Literature DB >> 21582479

N,N'-Bis(4-bromo-benzyl-idene)-2,2-dimethyl-propane-1,3-diamine.

Reza Kia, Hoong-Kun Fun, Hadi Kargar.   

Abstract

The mol-ecule of the title compound, C(19)H(20)Br(2)N(2), is a potential bidentate Schiff base ligand. The two benzene rings are inclined at a dihedral angle of 30.85 (8)°. An inter-esting feature of the crystal structure is a weak inter-molecular BrBr [3.4752 (4) Å] inter-action which is shorter than the sum of the van der Waals radii of the Br atoms and links neighbouring mol-ecules into chains along the c axis. The crystal structure is further stabilized by inter-molecular C-H⋯π inter-actions.

Entities:  

Year:  2009        PMID: 21582479      PMCID: PMC2968840          DOI: 10.1107/S1600536809008113

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For details of hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For related structure see, for example: Li et al. (2005 ▶); Bomfim et al. (2005 ▶); Glidewell et al. (2005 ▶, 2006 ▶); Sun et al. (2004 ▶); Fun et al. (2008 ▶). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C19H20Br2N2 M = 436.19 Orthorhombic, a = 5.6687 (1) Å b = 7.7919 (2) Å c = 41.5932 (9) Å V = 1837.17 (7) Å3 Z = 4 Mo Kα radiation μ = 4.41 mm−1 T = 100 K 0.45 × 0.44 × 0.12 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (; Bruker, 2005 ▶) T min = 0.229, T max = 0.586 38732 measured reflections 9454 independent reflections 7585 reflections with I > 2σ(I) R int = 0.049

