| Literature DB >> 21582343 |
V Bon1, A Dudko, S Orysyk, V Pekhnyo.
Abstract
In the title compound, [PdCl(2)(C(7)H(9)N)(2)], the Pd atom is situated on an inversion centre and displays a distorted square-planar coordination environment. The crystal structure displays weak inter-molecular N-H⋯Cl hydrogen bonding.Entities:
Year: 2009 PMID: 21582343 PMCID: PMC2968883 DOI: 10.1107/S1600536809008472
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [PdCl2(C7H9N)2] | |
| Monoclinic, | Melting point: 560 K |
| Hall symbol: -P 2ybc | Mo |
| Cell parameters from 1337 reflections | |
| θ = 3.0–22.5° | |
| µ = 1.61 mm−1 | |
| β = 97.346 (2)° | |
| Plate, yellow | |
| 0.17 × 0.16 × 0.04 mm |
| Bruker APEXII CCD diffractometer | 1502 independent reflections |
| Radiation source: Fine–focus sealed tube | 1118 reflections with |
| Graphite | |
| Detector resolution: 8.26 pixels mm-1 | θmax = 26.4°, θmin = 1.7° |
| φ and ω scans | |
| Absorption correction: multi-scan ( | |
| 8179 measured reflections |
| Refinement on | Primary atom site location: Direct |
| Least-squares matrix: Full | Secondary atom site location: Difmap |
| Hydrogen site location: Geom | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1502 reflections | (Δ/σ)max < 0.001 |
| 97 parameters | Δρmax = 0.48 e Å−3 |
| 2 restraints | Δρmin = −0.66 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| Pd1 | 0.0000 | 0.5000 | 0.0000 | 0.01692 (12) | |
| Cl1 | 0.06040 (8) | 0.77044 (11) | 0.02411 (13) | 0.0222 (2) | |
| N1 | 0.1118 (3) | 0.4372 (4) | 0.2186 (5) | 0.0192 (8) | |
| H1N | 0.130 (3) | 0.526 (4) | 0.276 (5) | 0.024 (12)* | |
| H2N | 0.071 (3) | 0.386 (4) | 0.294 (5) | 0.025 (12)* | |
| C1 | 0.2062 (3) | 0.3358 (5) | 0.1906 (5) | 0.0216 (9) | |
| C2 | 0.3051 (4) | 0.4060 (6) | 0.1573 (6) | 0.0300 (11) | |
| C3 | 0.3912 (3) | 0.2990 (6) | 0.1258 (6) | 0.0330 (11) | |
| H3 | 0.4596 | 0.3446 | 0.1015 | 0.040* | |
| C4 | 0.3790 (4) | 0.1308 (6) | 0.1291 (6) | 0.0390 (12) | |
| H4 | 0.4387 | 0.0612 | 0.1073 | 0.047* | |
| C5 | 0.2808 (4) | 0.0614 (6) | 0.1639 (6) | 0.0352 (12) | |
| H5 | 0.2722 | −0.0556 | 0.1653 | 0.042* | |
| C6 | 0.1949 (3) | 0.1643 (5) | 0.1967 (5) | 0.0271 (10) | |
| H6 | 0.1275 | 0.1174 | 0.2238 | 0.032* | |
| C7 | 0.3210 (4) | 0.5894 (6) | 0.1537 (7) | 0.0432 (14) | |
| H7A | 0.2701 | 0.6373 | 0.0560 | 0.065* | |
| H7B | 0.3974 | 0.6142 | 0.1350 | 0.065* | |
| H7C | 0.3060 | 0.6370 | 0.2677 | 0.065* |
| Pd1 | 0.0189 (2) | 0.0155 (2) | 0.0169 (2) | 0.0004 (2) | 0.00446 (15) | −0.0002 (2) |
| Cl1 | 0.0272 (5) | 0.0174 (5) | 0.0222 (5) | −0.0014 (4) | 0.0033 (4) | 0.0008 (4) |
