| Literature DB >> 21582599 |
Hoong-Kun Fun, Samuel Robinson Jebas, Annada C Maity, Nirmal K Das, Shyamaprasad Goswami.
Abstract
In the title compound, C(20)H(16)S(2), the pyrene ring is planar [maximum deviation 0.0144 (15) Å] and the dithiane ring adopts a chair conformation. The crystal packing is stabilized by C-H⋯π inter-actions. An intra-molecular C-H⋯S hydrogen bond generates an S(5) ring motif.Entities:
Year: 2009 PMID: 21582599 PMCID: PMC2969099 DOI: 10.1107/S1600536809010320
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H16S2 | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 9340 reflections |
| θ = 2.5–33.7° | |
| µ = 0.35 mm−1 | |
| Block, colourless | |
| 0.36 × 0.17 × 0.11 mm |
| Bruker SMART APEXII CCD area-detector diffractometer | 6424 independent reflections |
| Radiation source: fine-focus sealed tube | 5501 reflections with |
| graphite | |
| φ and ω scans | θmax = 35.1°, θmin = 1.7° |
| Absorption correction: multi-scan ( | |
| 29712 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.004 | |
| 6424 reflections | Δρmax = 0.48 e Å−3 |
| 199 parameters | Δρmin = −0.27 e Å−3 |
| 0 restraints | Absolute structure: Flack (1983), 2662 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.03 (5) |
| Experimental. The crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.38288 (5) | 0.10233 (4) | 0.977454 (13) | 0.01668 (8) | |
| S2 | 0.68513 (5) | −0.07534 (4) | 1.037145 (12) | 0.01665 (8) | |
| C1 | 0.6709 (2) | −0.12016 (15) | 0.77433 (5) | 0.0134 (2) | |
| C2 | 0.73272 (19) | −0.07300 (16) | 0.82744 (5) | 0.0131 (2) | |
| C3 | 0.9112 (2) | −0.00108 (16) | 0.83308 (5) | 0.0140 (2) | |
| C4 | 1.0265 (2) | 0.01927 (17) | 0.78565 (6) | 0.0173 (3) | |
| H4A | 1.1443 | 0.0640 | 0.7894 | 0.021* | |
| C5 | 0.9675 (2) | −0.02513 (17) | 0.73559 (6) | 0.0177 (3) | |
| H5A | 1.0456 | −0.0107 | 0.7057 | 0.021* | |
| C6 | 0.7869 (2) | −0.09392 (16) | 0.72787 (5) | 0.0156 (3) | |
| C7 | 0.7187 (2) | −0.13545 (17) | 0.67611 (5) | 0.0180 (3) | |
| H7A | 0.7932 | −0.1193 | 0.6455 | 0.022* | |
| C8 | 0.5425 (2) | −0.19998 (17) | 0.66994 (6) | 0.0190 (3) | |
| H8A | 0.4998 | −0.2264 | 0.6353 | 0.023* | |
| C9 | 0.4287 (2) | −0.22556 (16) | 0.71502 (5) | 0.0180 (3) | |
| H9A | 0.3102 | −0.2682 | 0.7103 | 0.022* | |
| C10 | 0.4912 (2) | −0.18750 (16) | 0.76761 (5) | 0.0145 (2) | |
| C11 | 0.3773 (2) | −0.21097 (16) | 0.81490 (5) | 0.0162 (3) | |
| H11A | 0.2612 | −0.2588 | 0.8110 | 0.019* | |
| C12 | 0.4341 (2) | −0.16537 (17) | 0.86520 (5) | 0.0155 (3) | |
| H12A | 0.3555 | −0.1810 | 0.8950 | 0.019* | |
| C13 | 0.61341 (19) | −0.09331 (15) | 0.87345 (5) | 0.0129 (2) | |
