| Literature DB >> 21582621 |
G Varsha1, V Arun, Manju Sebastian, P Leeju, Digna Varghese, K K M Yusuff.
Abstract
The asymmetric unit of the title compound, C(11)H(8)N(4), contains two independent mol-ecules. In the crystal structure, inter-molecular N-H⋯N hydrogen bonds link mol-ecules into ribbons extended in the [100] direction.Entities:
Year: 2009 PMID: 21582621 PMCID: PMC2968917 DOI: 10.1107/S1600536809010873
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C11H8N4 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 4803 reflections |
| θ = 2.4–26.1° | |
| µ = 0.08 mm−1 | |
| β = 100.983 (5)° | Rod, yellow |
| 0.42 × 0.18 × 0.18 mm | |
| Bruker SMART APEX CCD area-detector diffractometer | 4173 independent reflections |
| Radiation source: fine-focus sealed tube | 3216 reflections with |
| graphite | |
| φ and ω scans | θmax = 26.1°, θmin = 1.8° |
| Absorption correction: multi-scan ( | |
| 12239 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 4173 reflections | Δρmax = 0.22 e Å−3 |
| 272 parameters | Δρmin = −0.21 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0021 (6) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.3264 (5) | 0.39467 (14) | 0.3626 (2) | 0.0398 (8) | |
| C2 | 0.3971 (6) | 0.34110 (16) | 0.3379 (3) | 0.0590 (11) | |
| H2 | 0.5196 | 0.3387 | 0.3202 | 0.071* | |
| C3 | 0.2851 (8) | 0.29092 (19) | 0.3397 (4) | 0.0772 (14) | |
| H3 | 0.3324 | 0.2548 | 0.3229 | 0.093* | |
| C4 | 0.1054 (8) | 0.2944 (2) | 0.3661 (4) | 0.0792 (15) | |
| H4 | 0.0313 | 0.2606 | 0.3677 | 0.095* | |
| C5 | 0.0339 (6) | 0.3473 (2) | 0.3902 (3) | 0.0673 (12) | |
| H5 | −0.0887 | 0.3494 | 0.4078 | 0.081* | |
| C6 | 0.1427 (5) | 0.39773 (17) | 0.3883 (3) | 0.0501 (9) | |
| H6 | 0.0933 | 0.4337 | 0.4043 | 0.060* | |
| C7 | 0.4454 (5) | 0.44731 (14) | 0.3591 (3) | 0.0388 (8) | |
| H7 | 0.5684 | 0.4436 | 0.3422 | 0.047* | |
| C8 | 0.5013 (4) | 0.54703 (14) | 0.3760 (2) | 0.0366 (8) | |
| C9 | 0.4227 (5) | 0.60037 (14) | 0.3899 (3) | 0.0397 (8) | |
| C10 | 0.6996 (5) | 0.54341 (15) | 0.3605 (3) | 0.0469 (9) | |
| C11 | 0.5356 (5) | 0.65316 (15) | 0.3859 (3) | 0.0459 (9) | |
| N1 | 0.3855 (4) | 0.49769 (11) | 0.3784 (2) | 0.0367 (7) | |
| N2 | 0.2412 (4) | 0.60811 (13) | 0.4084 (2) | 0.0558 (9) | |
| H2A | 0.1673 | 0.5783 | 0.4122 | 0.067* | |
| H2B | 0.1991 | 0.6429 | 0.4165 | 0.067* | |