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.079 S = 1.03 9454 reflections 208 parameters H-atom parameters constrained Δρmax = 1.04 e Å−3 Δρmin = −0.61 e Å−3 Absolute structure: Flack (1983 ▶), 3971 Friedel pairs Flack parameter: 0.019 (6) Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809008113/at2737sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809008113/at2737Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H20Br2N2F(000) = 872
Mr = 436.19Dx = 1.577 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 9987 reflections
a = 5.6687 (1) Åθ = 2.7–35.5°
b = 7.7919 (2) ŵ = 4.41 mm1
c = 41.5932 (9) ÅT = 100 K
V = 1837.17 (7) Å3Block, colourless
Z = 40.45 × 0.44 × 0.12 mm
Bruker SMART APEXII CCD area-detector diffractometer9454 independent reflections
Radiation source: fine-focus sealed tube7585 reflections with I > 2σ(I)
graphiteRint = 0.049
φ and ω scansθmax = 37.5°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −9→9
Tmin = 0.229, Tmax = 0.586k = −10→13
38732 measured reflectionsl = −71→55
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.037H-atom parameters constrained
wR(F2) = 0.079w = 1/[σ2(Fo2) + (0.0316P)2 + 0.2032P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max = 0.011
9454 reflectionsΔρmax = 1.04 e Å3
208 parametersΔρmin = −0.60 e Å3
0 restraintsAbsolute structure: Flack (1983), 3971 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.019 (6)
Experimental. The crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br11.59060 (4)0.70918 (3)0.679860 (5)0.03041 (5)
Br21.02132 (3)0.35735 (2)1.095005 (4)0.02216 (4)
N10.9734 (3)0.7039 (2)0.82239 (4)0.0214 (3)
N20.8180 (3)0.6175 (2)0.93830 (4)0.0198 (3)
C11.0509 (3)0.5599 (2)0.74067 (5)0.0203 (3)
H1A0.90620.49910.73880.024*
C21.1894 (4)0.5835 (3)0.71353 (5)0.0219 (3)
H2A1.14100.54030.69320.026*
C31.4013 (3)0.6720 (2)0.71684 (4)0.0212 (3)
C41.4767 (3)0.7348 (2)0.74652 (4)0.0197 (3)
H4A1.62300.79350.74840.024*
C51.3353 (3)0.7104 (3)0.77327 (4)0.0184 (3)
H5A1.38480.75280.79360.022*
C61.1191 (3)0.6235 (2)0.77059 (4)0.0180 (3)
C70.9574 (3)0.6067 (2)0.79820 (5)0.0198 (3)
H7A0.83860.52080.79780.024*
C80.8001 (3)0.6814 (3)0.84805 (4)0.0209 (3)
H8A0.69960.58080.84320.025*
H8B0.69720.78390.84910.025*
C90.9225 (3)0.6548 (2)0.88094 (4)0.0179 (3)
C100.7242 (3)0.6457 (2)0.90606 (4)0.0188 (3)
H10A0.63330.75420.90570.023*
H10B0.61520.55100.90050.023*
C110.6955 (3)0.5293 (2)0.95790 (4)0.0178 (3)
H11A0.54860.48410.95090.021*
C120.7732 (3)0.4951 (2)0.99097 (4)0.0165 (3)
C130.6324 (3)0.3938 (2)1.01110 (5)0.0184 (3)
H13A0.48610.35141.00330.022*
C140.7025 (3)0.3543 (3)1.04224 (4)0.0196 (3)
H14A0.60500.28671.05580.024*
C150.9177 (3)0.4158 (2)1.05301 (4)0.0184 (3)
C161.0606 (3)0.5189 (2)1.03375 (4)0.0192 (3)
H16A1.20630.56161.04170.023*
C170.9877 (3)0.5583 (2)1.00290 (4)0.0193 (3)
H17A1.08380.62890.98970.023*
C181.0856 (3)0.8053 (3)0.88844 (5)0.0241 (4)
H18A1.16150.78660.90930.036*
H18B0.99350.91170.88910.036*
H18C1.20650.81420.87170.036*
C191.0619 (4)0.4868 (3)0.88061 (5)0.0244 (4)
H19A1.13930.47060.90150.037*
H19B1.18160.49130.86360.037*
H19C0.95440.39080.87650.037*
U11U22U33U12U13U23
Br10.02919 (10)0.04538 (12)0.01667 (8)0.00266 (9)0.00467 (7)0.00429 (9)
Br20.02804 (9)0.02117 (7)0.01728 (8)−0.00042 (7)−0.00430 (7)0.00085 (7)
N10.0223 (6)0.0248 (7)0.0169 (6)−0.0017 (6)0.0014 (6)0.0021 (6)
N20.0204 (7)0.0234 (8)0.0155 (7)0.0001 (6)0.0011 (5)0.0003 (6)
C10.0215 (8)0.0207 (8)0.0189 (8)0.0001 (6)−0.0015 (6)−0.0033 (6)
C20.0239 (8)0.0251 (8)0.0168 (8)0.0028 (7)−0.0041 (7)−0.0041 (7)
C30.0228 (7)0.0233 (9)0.0176 (8)0.0044 (6)0.0029 (6)0.0023 (6)
C40.0183 (7)0.0218 (7)0.0190 (7)−0.0006 (6)0.0004 (6)0.0019 (6)
C50.0194 (7)0.0208 (8)0.0150 (7)−0.0003 (7)−0.0011 (6)−0.0011 (7)
C60.0209 (7)0.0170 (8)0.0161 (7)0.0012 (6)0.0000 (6)0.0006 (6)
C70.0178 (7)0.0216 (8)0.0199 (8)−0.0008 (6)−0.0005 (6)0.0034 (6)
