Literature DB >> 21582446

Choline dihydrogen phosphate.

Kyoko Fujita, Douglas R Macfarlane, Keiichi Noguchi, Hiroyuki Ohno.   

Abstract

In the cystal structure of the title compound, (2-hy-droxy-ethyl)trimethylammonium dihydrogen phosphate, C(5)H(14)NO(+)·H(2)PO(4) (-), two anions create dimeric structures via two O-H⋯O hydrogen bonds. The hydrogen-bonded dimers are connected by another O-H⋯O hydrogen bond with the hydroxyl groups of the cations, constructing a columner structure along the a axis. A number of C-H⋯O interactions are also present.

Entities:  

Year:  2009        PMID: 21582446      PMCID: PMC2969078          DOI: 10.1107/S1600536809007259

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to ionic liquids, see: Byrne et al. (2007 ▶); Fujita et al. (2005 ▶); Ohno (2005 ▶); van Rantwijk et al. (2003 ▶); Seddon (1997 ▶); Wasserscheid & Welton (2002 ▶); Welton (1999 ▶); Zhao et al. (2008 ▶).

Experimental

Crystal data

C5H14NOH2PO4 M = 201.16 Triclinic, a = 6.9232 (3) Å b = 8.2807 (4) Å c = 9.2333 (3) Å α = 84.458 (3)° β = 71.414 (3)° γ = 70.758 (3)° V = 473.68 (4) Å3 Z = 2 Cu Kα radiation μ = 2.55 mm−1 T = 193 K 0.60 × 0.10 × 0.02 mm

Data collection

Rigaku RAXIS-RAPID diffractometer Absorption correction: numerical (NUMABS; Higashi, 1999 ▶) T min = 0.429, T max = 0.950 8717 measured reflections 1714 independent reflections 1344 reflections with I > 2σ(I) R int = 0.053