| N3 | 0.8559 (5) | 0.53781 (16) | 0.3485 (3) | 0.0764 (12) | |
| N4 | 0.6208 (5) | 0.69534 (14) | 0.3808 (3) | 0.0693 (11) | |
| C12 | 0.2008 (5) | 0.53605 (15) | 0.1295 (3) | 0.0452 (9) | |
| C13 | 0.3849 (5) | 0.53053 (17) | 0.1052 (3) | 0.0550 (10) | |
| H13 | 0.4312 | 0.4934 | 0.0933 | 0.066* | |
| C14 | 0.4994 (7) | 0.5783 (2) | 0.0985 (4) | 0.0736 (13) | |
| H14 | 0.6224 | 0.5739 | 0.0819 | 0.088* | |
| C15 | 0.4310 (8) | 0.6331 (2) | 0.1165 (4) | 0.0823 (16) | |
| H15 | 0.5078 | 0.6659 | 0.1109 | 0.099* | |
| C16 | 0.2515 (9) | 0.64021 (18) | 0.1425 (4) | 0.0821 (16) | |
| H16 | 0.2090 | 0.6775 | 0.1562 | 0.098* | |
| C17 | 0.1334 (7) | 0.59197 (17) | 0.1484 (3) | 0.0639 (12) | |
| H17 | 0.0104 | 0.5967 | 0.1648 | 0.077* | |
| C18 | 0.0775 (5) | 0.48496 (15) | 0.1349 (3) | 0.0450 (9) | |
| H18 | −0.0432 | 0.4899 | 0.1538 | 0.054* | |
| C19 | 0.0133 (4) | 0.38528 (14) | 0.1179 (3) | 0.0379 (8) | |
| C20 | 0.0863 (5) | 0.33203 (15) | 0.0987 (3) | 0.0416 (8) | |
| C21 | −0.1801 (5) | 0.38947 (15) | 0.1396 (3) | 0.0450 (9) | |
| C22 | −0.0336 (6) | 0.28020 (17) | 0.0983 (3) | 0.0540 (10) | |
| N5 | 0.1316 (4) | 0.43361 (12) | 0.1143 (2) | 0.0396 (7) | |
| N6 | 0.2648 (4) | 0.32364 (12) | 0.0767 (2) | 0.0555 (9) | |
| H6A | 0.3410 | 0.3531 | 0.0741 | 0.067* | |
| H6B | 0.3028 | 0.2888 | 0.0652 | 0.067* | |
| N7 | −0.3334 (4) | 0.39419 (15) | 0.1568 (3) | 0.0660 (10) | |
| N8 | −0.1258 (5) | 0.23914 (15) | 0.0977 (3) | 0.0809 (13) |
| C1 | 0.0501 (19) | 0.0328 (18) | 0.0338 (19) | −0.0032 (15) | 0.0015 (15) | 0.0035 (15) |
| C2 | 0.070 (3) | 0.036 (2) | 0.069 (3) | 0.0021 (19) | 0.007 (2) | 0.002 (2) |
| C3 | 0.112 (4) | 0.035 (2) | 0.079 (3) | −0.002 (3) | 0.006 (3) | 0.005 (2) |
| C4 | 0.110 (4) | 0.053 (3) | 0.070 (3) | −0.038 (3) | 0.006 (3) | 0.010 (2) |
| C5 | 0.067 (3) | 0.069 (3) | 0.064 (3) | −0.026 (2) | 0.009 (2) | 0.003 (2) |
| C6 | 0.056 (2) | 0.042 (2) | 0.052 (2) | −0.0072 (17) | 0.0069 (18) | 0.0007 (18) |
| C7 | 0.0369 (17) | 0.0353 (19) | 0.045 (2) | 0.0016 (14) | 0.0104 (15) | −0.0001 (15) |
| C8 | 0.0334 (16) | 0.0365 (19) | 0.0387 (19) | −0.0038 (14) | 0.0042 (14) | −0.0004 (15) |
| C9 | 0.0413 (18) | 0.0328 (18) | 0.044 (2) | −0.0093 (15) | 0.0064 (15) | 0.0002 (16) |
| C10 | 0.044 (2) | 0.039 (2) | 0.059 (2) | −0.0075 (16) | 0.0116 (17) | −0.0016 (17) |