C80.0181 (7)0.0277 (10)0.0168 (8)−0.0001 (6)0.0012 (6)0.0024 (7)
C90.0160 (7)0.0201 (7)0.0175 (7)0.0003 (6)0.0006 (5)0.0009 (6)
C100.0186 (7)0.0221 (7)0.0157 (7)−0.0007 (6)−0.0008 (6)0.0019 (8)
C110.0191 (7)0.0186 (8)0.0157 (7)−0.0003 (6)0.0002 (6)−0.0017 (6)
C120.0181 (7)0.0161 (7)0.0152 (7)0.0006 (6)0.0006 (6)−0.0013 (6)
C130.0166 (7)0.0197 (8)0.0189 (8)−0.0009 (6)0.0002 (6)−0.0003 (6)
C140.0206 (7)0.0205 (7)0.0178 (8)−0.0013 (7)0.0020 (6)0.0015 (7)
C150.0226 (8)0.0186 (7)0.0141 (7)0.0027 (6)−0.0013 (6)−0.0020 (6)
C160.0176 (8)0.0191 (7)0.0208 (8)−0.0016 (6)0.0004 (6)−0.0026 (6)
C170.0206 (7)0.0192 (7)0.0180 (7)−0.0022 (7)0.0004 (7)−0.0009 (6)
C180.0212 (8)0.0259 (9)0.0251 (9)−0.0045 (7)0.0019 (7)−0.0011 (8)
C190.0246 (9)0.0235 (8)0.0250 (9)0.0057 (7)0.0037 (7)0.0021 (7)
Br1—C31.8978 (19)C9—C191.529 (3)
Br2—C151.8983 (18)C9—C101.536 (2)
N1—C71.263 (2)C10—H10A0.9900
N1—C81.462 (2)C10—H10B0.9900
N2—C111.272 (2)C11—C121.469 (3)
N2—C101.459 (2)C11—H11A0.9500
C1—C21.387 (3)C12—C131.400 (3)
C1—C61.394 (3)C12—C171.402 (3)
C1—H1A0.9500C13—C141.389 (3)
C2—C31.392 (3)C13—H13A0.9500
C2—H2A0.9500C14—C151.385 (3)
C3—C41.395 (3)C14—H14A0.9500
C4—C51.384 (2)C15—C161.394 (3)
C4—H4A0.9500C16—C171.383 (3)
C5—C61.404 (3)C16—H16A0.9500
C5—H5A0.9500C17—H17A0.9500
C6—C71.475 (3)C18—H18A0.9800
C7—H7A0.9500C18—H18B0.9800
C8—C91.548 (3)C18—H18C0.9800
C8—H8A0.9900C19—H19A0.9800
C8—H8B0.9900C19—H19B0.9800
C9—C181.525 (3)C19—H19C0.9800
C7—N1—C8117.50 (17)C9—C10—H10A109.3
C11—N2—C10118.11 (16)N2—C10—H10B109.3
C2—C1—C6121.48 (17)C9—C10—H10B109.3
C2—C1—H1A119.3H10A—C10—H10B108.0
C6—C1—H1A119.3N2—C11—C12122.30 (17)
C1—C2—C3118.26 (18)N2—C11—H11A118.9
C1—C2—H2A120.9C12—C11—H11A118.9
C3—C2—H2A120.9C13—C12—C17118.72 (17)
C2—C3—C4121.73 (18)C13—C12—C11119.43 (16)
C2—C3—Br1118.89 (15)C17—C12—C11121.84 (17)
C4—C3—Br1119.37 (14)C14—C13—C12121.29 (17)
C5—C4—C3119.03 (17)C14—C13—H13A119.4
C5—C4—H4A120.5C12—C13—H13A119.4
C3—C4—H4A120.5C15—C14—C13118.47 (17)
C4—C5—C6120.53 (16)C15—C14—H14A120.8
C4—C5—H5A119.7C13—C14—H14A120.8
C6—C5—H5A119.7C14—C15—C16121.70 (17)
C1—C6—C5118.96 (16)C14—C15—Br2119.15 (14)
C1—C6—C7119.40 (17)C16—C15—Br2119.15 (14)
C5—C6—C7121.56 (16)C17—C16—C15119.17 (17)
N1—C7—C6121.50 (17)C17—C16—H16A120.4
N1—C7—H7A119.3C15—C16—H16A120.4
C6—C7—H7A119.3C16—C17—C12120.63 (17)
N1—C8—C9111.10 (15)C16—C17—H17A119.7
N1—C8—H8A109.4C12—C17—H17A119.7
C9—C8—H8A109.4C9—C18—H18A109.5
N1—C8—H8B109.4C9—C18—H18B109.5
C9—C8—H8B109.4H18A—C18—H18B109.5
H8A—C8—H8B108.0C9—C18—H18C109.5
C18—C9—C19110.28 (15)H18A—C18—H18C109.5
C18—C9—C10109.88 (15)H18B—C18—H18C109.5
C19—C9—C10110.16 (15)C9—C19—H19A109.5
C18—C9—C8110.46 (16)C9—C19—H19B109.5
C19—C9—C8109.78 (16)H19A—C19—H19B109.5
C10—C9—C8106.20 (14)C9—C19—H19C109.5
N2—C10—C9111.43 (14)H19A—C19—H19C109.5
N2—C10—H10A109.3H19B—C19—H19C109.5
C6—C1—C2—C30.4 (3)C11—N2—C10—C9−146.93 (17)
C1—C2—C3—C40.7 (3)C18—C9—C10—N2−61.5 (2)
C1—C2—C3—Br1−178.88 (14)C19—C9—C10—N260.2 (2)
C2—C3—C4—C5−0.9 (3)C8—C9—C10—N2178.99 (16)
Br1—C3—C4—C5178.64 (14)C10—N2—C11—C12−179.41 (16)
C3—C4—C5—C60.1 (3)N2—C11—C12—C13−178.58 (17)
C2—C1—C6—C5−1.2 (3)N2—C11—C12—C170.2 (3)
C2—C1—C6—C7175.36 (17)C17—C12—C13—C14−0.6 (3)
C4—C5—C6—C10.9 (3)C11—C12—C13—C14178.16 (17)
C4—C5—C6—C7−175.54 (17)C12—C13—C14—C15−0.8 (3)
C8—N1—C7—C6177.89 (16)C13—C14—C15—C161.7 (3)
C1—C6—C7—N1−157.81 (18)C13—C14—C15—Br2−178.06 (14)
C5—C6—C7—N118.7 (3)C14—C15—C16—C17−1.2 (3)
C7—N1—C8—C9126.29 (18)Br2—C15—C16—C17178.54 (14)
N1—C8—C9—C1857.0 (2)C15—C16—C17—C12−0.2 (3)
N1—C8—C9—C19−64.8 (2)C13—C12—C17—C161.1 (3)
N1—C8—C9—C10176.10 (15)C11—C12—C17—C16−177.63 (17)
D—H···AD—HH···AD···AD—H···A
C18—H18C···N10.982.592.929 (3)101
C4—H4A···Cg1i0.952.853.5630 (18)132
C13—H13A···Cg2ii0.952.743.4648 (18)134
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C4—H4ACg1i0.952.853.5630 (18)132
C13—H13ACg2ii0.952.743.4648 (18)134