| N1 | 0.0228 (18) | 0.0170 (17) | 0.019 (2) | −0.0008 (14) | 0.0066 (16) | −0.0040 (16) |
| C1 | 0.022 (2) | 0.025 (2) | 0.017 (2) | 0.0002 (17) | 0.0021 (18) | 0.0009 (17) |
| C2 | 0.029 (3) | 0.039 (3) | 0.022 (3) | 0.000 (2) | 0.004 (2) | 0.000 (2) |
| C3 | 0.022 (2) | 0.044 (3) | 0.033 (3) | 0.007 (2) | 0.004 (2) | −0.004 (2) |
| C4 | 0.034 (3) | 0.047 (3) | 0.036 (3) | 0.014 (2) | 0.003 (2) | −0.012 (2) |
| C5 | 0.041 (3) | 0.030 (2) | 0.033 (3) | 0.006 (2) | 0.000 (2) | −0.005 (2) |
| C6 | 0.025 (2) | 0.034 (3) | 0.022 (3) | 0.0000 (19) | 0.0007 (19) | 0.0015 (19) |
| C7 | 0.031 (3) | 0.035 (3) | 0.063 (4) | 0.001 (2) | 0.002 (3) | 0.005 (3) |
| Pd1—N1 | 2.063 (3) | C3—C4 | 1.365 (6) |
| Pd1—N1i | 2.063 (3) | C3—H3 | 0.9500 |
| Pd1—Cl1i | 2.3017 (9) | C4—C5 | 1.376 (6) |
| Pd1—Cl1 | 2.3017 (9) | C4—H4 | 0.9500 |
| N1—C1 | 1.449 (5) | C5—C6 | 1.382 (5) |
| N1—H1N | 0.85 (2) | C5—H5 | 0.9500 |
| N1—H2N | 0.90 (2) | C6—H6 | 0.9500 |
| C1—C2 | 1.383 (5) | C7—H7A | 0.9800 |
| C1—C6 | 1.392 (5) | C7—H7B | 0.9800 |
| C2—C3 | 1.402 (6) | C7—H7C | 0.9800 |
| C2—C7 | 1.492 (5) | ||
| N1—Pd1—N1i | 180.0 | C4—C3—C2 | 121.5 (4) |
| N1—Pd1—Cl1i | 90.13 (10) | C4—C3—H3 | 119.2 |
| N1i—Pd1—Cl1i | 89.87 (10) | C2—C3—H3 | 119.2 |
| N1—Pd1—Cl1 | 89.88 (10) | C3—C4—C5 | 120.5 (4) |
| N1i—Pd1—Cl1 | 90.13 (10) | C3—C4—H4 | 119.8 |
| Cl1i—Pd1—Cl1 | 180.0 | C5—C4—H4 | 119.8 |
| C1—N1—Pd1 | 118.6 (3) | C4—C5—C6 | 119.1 (4) |
| C1—N1—H1N | 113 (3) | C4—C5—H5 | 120.4 |
| Pd1—N1—H1N | 108 (3) | C6—C5—H5 | 120.4 |
| C1—N1—H2N | 110 (2) | C5—C6—C1 | 120.7 (4) |
| Pd1—N1—H2N | 105 (3) | C5—C6—H6 | 119.7 |
| H1N—N1—H2N | 101 (4) | C1—C6—H6 | 119.7 |
| C2—C1—C6 | 120.3 (4) | C2—C7—H7A | 109.5 |
| C2—C1—N1 | 121.5 (4) | C2—C7—H7B | 109.5 |
| C6—C1—N1 | 118.2 (4) | H7A—C7—H7B | 109.5 |
| C1—C2—C3 | 117.8 (4) | C2—C7—H7C | 109.5 |
| C1—C2—C7 | 121.8 (4) | H7A—C7—H7C | 109.5 |
| C3—C2—C7 | 120.4 (4) | H7B—C7—H7C | 109.5 |
| Cl1i—Pd1—N1—C1 | 70.4 (3) | C1—C2—C3—C4 | −0.5 (7) |
| Cl1—Pd1—N1—C1 | −109.6 (3) | C7—C2—C3—C4 | 179.7 (5) |
| Pd1—N1—C1—C2 | 90.5 (4) | C2—C3—C4—C5 | 0.0 (7) |
| Pd1—N1—C1—C6 | −89.0 (4) | C3—C4—C5—C6 | −0.5 (7) |
| C6—C1—C2—C3 | 1.6 (6) | C4—C5—C6—C1 | 1.5 (7) |
| N1—C1—C2—C3 | −177.9 (4) | C2—C1—C6—C5 | −2.1 (7) |
| C6—C1—C2—C7 | −178.7 (4) | N1—C1—C6—C5 | 177.4 (4) |
| N1—C1—C2—C7 | 1.9 (7) |
| H··· | ||||
| N1—H1N···Cl1ii | 0.85 (2) | 2.71 (3) | 3.410 (4) | 141 (3) |
| N1—H2N···Cl1iii | 0.90 (2) | 2.43 (3) | 3.319 (4) | 172 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.85 (2) | 2.71 (3) | 3.410 (4) | 141 (3) |
| N1—H2 | 0.90 (2) | 2.43 (3) | 3.319 (4) | 172 (3) |
Symmetry codes: (i) ; (ii) .