| C14 | 0.6739 (2) | −0.03780 (15) | 0.92506 (5) | 0.0139 (2) | |
| C15 | 0.8468 (2) | 0.03716 (16) | 0.92932 (5) | 0.0159 (3) | |
| H15A | 0.8838 | 0.0771 | 0.9629 | 0.019* | |
| C16 | 0.9649 (2) | 0.05354 (16) | 0.88468 (5) | 0.0164 (3) | |
| H16A | 1.0808 | 0.1012 | 0.8890 | 0.020* | |
| C17 | 0.54924 (19) | −0.05773 (15) | 0.97455 (5) | 0.0142 (2) | |
| H17A | 0.4780 | −0.1542 | 0.9698 | 0.017* | |
| C18 | 0.2364 (2) | 0.03068 (18) | 1.03263 (5) | 0.0201 (3) | |
| H18A | 0.1366 | 0.1049 | 1.0391 | 0.024* | |
| H18B | 0.1791 | −0.0663 | 1.0213 | 0.024* | |
| C19 | 0.3411 (2) | 0.00340 (18) | 1.08623 (5) | 0.0184 (3) | |
| H19A | 0.3993 | 0.1001 | 1.0975 | 0.022* | |
| H19B | 0.2516 | −0.0259 | 1.1142 | 0.022* | |
| C20 | 0.4911 (2) | −0.12196 (17) | 1.08241 (5) | 0.0174 (3) | |
| H20A | 0.4331 | −0.2175 | 1.0699 | 0.021* | |
| H20B | 0.5404 | −0.1410 | 1.1187 | 0.021* |
| S1 | 0.01679 (16) | 0.01854 (16) | 0.01470 (14) | 0.00372 (13) | −0.00236 (11) | 0.00034 (12) |
| S2 | 0.01684 (15) | 0.02099 (17) | 0.01214 (13) | 0.00328 (14) | −0.00233 (11) | 0.00104 (12) |
| C1 | 0.0165 (6) | 0.0116 (5) | 0.0120 (5) | 0.0012 (5) | −0.0008 (4) | −0.0008 (4) |
| C2 | 0.0142 (6) | 0.0121 (6) | 0.0131 (5) | 0.0004 (5) | −0.0012 (4) | 0.0010 (4) |
| C3 | 0.0131 (6) | 0.0128 (6) | 0.0160 (5) | 0.0010 (5) | −0.0021 (5) | 0.0015 (4) |
| C4 | 0.0148 (7) | 0.0169 (6) | 0.0203 (6) | 0.0002 (5) | 0.0011 (5) | 0.0020 (5) |
| C5 | 0.0171 (7) | 0.0185 (7) | 0.0177 (6) | 0.0019 (5) | 0.0038 (5) | 0.0024 (5) |
| C6 | 0.0174 (6) | 0.0145 (6) | 0.0148 (5) | 0.0021 (5) | 0.0004 (4) | 0.0012 (5) |
| C7 | 0.0236 (7) | 0.0177 (7) | 0.0128 (6) | 0.0025 (5) | 0.0003 (5) | 0.0001 (5) |
| C8 | 0.0256 (7) | 0.0182 (7) | 0.0133 (6) | 0.0021 (6) | −0.0034 (5) | −0.0019 (5) |
| C9 | 0.0216 (7) | 0.0158 (6) | 0.0166 (6) | −0.0008 (5) | −0.0035 (5) | −0.0020 (5) |
| C10 | 0.0178 (6) | 0.0124 (6) | 0.0134 (5) | 0.0001 (5) | −0.0017 (5) | −0.0019 (4) |
| C11 | 0.0159 (6) | 0.0169 (6) | 0.0159 (6) | −0.0033 (5) | −0.0015 (5) | −0.0010 (5) |
| C12 | 0.0159 (6) | 0.0164 (6) | 0.0141 (5) | −0.0028 (5) | 0.0002 (5) | 0.0007 (5) |
| C13 | 0.0153 (6) | 0.0103 (5) | 0.0130 (5) | 0.0004 (5) | −0.0015 (4) | 0.0001 (4) |
| C14 | 0.0151 (6) | 0.0133 (6) | 0.0133 (5) | 0.0012 (5) | −0.0021 (5) | 0.0003 (4) |
| C15 | 0.0181 (7) | 0.0157 (6) | 0.0138 (5) | −0.0010 (5) | −0.0043 (5) | −0.0001 (5) |
| C16 | 0.0147 (6) | 0.0160 (6) | 0.0186 (6) | −0.0016 (5) | −0.0027 (5) | 0.0016 (5) |
| C17 | 0.0163 (6) | 0.0148 (6) | 0.0115 (5) | 0.0014 (5) | −0.0024 (4) | −0.0008 (4) |
| C18 | 0.0154 (6) | 0.0269 (7) | 0.0179 (6) | 0.0021 (6) | −0.0001 (5) | −0.0018 (5) |
