| Literature DB >> 21582432 |
Ai-E Shi1, Yan-Jun Hou, Yi-Ming Zhang, Guang-Feng Hou, Jin-Sheng Gao.
Abstract
The asymmetric unit of the title compound, C(14)H(14)N(4)·2H(2)O consists of two half-mol-ecules of the main mol-ecule, each situated on an inversion center, and two mol-ecules of water. One-dimensional chains of water mol-ecules are built up by O-H⋯O hydrogen bonds which are then linked with the main mol-ecule via O-H⋯N hydrogen bonds, forming a two-dimensional supra-molecular network in the ac plane.Entities:
Year: 2009 PMID: 21582432 PMCID: PMC2968890 DOI: 10.1107/S1600536809007521
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C14H14N4·2H2O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 8012 reflections |
| θ = 6.5–54.9° | |
| µ = 0.09 mm−1 | |
| β = 91.15 (2)° | Block, colorless |
| 0.29 × 0.27 × 0.19 mm | |
| Rigaku R-AXIS RAPID diffractometer | 3361 independent reflections |
| Radiation source: fine-focus sealed tube | 1735 reflections with |
| graphite | |
| ω scan | θmax = 27.5°, θmin = 3.3° |
| Absorption correction: multi-scan ( | |
| 14065 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3361 reflections | (Δ/σ)max < 0.001 |
| 181 parameters | Δρmax = 0.14 e Å−3 |
| 0 restraints | Δρmin = −0.13 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.8625 (5) | 0.35411 (10) | 0.69781 (13) | 0.0727 (6) | |
| H1 | 0.7584 | 0.3209 | 0.6680 | 0.087* | |
| C2 | 1.0682 (5) | 0.33893 (11) | 0.75233 (13) | 0.0784 (6) | |
| H2 | 1.1345 | 0.2939 | 0.7677 | 0.094* | |
| C3 | 1.1572 (4) | 0.40427 (12) | 0.77993 (12) | 0.0737 (6) | |
| H3 | 1.2983 | 0.4104 | 0.8187 | 0.088* | |
| C4 | 0.6675 (4) | 0.46818 (11) | 0.63845 (12) | 0.0709 (6) | |
| H4 | 0.6093 | 0.5124 | 0.6635 | 0.085* | |
| H5 | 0.4963 | 0.4419 | 0.6231 | 0.085* | |
| C5 | 0.8366 (3) | 0.48549 (9) | 0.56601 (11) | 0.0551 (4) | |
| C6 | 0.8351 (4) | 0.43987 (10) | 0.50232 (12) | 0.0642 (5) | |
| H6 | 0.7232 | 0.3987 | 0.5034 | 0.077* | |
| C7 | 1.0049 (4) | 0.54625 (9) | 0.56293 (11) | 0.0622 (5) | |
| H7 | 1.0099 | 0.5779 | 0.6053 | 0.075* | |
| C8 | 0.5827 (4) | 0.27680 (10) | −0.07594 (13) | 0.0724 (6) | |
| H8 | 0.6642 | 0.2909 | −0.1230 | 0.087* | |
| C9 | 0.3835 (5) | 0.22438 (10) | −0.06711 (15) | 0.0776 (6) | |
| H9 | 0.3016 | 0.1955 | −0.1061 | 0.093* | |
| C10 | 0.3302 (4) | 0.22347 (9) | 0.01191 (14) | 0.0706 (6) | |
| H10 | 0.2015 | 0.1925 | 0.0354 | 0.085* | |
| C11 | 0.8187 (4) | 0.36625 (9) | 0.01523 (13) | 0.0663 (5) | |
| H11 | 0.9808 | 0.3674 | −0.0195 | 0.080* | |
| H12 | 0.8916 | 0.3612 | 0.0688 | 0.080* | |
| C12 | 0.6550 (3) | 0.43624 (8) | 0.00771 (11) | 0.0527 (4) | |