| C11 | 0.051 (2) | 0.034 (2) | 0.050 (2) | −0.0021 (17) | 0.0028 (17) | 0.0064 (17) |
| N1 | 0.0324 (13) | 0.0315 (15) | 0.0451 (17) | −0.0031 (12) | 0.0045 (12) | 0.0013 (13) |
| N2 | 0.0506 (17) | 0.0364 (17) | 0.085 (3) | −0.0009 (14) | 0.0238 (17) | −0.0085 (16) |
| N3 | 0.0413 (18) | 0.066 (2) | 0.127 (4) | −0.0080 (17) | 0.030 (2) | −0.011 (2) |
| N4 | 0.078 (2) | 0.038 (2) | 0.089 (3) | −0.0181 (18) | 0.010 (2) | 0.0034 (18) |
| C12 | 0.057 (2) | 0.0302 (19) | 0.042 (2) | −0.0028 (16) | −0.0046 (17) | 0.0012 (16) |
| C13 | 0.060 (2) | 0.048 (2) | 0.057 (3) | −0.0086 (19) | 0.010 (2) | 0.0004 (19) |
| C14 | 0.085 (3) | 0.058 (3) | 0.077 (3) | −0.026 (2) | 0.013 (3) | −0.002 (2) |
| C15 | 0.109 (4) | 0.060 (3) | 0.070 (3) | −0.038 (3) | −0.005 (3) | 0.007 (3) |
| C16 | 0.125 (4) | 0.022 (2) | 0.084 (4) | −0.002 (3) | −0.018 (3) | 0.002 (2) |
| C17 | 0.078 (3) | 0.040 (2) | 0.067 (3) | 0.009 (2) | −0.006 (2) | −0.006 (2) |
| C18 | 0.0454 (19) | 0.044 (2) | 0.045 (2) | 0.0033 (16) | 0.0091 (16) | −0.0035 (17) |
| C19 | 0.0361 (16) | 0.0337 (19) | 0.043 (2) | −0.0032 (14) | 0.0058 (15) | 0.0029 (15) |
| C20 | 0.0466 (19) | 0.0349 (19) | 0.043 (2) | −0.0065 (15) | 0.0083 (16) | −0.0014 (16) |
| C21 | 0.0450 (19) | 0.038 (2) | 0.051 (2) | −0.0029 (16) | 0.0064 (17) | −0.0022 (17) |
| C22 | 0.054 (2) | 0.041 (2) | 0.070 (3) | −0.0045 (18) | 0.017 (2) | −0.006 (2) |
| N5 | 0.0410 (15) | 0.0309 (15) | 0.0456 (17) | −0.0022 (12) | 0.0050 (13) | −0.0021 (13) |
| N6 | 0.0520 (18) | 0.0287 (16) | 0.093 (3) | 0.0009 (14) | 0.0315 (18) | −0.0022 (16) |
| N7 | 0.0443 (18) | 0.070 (2) | 0.088 (3) | −0.0002 (17) | 0.0241 (18) | 0.002 (2) |
| N8 | 0.072 (2) | 0.046 (2) | 0.127 (4) | −0.0218 (19) | 0.026 (2) | −0.005 (2) |
| C1—C2 | 1.381 (5) | C12—C13 | 1.387 (5) |
| C1—C6 | 1.389 (5) | C12—C17 | 1.398 (5) |
| C1—C7 | 1.464 (4) | C12—C18 | 1.457 (5) |
| C2—C3 | 1.387 (6) | C13—C14 | 1.362 (5) |
| C2—H2 | 0.9300 | C13—H13 | 0.9300 |
| C3—C4 | 1.365 (7) | C14—C15 | 1.375 (6) |
| C3—H3 | 0.9300 | C14—H14 | 0.9300 |
| C4—C5 | 1.369 (6) | C15—C16 | 1.370 (7) |
| C4—H4 | 0.9300 | C15—H15 | 0.9300 |
| C5—C6 | 1.378 (5) | C16—C17 | 1.384 (6) |
| C5—H5 | 0.9300 | C16—H16 | 0.9300 |
| C6—H6 | 0.9300 | C17—H17 | 0.9300 |
| C7—N1 | 1.266 (4) | C18—N5 | 1.276 (4) |
| C7—H7 | 0.9300 | C18—H18 | 0.9300 |
| C8—C9 | 1.360 (4) | C19—C20 | 1.360 (4) |
| C8—N1 | 1.387 (4) | C19—N5 | 1.382 (4) |