| C19 | 0.0212 (7) | 0.0212 (7) | 0.0128 (5) | 0.0008 (6) | 0.0005 (5) | −0.0010 (5) |
| C20 | 0.0207 (7) | 0.0179 (7) | 0.0136 (5) | −0.0005 (6) | 0.0001 (5) | 0.0018 (5) |
| S1—C18 | 1.8173 (15) | C9—H9A | 0.9300 |
| S1—C17 | 1.8200 (14) | C10—C11 | 1.4301 (19) |
| S2—C20 | 1.8200 (15) | C11—C12 | 1.3557 (18) |
| S2—C17 | 1.8214 (13) | C11—H11A | 0.9300 |
| C1—C10 | 1.418 (2) | C12—C13 | 1.4373 (19) |
| C1—C6 | 1.4260 (18) | C12—H12A | 0.9300 |
| C1—C2 | 1.4328 (17) | C13—C14 | 1.4191 (17) |
| C2—C3 | 1.4239 (19) | C14—C15 | 1.397 (2) |
| C2—C13 | 1.4242 (17) | C14—C17 | 1.5144 (18) |
| C3—C16 | 1.4024 (18) | C15—C16 | 1.3884 (19) |
| C3—C4 | 1.4349 (19) | C15—H15A | 0.9300 |
| C4—C5 | 1.3521 (19) | C16—H16A | 0.9300 |
| C4—H4A | 0.9300 | C17—H17A | 0.9800 |
| C5—C6 | 1.432 (2) | C18—C19 | 1.5298 (19) |
| C5—H5A | 0.9300 | C18—H18A | 0.9700 |
| C6—C7 | 1.4047 (18) | C18—H18B | 0.9700 |
| C7—C8 | 1.384 (2) | C19—C20 | 1.523 (2) |
| C7—H7A | 0.9300 | C19—H19A | 0.9700 |
| C8—C9 | 1.389 (2) | C19—H19B | 0.9700 |
| C8—H8A | 0.9300 | C20—H20A | 0.9700 |
| C9—C10 | 1.4025 (18) | C20—H20B | 0.9700 |
| C18—S1—C17 | 98.54 (7) | C13—C12—H12A | 119.4 |
| C20—S2—C17 | 97.23 (6) | C14—C13—C2 | 118.82 (12) |
| C10—C1—C6 | 119.86 (11) | C14—C13—C12 | 122.81 (12) |
| C10—C1—C2 | 120.01 (12) | C2—C13—C12 | 118.34 (11) |
| C6—C1—C2 | 120.09 (12) | C15—C14—C13 | 119.42 (12) |
| C3—C2—C13 | 120.81 (11) | C15—C14—C17 | 120.80 (11) |
| C3—C2—C1 | 119.16 (12) | C13—C14—C17 | 119.77 (12) |
| C13—C2—C1 | 120.00 (12) | C16—C15—C14 | 121.66 (12) |
| C16—C3—C2 | 118.55 (12) | C16—C15—H15A | 119.2 |
| C16—C3—C4 | 122.18 (13) | C14—C15—H15A | 119.2 |
| C2—C3—C4 | 119.21 (12) | C15—C16—C3 | 120.69 (13) |
| C5—C4—C3 | 121.43 (14) | C15—C16—H16A | 119.7 |
| C5—C4—H4A | 119.3 | C3—C16—H16A | 119.7 |
| C3—C4—H4A | 119.3 | C14—C17—S1 | 109.24 (9) |
| C4—C5—C6 | 121.17 (13) | C14—C17—S2 | 111.75 (9) |
| C4—C5—H5A | 119.4 | S1—C17—S2 | 112.20 (7) |
| C6—C5—H5A | 119.4 | C14—C17—H17A | 107.8 |
| C7—C6—C1 | 118.64 (13) | S1—C17—H17A | 107.8 |
| C7—C6—C5 | 122.46 (12) | S2—C17—H17A | 107.8 |
| C1—C6—C5 | 118.89 (11) | C19—C18—S1 | 114.16 (10) |
| C8—C7—C6 | 121.05 (13) | C19—C18—H18A | 108.7 |
| C8—C7—H7A | 119.5 | S1—C18—H18A | 108.7 |
| C6—C7—H7A | 119.5 | C19—C18—H18B | 108.7 |
| C7—C8—C9 | 120.58 (13) | S1—C18—H18B | 108.7 |
| C7—C8—H8A | 119.7 | H18A—C18—H18B | 107.6 |
| C9—C8—H8A | 119.7 | C20—C19—C18 | 113.57 (11) |
| C8—C9—C10 | 120.51 (14) | C20—C19—H19A | 108.9 |
| C8—C9—H9A | 119.7 | C18—C19—H19A | 108.9 |
| C10—C9—H9A | 119.7 | C20—C19—H19B | 108.9 |
| C9—C10—C1 | 119.35 (13) | C18—C19—H19B | 108.9 |
| C9—C10—C11 | 122.04 (13) | H19A—C19—H19B | 107.7 |
