H3B111.4
O4—Cu1—O587.07 (6)H3A—C3—H3B109.3
O3i—Cu1—O1W82.43 (8)O5—C4—C3102.49 (19)
O2—Cu1—O1W89.03 (8)O5—C4—C5102.70 (16)
O2W—Cu1—O1W103.70 (9)C3—C4—C5109.4 (2)
O4—Cu1—O1W78.49 (7)O5—C4—H4A113.7
O5—Cu1—O1W165.41 (8)C3—C4—H4A113.7
Cu1—O1W—H1WA121 (2)C5—C4—H4A113.7
Cu1—O1W—H1WB135 (2)C8—C5—C4113.6 (2)
H1WA—O1W—H1WB99 (2)C8—C5—C6112.40 (17)
C7—O2—Cu1126.29 (15)C4—C5—C6100.98 (19)
Cu1—O2W—H2WA128 (3)C8—C5—H5A109.9
Cu1—O2W—H2WB120 (3)C4—C5—H5A109.9
H2WA—O2W—H2WB102 (2)C6—C5—H5A109.9
C8—O3—Cu1ii132.82 (15)C1—C6—C7112.9 (2)
C8—O4—Cu1124.31 (15)C1—C6—C5100.79 (19)
C1—O5—C495.93 (17)C7—C6—C5113.56 (18)
C1—O5—Cu1111.39 (12)C1—C6—H6A109.7
C4—O5—Cu1112.98 (13)C7—C6—H6A109.7
O5—C1—C2102.40 (19)C5—C6—H6A109.7
O5—C1—C6102.60 (18)O1—C7—O2123.0 (2)
C2—C1—C6110.0 (2)O1—C7—C6118.9 (2)
O5—C1—H1A113.6O2—C7—C6118.1 (2)
C2—C1—H1A113.6O3—C8—O4124.0 (2)
C6—C1—H1A113.6O3—C8—C5116.3 (2)
C1—C2—C3101.5 (2)O4—C8—C5119.7 (2)
C1—C2—H2A111.5
O2W—Cu1—O2—C7−131.2 (2)C2—C3—C4—O534.5 (2)
O4—Cu1—O2—C746.5 (2)C2—C3—C4—C5−74.0 (3)
O5—Cu1—O2—C7−40.6 (2)O5—C4—C5—C886.0 (2)
O1W—Cu1—O2—C7125.0 (2)C3—C4—C5—C8−165.65 (19)
O3i—Cu1—O4—C8139.29 (16)O5—C4—C5—C6−34.5 (2)
O2—Cu1—O4—C8−48.70 (17)C3—C4—C5—C673.8 (2)
O5—Cu1—O4—C839.62 (16)O5—C1—C6—C7−85.9 (2)
O1W—Cu1—O4—C8−138.26 (17)C2—C1—C6—C7165.7 (2)
O3i—Cu1—O5—C1174.10 (15)O5—C1—C6—C535.6 (2)
O2—Cu1—O5—C1−9.87 (16)C2—C1—C6—C5−72.8 (2)
O2W—Cu1—O5—C178.01 (16)C8—C5—C6—C1−122.0 (2)
O4—Cu1—O5—C1−97.26 (16)C4—C5—C6—C1−0.6 (2)
O1W—Cu1—O5—C1−89.0 (3)C8—C5—C6—C7−0.9 (3)
O3i—Cu1—O5—C4−79.25 (15)C4—C5—C6—C7120.5 (2)
O2—Cu1—O5—C496.78 (15)Cu1—O2—C7—O1−148.85 (19)
O2W—Cu1—O5—C4−175.34 (15)Cu1—O2—C7—C631.8 (3)
O4—Cu1—O5—C49.39 (14)C1—C6—C7—O1−142.1 (2)
O1W—Cu1—O5—C417.7 (3)C5—C6—C7—O1104.0 (3)
C4—O5—C1—C256.4 (2)C1—C6—C7—O237.3 (3)
Cu1—O5—C1—C2173.91 (15)C5—C6—C7—O2−76.7 (3)
C4—O5—C1—C6−57.6 (2)Cu1ii—O3—C8—O4−25.2 (3)
Cu1—O5—C1—C659.9 (2)Cu1ii—O3—C8—C5154.10 (15)
O5—C1—C2—C3−34.9 (3)Cu1—O4—C8—O3148.71 (18)
C6—C1—C2—C373.6 (3)Cu1—O4—C8—C5−30.6 (2)
C1—C2—C3—C40.2 (3)C4—C5—C8—O3142.9 (2)
C1—O5—C4—C3−56.3 (2)C6—C5—C8—O3−103.2 (2)
Cu1—O5—C4—C3−172.55 (15)C4—C5—C8—O4−37.8 (3)
C1—O5—C4—C557.25 (19)C6—C5—C8—O476.1 (3)
Cu1—O5—C4—C5−59.00 (19)
D—H···AD—HH···AD···AD—H···A
O1W—H1WA···O1i0.84 (2)2.05 (2)2.835 (3)154 (4)
O1W—H1WB···O2iii0.85 (2)1.91 (2)2.731 (2)161 (3)
O2W—H2WA···O1iv0.87 (2)2.00 (2)2.870 (2)175 (3)
O2W—H2WB···O1Wi0.80 (2)2.21 (3)2.920 (3)148 (3)
O2W—H2WB···O4i0.80 (2)2.20 (3)2.780 (3)130 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1WA⋯O1i0.842 (17)2.05 (2)2.835 (3)154 (4)
O1W—H1WB⋯O2ii0.852 (17)1.91 (2)2.731 (2)161 (3)
O2W—H2WA⋯O1iii0.871 (17)2.001 (18)2.870 (2)175 (3)
O2W—H2WB⋯O1Wi0.795 (18)2.21 (3)2.920 (3)148 (3)
O2W—H2WB⋯O4i0.795 (18)2.20 (3)2.780 (3)130 (3)

Symmetry codes: (i) ; (ii) ; (iii) .

  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  2 in total

1.  catena-Poly[[diaqua-nickel(II)]-μ-7-oxabicyclo-[2.2.1]heptane-2,3-di-carboxyl-ato].

Authors:  Yun-Yun Wang; Rui-Ding Hu; Wen-Zhong Zhu; Qiu-Yue Lin
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-17

2.  catena-Poly[[diaqua-cobalt(II)]-μ(2)-7-oxa-bicyclo-[2.2.1]heptane-2,3-dicarboxyl-ato-κO,O,O:O].

Authors:  Fan Zhang; Qiu-Yue Lin; Yong-Chang Wang; Ji-Du He
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-01-14
  2 in total

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