Symmetry codes: (i) ; (ii) . Cg1 and Cg2 are the centroids of the C1–C6 and C9–C17 benzene rings, respectively.

  5 in total

1.  Three-dimensional supramolecular structures in (E,E)-N,N'-bis(4-nitrobenzylidene)butane-1,4-diamine and (E,E)-N,N'-bis(4-nitrobenzylidene)hexane-1,6-diamine.

Authors:  Christopher Glidewell; John N Low; Janet M S Skakle; James L Wardell
Journal:  Acta Crystallogr C       Date:  2005-12-10       Impact factor: 1.172

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  pi-Stacked hydrogen-bonded sheets in N,N'-bis(4-nitrobenzylidene)ethane-1,2-diamine and pi-stacked hydrogen-bonded chains in N,N'-bis(4-nitrobenzylidene)propane-1,3-diamine.

Authors:  Joao A S Bomfim; James L Wardell; John N Low; Janet M S Skakle; Christopher Glidewell
Journal:  Acta Crystallogr C       Date:  2004-12-18       Impact factor: 1.172

4.  4,4'-[2,2-Dimethyl-propane-1,3-diyl-bis(nitrilo-methyl-idyne)]dibenzonitrile.

Authors:  Hoong-Kun Fun; Hadi Kargar; Reza Kia
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-06-19

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total

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