| C1—C10—C11 | 118.60 (11) | C19—C20—S2 | 114.65 (10) |
| C12—C11—C10 | 121.71 (13) | C19—C20—H20A | 108.6 |
| C12—C11—H11A | 119.1 | S2—C20—H20A | 108.6 |
| C10—C11—H11A | 119.1 | C19—C20—H20B | 108.6 |
| C11—C12—C13 | 121.29 (13) | S2—C20—H20B | 108.6 |
| C11—C12—H12A | 119.4 | H20A—C20—H20B | 107.6 |
| C10—C1—C2—C3 | −178.01 (12) | C10—C11—C12—C13 | −1.0 (2) |
| C6—C1—C2—C3 | −0.47 (19) | C3—C2—C13—C14 | 1.21 (19) |
| C10—C1—C2—C13 | −0.20 (19) | C1—C2—C13—C14 | −176.56 (12) |
| C6—C1—C2—C13 | 177.34 (12) | C3—C2—C13—C12 | 179.43 (12) |
| C13—C2—C3—C16 | −1.84 (19) | C1—C2—C13—C12 | 1.66 (19) |
| C1—C2—C3—C16 | 175.95 (13) | C11—C12—C13—C14 | 177.07 (13) |
| C13—C2—C3—C4 | −179.16 (13) | C11—C12—C13—C2 | −1.1 (2) |
| C1—C2—C3—C4 | −1.37 (19) | C2—C13—C14—C15 | 0.97 (19) |
| C16—C3—C4—C5 | −175.68 (14) | C12—C13—C14—C15 | −177.17 (13) |
| C2—C3—C4—C5 | 1.5 (2) | C2—C13—C14—C17 | 179.86 (12) |
| C3—C4—C5—C6 | 0.2 (2) | C12—C13—C14—C17 | 1.7 (2) |
| C10—C1—C6—C7 | 0.25 (19) | C13—C14—C15—C16 | −2.6 (2) |
| C2—C1—C6—C7 | −177.30 (13) | C17—C14—C15—C16 | 178.56 (12) |
| C10—C1—C6—C5 | 179.72 (13) | C14—C15—C16—C3 | 1.9 (2) |
| C2—C1—C6—C5 | 2.17 (19) | C2—C3—C16—C15 | 0.3 (2) |
| C4—C5—C6—C7 | 177.38 (14) | C4—C3—C16—C15 | 177.52 (13) |
| C4—C5—C6—C1 | −2.1 (2) | C15—C14—C17—S1 | 93.99 (13) |
| C1—C6—C7—C8 | 0.3 (2) | C13—C14—C17—S1 | −84.88 (13) |
| C5—C6—C7—C8 | −179.18 (13) | C15—C14—C17—S2 | −30.77 (16) |
| C6—C7—C8—C9 | −0.2 (2) | C13—C14—C17—S2 | 150.36 (10) |
| C7—C8—C9—C10 | −0.5 (2) | C18—S1—C17—C14 | 171.69 (9) |
| C8—C9—C10—C1 | 1.0 (2) | C18—S1—C17—S2 | −63.82 (9) |
| C8—C9—C10—C11 | 179.45 (13) | C20—S2—C17—C14 | −172.85 (9) |
| C6—C1—C10—C9 | −0.88 (19) | C20—S2—C17—S1 | 64.05 (8) |
| C2—C1—C10—C9 | 176.67 (13) | C17—S1—C18—C19 | 59.16 (12) |
| C6—C1—C10—C11 | −179.38 (13) | S1—C18—C19—C20 | −63.42 (15) |
| C2—C1—C10—C11 | −1.83 (19) | C18—C19—C20—S2 | 65.04 (15) |
| C9—C10—C11—C12 | −175.99 (14) | C17—S2—C20—C19 | −61.20 (11) |
| C1—C10—C11—C12 | 2.5 (2) |
| H··· | ||||
| C15—H15A···S2 | 0.93 | 2.65 | 3.0416 (13) | 106 |
| C9—H9A···Cg1i | 0.93 | 2.68 | 3.4196 (15) | 137 |
| C4—H4A···Cg2ii | 0.93 | 2.98 | 3.8073 (16) | 149 |
| C20—H20A···Cg3iii | 0.97 | 2.78 | 3.5339 (15) | 135 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C15—H15 | 0.93 | 2.65 | 3.0416 (13) | 106 |
| C9—H9 | 0.93 | 2.68 | 3.4196 (15) | 137 |
| C4—H4 | 0.93 | 2.98 | 3.8073 (16) | 149 |
| C20—H20 | 0.97 | 2.78 | 3.5339 (15) | 135 |
Symmetry codes: (i) ; (ii) ; (iii) . Cg1 is the centroid of the C1–C6 ring, Cg2 is the centroid of the C1/C6–C10 ring and Cg3 is the centroid of the C2/C3/C13–C16 ring.