| C13 | 0.6725 (4) | 0.47764 (9) | −0.05894 (11) | 0.0616 (5) | |
| H13 | 0.7898 | 0.4630 | −0.0995 | 0.074* | |
| C14 | 0.4809 (4) | 0.45945 (9) | 0.06678 (11) | 0.0624 (5) | |
| H14 | 0.4663 | 0.4324 | 0.1126 | 0.075* | |
| N1 | 0.8358 (3) | 0.42535 (8) | 0.69450 (8) | 0.0559 (4) | |
| N2 | 1.0191 (3) | 0.45779 (8) | 0.74505 (9) | 0.0660 (4) | |
| N3 | 0.6401 (3) | 0.30445 (7) | −0.00459 (10) | 0.0579 (4) | |
| N4 | 0.4843 (3) | 0.27223 (7) | 0.05120 (10) | 0.0638 (4) | |
| O1 | 0.4928 (3) | 0.31462 (7) | 0.21740 (9) | 0.0847 (4) | |
| H15 | 0.4939 | 0.3031 | 0.1690 | 0.127* | |
| H16 | 0.3374 | 0.3373 | 0.2238 | 0.127* | |
| O2 | 0.9966 (3) | 0.38581 (8) | 0.24291 (10) | 0.1062 (6) | |
| H17 | 0.9746 | 0.4311 | 0.2421 | 0.159* | |
| H18 | 0.8329 | 0.3663 | 0.2386 | 0.159* |
| C1 | 0.0920 (14) | 0.0568 (11) | 0.0693 (14) | −0.0064 (10) | 0.0027 (12) | 0.0032 (10) |
| C2 | 0.0967 (15) | 0.0713 (13) | 0.0674 (14) | 0.0235 (12) | 0.0093 (12) | 0.0138 (11) |
| C3 | 0.0689 (12) | 0.0959 (16) | 0.0562 (12) | 0.0135 (12) | −0.0021 (10) | 0.0092 (11) |
| C4 | 0.0529 (10) | 0.0895 (13) | 0.0704 (14) | 0.0117 (9) | 0.0054 (10) | 0.0187 (11) |
| C5 | 0.0413 (9) | 0.0633 (10) | 0.0605 (12) | 0.0094 (8) | −0.0013 (8) | 0.0145 (9) |
| C6 | 0.0646 (11) | 0.0599 (10) | 0.0679 (13) | −0.0089 (9) | −0.0060 (10) | 0.0122 (10) |
| C7 | 0.0708 (11) | 0.0571 (10) | 0.0587 (12) | 0.0052 (9) | −0.0026 (10) | 0.0019 (9) |
| C8 | 0.0854 (14) | 0.0656 (12) | 0.0664 (15) | 0.0127 (11) | 0.0027 (11) | 0.0025 (10) |
| C9 | 0.0921 (15) | 0.0559 (11) | 0.0839 (18) | 0.0042 (11) | −0.0177 (13) | −0.0075 (11) |
| C10 | 0.0695 (12) | 0.0487 (10) | 0.0935 (18) | −0.0009 (9) | 0.0001 (12) | 0.0009 (10) |
| C11 | 0.0505 (10) | 0.0544 (10) | 0.0936 (16) | 0.0012 (8) | −0.0073 (10) | 0.0040 (10) |
| C12 | 0.0423 (8) | 0.0491 (9) | 0.0665 (12) | −0.0049 (7) | −0.0047 (8) | 0.0034 (8) |
| C13 | 0.0599 (10) | 0.0607 (11) | 0.0646 (13) | 0.0022 (8) | 0.0130 (9) | 0.0007 (9) |
| C14 | 0.0708 (11) | 0.0570 (10) | 0.0596 (12) | 0.0019 (9) | 0.0029 (10) | 0.0135 (9) |
| N1 | 0.0495 (8) | 0.0641 (9) | 0.0543 (9) | 0.0008 (7) | 0.0061 (7) | 0.0091 (7) |
| N2 | 0.0680 (9) | 0.0699 (9) | 0.0601 (10) | −0.0009 (8) | 0.0042 (8) | −0.0023 (8) |
| N3 | 0.0561 (8) | 0.0491 (7) | 0.0682 (11) | 0.0080 (7) | −0.0015 (8) | 0.0022 (8) |
| N4 | 0.0669 (9) | 0.0537 (8) | 0.0709 (11) | 0.0047 (8) | 0.0043 (8) | 0.0025 (8) |
| O1 | 0.0878 (9) | 0.0774 (9) | 0.0887 (11) | −0.0004 (7) | −0.0012 (8) | 0.0027 (8) |
| O2 | 0.0867 (10) | 0.0885 (10) | 0.1433 (16) | 0.0021 (8) | 0.0031 (10) | −0.0361 (10) |
| C1—N1 | 1.335 (2) | C9—C10 | 1.369 (3) |