| C8—C10 | 1.437 (4) | C19—C21 | 1.434 (4) |
| C9—N2 | 1.345 (4) | C20—N6 | 1.344 (4) |
| C9—C11 | 1.443 (4) | C20—C22 | 1.446 (5) |
| C10—N3 | 1.136 (4) | C21—N7 | 1.139 (4) |
| C11—N4 | 1.138 (4) | C22—N8 | 1.134 (4) |
| N2—H2A | 0.8600 | N6—H6A | 0.8600 |
| N2—H2B | 0.8600 | N6—H6B | 0.8600 |
| C2—C1—C6 | 119.5 (3) | C13—C12—C17 | 118.9 (4) |
| C2—C1—C7 | 119.2 (3) | C13—C12—C18 | 121.2 (3) |
| C6—C1—C7 | 121.3 (3) | C17—C12—C18 | 119.9 (4) |
| C1—C2—C3 | 119.9 (4) | C14—C13—C12 | 121.4 (4) |
| C1—C2—H2 | 120.1 | C14—C13—H13 | 119.3 |
| C3—C2—H2 | 120.1 | C12—C13—H13 | 119.3 |
| C4—C3—C2 | 120.1 (4) | C13—C14—C15 | 119.2 (5) |
| C4—C3—H3 | 119.9 | C13—C14—H14 | 120.4 |
| C2—C3—H3 | 119.9 | C15—C14—H14 | 120.4 |
| C3—C4—C5 | 120.3 (4) | C16—C15—C14 | 121.1 (4) |
| C3—C4—H4 | 119.8 | C16—C15—H15 | 119.5 |
| C5—C4—H4 | 119.8 | C14—C15—H15 | 119.5 |
| C4—C5—C6 | 120.3 (4) | C15—C16—C17 | 120.1 (4) |
| C4—C5—H5 | 119.8 | C15—C16—H16 | 120.0 |
| C6—C5—H5 | 119.8 | C17—C16—H16 | 120.0 |
| C5—C6—C1 | 119.8 (4) | C16—C17—C12 | 119.4 (4) |
| C5—C6—H6 | 120.1 | C16—C17—H17 | 120.3 |
| C1—C6—H6 | 120.1 | C12—C17—H17 | 120.3 |
| N1—C7—C1 | 121.8 (3) | N5—C18—C12 | 121.4 (3) |
| N1—C7—H7 | 119.1 | N5—C18—H18 | 119.3 |
| C1—C7—H7 | 119.1 | C12—C18—H18 | 119.3 |
| C9—C8—N1 | 118.1 (3) | C20—C19—N5 | 117.3 (3) |
| C9—C8—C10 | 119.6 (3) | C20—C19—C21 | 119.9 (3) |
| N1—C8—C10 | 122.3 (3) | N5—C19—C21 | 122.9 (3) |
| N2—C9—C8 | 124.0 (3) | N6—C20—C19 | 124.3 (3) |
| N2—C9—C11 | 115.7 (3) | N6—C20—C22 | 116.1 (3) |
| C8—C9—C11 | 120.3 (3) | C19—C20—C22 | 119.6 (3) |
| N3—C10—C8 | 176.8 (4) | N7—C21—C19 | 178.4 (4) |
| N4—C11—C9 | 178.2 (4) | N8—C22—C20 | 179.1 (4) |
| C7—N1—C8 | 121.0 (3) | C18—N5—C19 | 121.4 (3) |
| C9—N2—H2A | 120.0 | C20—N6—H6A | 120.0 |
| C9—N2—H2B | 120.0 | C20—N6—H6B | 120.0 |
| H2A—N2—H2B | 120.0 | H6A—N6—H6B | 120.0 |
| H··· | ||||
| N2—H2A···N3i | 0.86 | 2.36 | 3.096 (4) | 144 |
| N2—H2B···N8ii | 0.86 | 2.25 | 3.090 (5) | 165 |
| N6—H6A···N7iii | 0.86 | 2.51 | 3.228 (5) | 142 |
| N6—H6B···N4iv | 0.86 | 2.28 | 3.057 (4) | 150 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2 | 0.86 | 2.36 | 3.096 (4) | 144 |
| N2—H2 | 0.86 | 2.25 | 3.090 (5) | 165 |
| N6—H6 | 0.86 | 2.51 | 3.228 (5) | 142 |
| N6—H6 | 0.86 | 2.28 | 3.057 (4) | 150 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .