Literature DB >> 21582512

Hydroxonium 1-ammonio-ethane-1,1-diyl-diphospho-nate.

Ming Li1, Wen Wen, Wuzu Ha, Liang Chang.   

Abstract

The title complex, H(3)O(+)·NH(3)C(CH(3))(PO(3)H)(2) (-), contains a hydroxonium ion and an NH(3)C(CH(3))(PO(3)H)(2) (-) anion. The three H atoms of H(3)O(+) form a pseudo-tetra-hedron by being distributed over four positions with occupation factors of 0.75. Multiple N-H⋯O and O-H⋯O hydrogen bonds in the crystal structure form an intricate three-dimensional supra-molecular network.

Entities:  

Year:  2009        PMID: 21582512      PMCID: PMC2968973          DOI: 10.1107/S1600536809008770

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structures of organophospho­nates, see: Clearfield (2002 ▶); Finn et al. (2003 ▶). For similar bis­phospho­nates, see: Fernández et al. (2003 ▶); For complexes with 1-amino­ethyl­idene-1,1-diphospho­nic acid, see: Yin et al. (2005 ▶); Ding et al. (2006 ▶); Li et al. (2008 ▶). For the synthesis, see: Chai et al. (1980 ▶).

Experimental

Crystal data

H3O+·C2H8N2O6P2 − M = 223.06 Monoclinic, a = 7.3372 (6) Å b = 10.6553 (8) Å c = 10.6128 (8) Å β = 97.705 (1)° V = 822.22 (11) Å3 Z = 4 Mo Kα radiation μ = 0.53 mm−1 T = 293 K 0.36 × 0.27 × 0.18 mm

Data collection

Bruker SMART 4K CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2008a ▶) T min = 0.831, T max = 0.910 5340 measured reflections 1972 independent reflections 1837 reflections with I > 2σ(I) R int = 0.015

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.097 S = 1.10 1972 reflections 136 parameters 4 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.40 e Å−3 Δρmin = −0.61 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008b ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008b ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809008770/rn2053sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809008770/rn2053Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
H3O+·C2H8N2O6P2F(000) = 464
Mr = 223.06Dx = 1.802 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3640 reflections
a = 7.3372 (6) Åθ = 2.7–29.8°
b = 10.6553 (8) ŵ = 0.53 mm1
c = 10.6128 (8) ÅT = 293 K
β = 97.705 (1)°Plate, colorless
V = 822.22 (11) Å30.36 × 0.27 × 0.18 mm
Z = 4
Bruker SMART 4K CCD area-detector diffractometer1837 reflections with I > 2σ(I)
graphiteRint = 0.015
φ and ω scansθmax = 28.0°, θmin = 2.7°
Absorption correction: multi-scan (SADABS; Sheldrick, 2008a)h = −9→9
Tmin = 0.831, Tmax = 0.910k = −9→14
5340 measured reflectionsl = −13→11
1972 independent reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.032H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.097w = 1/[σ2(Fo2) + (0.0481P)2 + 0.8715P] where P = (Fo2 + 2Fc2)/3
S = 1.10(Δ/σ)max = 0.001
1972 reflectionsΔρmax = 0.40 e Å3
136 parametersΔρmin = −0.61 e Å3
4 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.023 (2)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/UeqOcc. (<1)
C10.9948 (2)0.56114 (16)0.24265 (16)0.0131 (3)
C20.9672 (3)0.62357 (19)0.36861 (18)0.0209 (4)
H2A1.07410.67220.39930.031*
H2B0.94880.56020.42990.031*
H2C0.86150.67740.35560.031*
N11.0165 (2)0.66564 (14)0.14939 (14)0.0152 (3)
H1A0.91510.71240.13910.023*
H1B1.03470.63290.07500.023*
H1C1.11240.71310.17920.023*
O1W0.4462 (2)0.70203 (18)0.52441 (17)0.0363 (4)
O10.63612 (19)0.57626 (13)0.17124 (14)0.0209 (3)
O20.75556 (18)0.37252 (13)0.27913 (13)0.0208 (3)
O30.80235 (18)0.42568 (13)0.05066 (12)0.0208 (3)
O41.23166 (19)0.41015 (14)0.13108 (14)0.0209 (3)
O51.20389 (18)0.37077 (13)0.35944 (13)0.0204 (3)
O61.36080 (17)0.56986 (13)0.29441 (13)0.0199 (3)
P10.78594 (6)0.47061 (4)0.18354 (4)0.01339 (15)
P21.21301 (6)0.47175 (4)0.26319 (4)0.01358 (15)
H31.227 (5)0.456 (3)0.079 (3)0.051 (10)*
H40.562 (5)0.568 (3)0.208 (3)0.049 (10)*
H50.5658 (17)0.698 (3)0.554 (3)0.018 (7)*0.75
H60.386 (4)0.673 (3)0.587 (2)0.018 (7)*0.75
H70.426 (4)0.663 (2)0.4485 (15)0.013 (7)*0.75
H80.422 (5)0.7827 (13)0.509 (4)0.038 (10)*0.75
U11U22U33U12U13U23
C10.0145 (7)0.0114 (7)0.0138 (7)−0.0006 (6)0.0032 (6)0.0007 (6)
C20.0254 (9)0.0214 (9)0.0164 (8)0.0030 (7)0.0042 (7)−0.0040 (7)
N10.0165 (7)0.0123 (7)0.0173 (7)−0.0002 (5)0.0040 (5)0.0017 (5)
O1W0.0356 (9)0.0393 (10)0.0331 (9)0.0008 (8)0.0010 (7)−0.0001 (7)
O10.0155 (6)0.0200 (7)0.0283 (7)0.0043 (5)0.0073 (5)0.0065 (5)
O20.0210 (6)0.0164 (6)0.0261 (7)0.0001 (5)0.0068 (5)0.0073 (5)
O30.0217 (6)0.0236 (7)0.0169 (6)−0.0005 (5)0.0022 (5)−0.0037 (5)
O40.0248 (7)0.0184 (7)0.0201 (7)0.0019 (5)0.0051 (5)−0.0036 (5)
O50.0191 (6)0.0189 (6)0.0227 (7)0.0010 (5)0.0005 (5)0.0066 (5)
O60.0148 (6)0.0193 (6)0.0259 (7)−0.0038 (5)0.0037 (5)−0.0049 (5)
P10.0127 (2)0.0124 (2)0.0152 (2)−0.00029 (15)0.00251 (16)0.00126 (15)
P20.0123 (2)0.0125 (2)0.0158 (2)0.00017 (15)0.00167 (16)0.00006 (15)
C1—N11.512 (2)O1W—H60.896 (10)
C1—C21.531 (2)O1W—H70.900 (10)
C1—P11.8479 (17)O1W—H80.888 (10)
C1—P21.8505 (17)O1—P11.5666 (14)
C2—H2A0.9600O1—H40.71 (3)
C2—H2B0.9600O2—P11.4940 (13)
C2—H2C0.9600O3—P11.5093 (13)
N1—H1A0.8900O4—P21.5706 (14)
N1—H1B0.8900O4—H30.73 (4)
N1—H1C0.8900O5—P21.4914 (13)
O1W—H50.893 (10)O6—P21.5106 (13)
N1—C1—C2106.82 (14)H5—O1W—H7109 (3)
N1—C1—P1108.51 (11)H6—O1W—H7118 (3)
C2—C1—P1108.82 (12)H5—O1W—H8106 (3)
N1—C1—P2106.91 (11)H6—O1W—H8111 (3)
C2—C1—P2109.54 (12)H7—O1W—H8106 (3)
P1—C1—P2115.87 (9)P1—O1—H4116 (3)
C1—C2—H2A109.5P2—O4—H3113 (3)
C1—C2—H2B109.5O2—P1—O3116.77 (8)
H2A—C2—H2B109.5O2—P1—O1113.10 (8)
C1—C2—H2C109.5O3—P1—O1107.04 (8)
H2A—C2—H2C109.5O2—P1—C1109.10 (8)
H2B—C2—H2C109.5O3—P1—C1108.44 (8)
C1—N1—H1A109.5O1—P1—C1101.18 (8)
C1—N1—H1B109.5O5—P2—O6116.47 (8)
H1A—N1—H1B109.5O5—P2—O4109.10 (8)
C1—N1—H1C109.5O6—P2—O4109.82 (8)
H1A—N1—H1C109.5O5—P2—C1109.54 (8)
H1B—N1—H1C109.5O6—P2—C1104.71 (8)
H5—O1W—H6107 (3)O4—P2—C1106.71 (8)
N1—C1—P1—O2−176.13 (11)N1—C1—P2—O5177.18 (11)
C2—C1—P1—O2−60.25 (14)C2—C1—P2—O561.79 (14)
P2—C1—P1—O263.66 (11)P1—C1—P2—O5−61.75 (11)
N1—C1—P1—O355.70 (13)N1—C1—P2—O651.57 (12)
C2—C1—P1—O3171.58 (12)C2—C1—P2—O6−63.82 (13)
P2—C1—P1—O3−64.51 (11)P1—C1—P2—O6172.64 (9)
N1—C1—P1—O1−56.68 (12)N1—C1—P2—O4−64.85 (12)
C2—C1—P1—O159.20 (13)C2—C1—P2—O4179.76 (12)
P2—C1—P1—O1−176.89 (9)P1—C1—P2—O456.22 (11)
D—H···AD—HH···AD···AD—H···A
N1—H1C···O2i0.891.982.809 (2)155
N1—H1A···O5i0.891.902.713 (2)151
N1—H1B···O3ii0.892.012.824 (2)152
O4—H3···O3ii0.73 (4)1.86 (4)2.591 (2)176 (4)
O1—H4···O6iii0.71 (3)1.84 (3)2.550 (2)172 (4)
O1W—H5···O5iv0.89 (1)1.95 (2)2.804 (2)159 (3)
O1W—H8···O1v0.89 (1)2.64 (4)3.061 (2)110 (3)
O1W—H8···O3vi0.89 (1)2.27 (2)3.041 (2)145 (3)
O1W—H6···O2vii0.90 (1)1.94 (1)2.828 (2)175 (3)
O1W—H7···O6iii0.90 (1)1.92 (1)2.815 (2)173 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1C⋯O2i0.891.982.809 (2)155
N1—H1A⋯O5i0.891.902.713 (2)151
N1—H1B⋯O3ii0.892.012.824 (2)152
O4—H3⋯O3ii0.73 (4)1.86 (4)2.591 (2)176 (4)
O1—H4⋯O6iii0.71 (3)1.84 (3)2.550 (2)172 (4)
O1W—H5⋯O5iv0.893 (10)1.954 (15)2.804 (2)159 (3)
O1W—H8⋯O1v0.888 (10)2.64 (4)3.061 (2)110 (3)
O1W—H8⋯O3vi0.888 (10)2.27 (2)3.041 (2)145 (3)
O1W—H6⋯O2vii0.896 (10)1.935 (11)2.828 (2)175 (3)
O1W—H7⋯O6iii0.900 (10)1.920 (11)2.815 (2)173 (3)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) .

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