| C1—C2 | 1.352 (3) | C9—H9 | 0.9300 |
| C1—H1 | 0.9300 | C10—N4 | 1.331 (2) |
| C2—C3 | 1.367 (3) | C10—H10 | 0.9300 |
| C2—H2 | 0.9300 | C11—N3 | 1.459 (2) |
| C3—N2 | 1.322 (2) | C11—C12 | 1.517 (2) |
| C3—H3 | 0.9300 | C11—H11 | 0.9700 |
| C4—N1 | 1.460 (2) | C11—H12 | 0.9700 |
| C4—C5 | 1.510 (2) | C12—C13 | 1.373 (2) |
| C4—H4 | 0.9700 | C12—C14 | 1.375 (2) |
| C4—H5 | 0.9700 | C13—C14ii | 1.380 (2) |
| C5—C6 | 1.375 (3) | C13—H13 | 0.9300 |
| C5—C7 | 1.381 (2) | C14—C13ii | 1.380 (2) |
| C6—C7i | 1.374 (3) | C14—H14 | 0.9300 |
| C6—H6 | 0.9300 | N1—N2 | 1.345 (2) |
| C7—C6i | 1.374 (3) | N3—N4 | 1.348 (2) |
| C7—H7 | 0.9300 | O1—H15 | 0.8500 |
| C8—N3 | 1.339 (2) | O1—H16 | 0.8500 |
| C8—C9 | 1.361 (3) | O2—H17 | 0.8500 |
| C8—H8 | 0.9300 | O2—H18 | 0.8500 |
| N1—C1—C2 | 107.56 (18) | C10—C9—H9 | 127.6 |
| N1—C1—H1 | 126.2 | N4—C10—C9 | 112.01 (18) |
| C2—C1—H1 | 126.2 | N4—C10—H10 | 124.0 |
| C1—C2—C3 | 104.84 (18) | C9—C10—H10 | 124.0 |
| C1—C2—H2 | 127.6 | N3—C11—C12 | 111.94 (14) |
| C3—C2—H2 | 127.6 | N3—C11—H11 | 109.2 |
| N2—C3—C2 | 112.08 (19) | C12—C11—H11 | 109.2 |
| N2—C3—H3 | 124.0 | N3—C11—H12 | 109.2 |
| C2—C3—H3 | 124.0 | C12—C11—H12 | 109.2 |
| N1—C4—C5 | 111.25 (14) | H11—C11—H12 | 107.9 |
| N1—C4—H4 | 109.4 | C13—C12—C14 | 118.04 (16) |
| C5—C4—H4 | 109.4 | C13—C12—C11 | 120.95 (17) |
| N1—C4—H5 | 109.4 | C14—C12—C11 | 121.00 (16) |
| C5—C4—H5 | 109.4 | C12—C13—C14ii | 121.16 (16) |
| H4—C4—H5 | 108.0 | C12—C13—H13 | 119.4 |
| C6—C5—C7 | 118.11 (16) | C14ii—C13—H13 | 119.4 |
| C6—C5—C4 | 120.89 (17) | C12—C14—C13ii | 120.80 (16) |
| C7—C5—C4 | 120.97 (18) | C12—C14—H14 | 119.6 |
| C7i—C6—C5 | 121.54 (17) | C13ii—C14—H14 | 119.6 |
| C7i—C6—H6 | 119.2 | C1—N1—N2 | 111.26 (16) |
| C5—C6—H6 | 119.2 | C1—N1—C4 | 128.31 (17) |
| C6i—C7—C5 | 120.36 (17) | N2—N1—C4 | 119.92 (15) |
| C6i—C7—H7 | 119.8 | C3—N2—N1 | 104.26 (16) |
| C5—C7—H7 | 119.8 | C8—N3—N4 | 111.25 (16) |
| N3—C8—C9 | 107.6 (2) | C8—N3—C11 | 128.06 (17) |
| N3—C8—H8 | 126.2 | N4—N3—C11 | 120.37 (16) |
| C9—C8—H8 | 126.2 | C10—N4—N3 | 104.34 (16) |
| C8—C9—C10 | 104.80 (19) | H15—O1—H16 | 105.7 |
| C8—C9—H9 | 127.6 | H17—O2—H18 | 108.3 |
| H··· | ||||
| O1—H15···N4 | 0.85 | 2.08 | 2.929 (3) | 178 |
| O1—H16···O2iii | 0.85 | 1.87 | 2.717 (2) | 177 |
| O2—H17···N2i | 0.85 | 2.08 | 2.923 (2) | 170 |
| O2—H18···O1 | 0.85 | 1.89 | 2.733 (2) | 172 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H15⋯N4 | 0.85 | 2.08 | 2.929 (3) | 178 |
| O1—H16⋯O2i | 0.85 | 1.87 | 2.717 (2) | 177 |
| O2—H17⋯N2ii | 0.85 | 2.08 | 2.923 (2) | 170 |
| O2—H18⋯O1 | 0.85 | 1.89 | 2.733 (2) | 172 |
Symmetry codes: (i) ; (ii) .