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.121 S = 1.12 1714 reflections 124 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.21 e Å−3 Δρmin = −0.38 e Å−3 Data collection: PROCESS-AUTO (Rigaku, 1998 ▶); cell refinement: PROCESS-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2004 ▶); program(s) used to solve structure: SIR2004 (Burla et al., 2005 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPIII (Burnett & Johnson (1996 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809007259/at2730sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809007259/at2730Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C5H14NO+·H2PO4Z = 2
Mr = 201.16F(000) = 216
Triclinic, P1Dx = 1.410 Mg m3
Hall symbol: -P 1Melting point: 392 K
a = 6.9232 (3) ÅCu Kα radiation, λ = 1.54187 Å
b = 8.2807 (4) ÅCell parameters from 6930 reflections
c = 9.2333 (3) Åθ = 5.1–68.3°
α = 84.458 (3)°µ = 2.55 mm1
β = 71.414 (3)°T = 193 K
γ = 70.758 (3)°Platelet, colourless
V = 473.68 (4) Å30.60 × 0.10 × 0.02 mm
Rigaku RAXIS-RAPID diffractometer1714 independent reflections
Radiation source: rotating anode1344 reflections with I > 2σ(I)
graphiteRint = 0.053
Detector resolution: 10.00 pixels mm-1θmax = 68.3°, θmin = 5.1°
ω scansh = −8→8
Absorption correction: numerical (NUMABS; Higashi, 1999)k = −9→9
Tmin = 0.429, Tmax = 0.950l = −11→11
8717 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.042Hydrogen site location: difference Fourier map
wR(F2) = 0.121H atoms treated by a mixture of independent and constrained refinement
S = 1.12w = 1/[σ2(Fo2) + (0.0626P)2 + 0.050P] where P = (Fo2 + 2Fc2)/3
1714 reflections(Δ/σ)max < 0.001
124 parametersΔρmax = 0.21 e Å3
0 restraintsΔρmin = −0.38 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
P10.81645 (9)0.68990 (7)0.17447 (6)0.0335 (2)
O10.5777 (2)0.7534 (2)0.24514 (18)0.0430 (5)
O20.9220 (3)0.50241 (19)0.19693 (17)0.0439 (5)
O30.9039 (3)0.8007 (2)0.25187 (19)0.0390 (4)
O40.8798 (3)0.7343 (2)0.00080 (18)0.0406 (4)
O50.7017 (3)0.2172 (2)−0.10979 (19)0.0452 (5)
N10.4405 (3)0.2917 (2)0.3125 (2)0.0340 (5)
C10.5122 (4)0.3227 (3)0.1424 (2)0.0342 (5)
H1A0.59780.40200.12270.041*
H1B0.38320.38010.10960.041*
C20.6444 (4)0.1635 (3)0.0453 (2)0.0391 (6)
H2A0.77500.10350.07550.047*
H2B0.55960.08440.05840.047*
C30.3093 (4)0.4616 (3)0.3894 (3)0.0417 (6)
H3A0.18210.51040.35470.050*
H3B0.39580.53910.36330.050*
H3C0.26400.44640.50030.050*
C40.3029 (4)0.1774 (3)0.3487 (3)0.0458 (7)
H4A0.18360.22570.30570.055*
H4B0.24580.16810.45970.055*
H4C0.38930.06360.30420.055*
C50.6299 (4)0.2169 (3)0.3699 (3)0.0435 (6)
H5A0.71170.10240.32550.052*
H5B0.58050.20890.48150.052*
H5C0.72190.29020.34030.052*
H3O1.025 (5)0.793 (4)0.209 (3)0.058 (9)*
H4O0.959 (6)0.643 (5)−0.067 (4)0.096 (12)*
H5O0.597 (5)0.232 (4)−0.158 (4)0.090 (12)*
U11U22U33U12U13U23
P10.0331 (4)0.0388 (4)0.0280 (4)−0.0104 (3)−0.0088 (3)−0.0016 (2)
O10.0311 (9)0.0607 (12)0.0372 (9)−0.0139 (8)−0.0102 (7)−0.0032 (8)
O20.0622 (11)0.0359 (10)0.0292 (9)−0.0108 (8)−0.0130 (8)0.0003 (7)
O30.0323 (9)0.0490 (10)0.0363 (9)−0.0148 (8)−0.0066 (7)−0.0093 (7)
O40.0474 (10)0.0392 (10)0.0298 (9)−0.0082 (8)−0.0099 (7)−0.0009 (7)
O50.0372 (9)0.0728 (13)0.0290 (9)−0.0221 (9)−0.0102 (7)0.0022 (8)
N10.0408 (11)0.0326 (10)0.0299 (10)−0.0123 (8)−0.0125 (8)0.0028 (8)
C10.0372 (12)0.0396 (13)0.0284 (12)−0.0143 (10)−0.0124 (10)0.0042 (9)
C20.0421 (13)0.0476 (14)0.0282 (12)−0.0154 (11)−0.0103 (10)0.0001 (10)
C30.0476 (14)0.0366 (13)0.0340 (12)−0.0063 (11)−0.0097 (11)−0.0028 (10)
C40.0574 (16)0.0469 (15)0.0356 (13)−0.0284 (13)−0.0064 (11)0.0038 (11)
C50.0506 (15)0.0435 (14)0.0352 (13)−0.0045 (12)−0.0223 (11)0.0006 (11)
P1—O11.4969 (16)C1—H1A0.9900
P1—O21.5080 (16)C1—H1B0.9900
P1—O41.5629 (16)C2—H2A0.9900
P1—O31.5771 (17)C2—H2B0.9900
O3—H3O0.79 (3)C3—H3A0.9800
O4—H4O0.93 (4)C3—H3B0.9800
O5—C21.427 (3)C3—H3C0.9800
O5—H5O0.93 (4)C4—H4A0.9800
N1—C51.493 (3)C4—H4B0.9800
N1—C41.499 (3)C4—H4C0.9800
N1—C31.499 (3)C5—H5A0.9800
N1—C11.513 (3)C5—H5B0.9800
C1—C21.513 (3)C5—H5C0.9800
O1—P1—O2115.19 (10)C1—C2—H2A110.3
O1—P1—O4110.63 (9)O5—C2—H2B110.3
O2—P1—O4110.24 (9)C1—C2—H2B110.3
O1—P1—O3104.81 (9)H2A—C2—H2B108.6
O2—P1—O3109.78 (10)N1—C3—H3A109.5
O4—P1—O3105.63 (10)N1—C3—H3B109.5
P1—O3—H3O113 (2)H3A—C3—H3B109.5
P1—O4—H4O117 (2)N1—C3—H3C109.5
C2—O5—H5O114 (2)H3A—C3—H3C109.5
C5—N1—C4110.68 (19)H3B—C3—H3C109.5
C5—N1—C3108.80 (19)N1—C4—H4A109.5
C4—N1—C3108.66 (19)N1—C4—H4B109.5
C5—N1—C1110.65 (17)H4A—C4—H4B109.5
C4—N1—C1110.51 (18)N1—C4—H4C109.5
C3—N1—C1107.44 (16)H4A—C4—H4C109.5
N1—C1—C2114.88 (18)H4B—C4—H4C109.5
N1—C1—H1A108.5N1—C5—H5A109.5
C2—C1—H1A108.5N1—C5—H5B109.5
N1—C1—H1B108.5H5A—C5—H5B109.5
C2—C1—H1B108.5N1—C5—H5C109.5
H1A—C1—H1B107.5H5A—C5—H5C109.5
O5—C2—C1107.09 (19)H5B—C5—H5C109.5
O5—C2—H2A110.3
C5—N1—C1—C262.5 (3)C3—N1—C1—C2−178.9 (2)
C4—N1—C1—C2−60.5 (3)N1—C1—C2—O5−178.51 (17)
D—H···AD—HH···AD···AD—H···A
O3—H3O···O5i0.80 (4)1.79 (4)2.586 (3)178 (3)
O4—H4O···O2i0.93 (4)1.60 (4)2.526 (2)173 (3)
O5—H5O···O1ii0.93 (4)1.63 (4)2.556 (3)176 (4)
C3—H3B···O10.982.483.439 (3)166
C4—H4B···O3iii0.982.543.504 (3)170
C4—H4C···O1iv0.982.493.457 (3)168
C5—H5A···O3iv0.982.463.430 (3)172
C5—H5B···O1iii0.982.423.382 (3)169
C5—H5C···O20.982.603.549 (3)164
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3O⋯O5i0.80 (4)1.79 (4)2.586 (3)178 (3)
O4—H4O⋯O2i0.93 (4)1.60 (4)2.526 (2)173 (3)
O5—H5O⋯O1ii0.93 (4)1.63 (4)2.556 (3)176 (4)
C3—H3B⋯O10.982.483.439 (3)166
C4—H4B⋯O3iii0.982.543.504 (3)170
C4—H4C⋯O1iv0.982.493.457 (3)168
C5—H5A⋯O3iv0.982.463.430 (3)172
C5—H5B⋯O1iii0.982.423.382 (3)169
C5—H5C⋯O20.982.603.549 (3)164

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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