| Literature DB >> 21582276 |
Hoong-Kun Fun, Suchada Chantrapromma.
Abstract
Hexane-dioic acid (or adipic acid), C(6)H(10)O(4), crystallizes with two crystallographically independent half-mol-ecules in the asymmetric unit of the triclinic unit cell, space group P, as each mol-ecule lies across a crystallographic inversion centre. A monoclinic polymorph has been reported previously, most recently by Ranganathan, Kulkarni & Rao [J. Phys. Chem. A, (2003), 107, 6073-6081]. The mol-ecules adopt the expected zigzag structure and are linked via centrosymmetric pairs of O-H⋯O hydrogen bonds, forming infinite one-dimensional chains along [011]. These chains are stacked along the a axis. The crystal is further stabilized by weak C-H⋯O inter-actions.Entities:
Year: 2009 PMID: 21582276 PMCID: PMC2968612 DOI: 10.1107/S1600536809006448
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C6H10O4 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 1553 reflections | |
| θ = 2.8–27.5° | |
| µ = 0.12 mm−1 | |
| α = 93.794 (4)° | |
| β = 104.321 (4)° | Needle, colorless |
| γ = 102.689 (4)° | 0.55 × 0.11 × 0.06 mm |
| Bruker APEXII CCD area-detector diffractometer | 1553 independent reflections |
| Radiation source: sealed tube | 1419 reflections with |
| graphite | |
| φ and ω scans | θmax = 27.5°, θmin = 2.8° |
| Absorption correction: multi-scan ( | |
| 7773 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1553 reflections | (Δ/σ)max = 0.001 |
| 91 parameters | Δρmax = 0.32 e Å−3 |
| 0 restraints | Δρmin = −0.20 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1A | 0.07345 (14) | 0.10624 (13) | 0.21778 (12) | 0.0182 (2) | |
| O2A | −0.11534 (14) | 0.20271 (13) | −0.02751 (12) | 0.0198 (2) | |
| H2OA | −0.0961 | 0.1042 | −0.0779 | 0.030* | |
| C1A | −0.02548 (19) | 0.22010 (17) | 0.14771 (16) | 0.0156 (3) | |
| C2A | −0.0623 (2) | 0.39330 (18) | 0.24950 (16) | 0.0174 (3) | |
| H2AA | −0.2127 | 0.3787 | 0.2269 | 0.021* | |
| H2AB | −0.0057 | 0.5124 | 0.2026 | 0.021* | |
| C3A | 0.03484 (19) | 0.41932 (17) | 0.45233 (16) | 0.0167 (3) | |
| H3AA | 0.1794 | 0.4448 | 0.4777 | 0.020* | |
| H3AB | −0.0108 | 0.3012 | 0.4996 | 0.020* | |
| O1B | 0.45905 (14) | 0.56597 (12) | 0.19844 (12) | 0.0189 (2) | |
| O2B | 0.61849 (14) | 0.75868 (13) | 0.02759 (12) | 0.0204 (2) | |
| H2OB | 0.5906 | 0.6539 | −0.0380 | 0.031* | |
| C1B | 0.54652 (19) | 0.72852 (18) | 0.17064 (16) | 0.0159 (3) | |
| C2B | 0.5885 (2) | 0.91565 (18) | 0.29479 (16) | 0.0173 (3) | |
| H2BA | 0.5457 | 1.0160 | 0.2236 | 0.021* | |
| H2BB | 0.7389 | 0.9603 | 0.3491 | 0.021* | |
| C3B | 0.47841 (19) | 0.89970 (17) | 0.44459 (16) | 0.0161 (3) | |
| H3BA | 0.5266 | 0.8106 | 0.5238 | 0.019* | |
| H3BB | 0.3356 | 0.8519 | 0.3947 | 0.019* |
| O1A | 0.0225 (5) | 0.0180 (4) | 0.0144 (4) | 0.0084 (4) | 0.0033 (3) | −0.0012 (3) |
| O2A | 0.0287 (5) | 0.0185 (4) | 0.0129 (4) | 0.0113 (4) | 0.0033 (4) | −0.0023 (3) |
| C1A | 0.0165 (6) | 0.0157 (6) | 0.0135 (6) | 0.0019 (4) | 0.0049 (4) | −0.0014 (4) |
| C2A | 0.0218 (6) | 0.0156 (6) | 0.0151 (6) | 0.0066 (5) | 0.0044 (5) | −0.0013 (5) |
| C3A | 0.0192 (6) | 0.0155 (6) | 0.0149 (6) | 0.0050 (5) | 0.0039 (5) | −0.0021 (5) |
| O1B | 0.0248 (5) | 0.0160 (4) | 0.0166 (4) | 0.0050 (4) | 0.0078 (4) | −0.0008 (3) |
| O2B | 0.0278 (5) | 0.0164 (4) | 0.0173 (5) | 0.0022 (4) | 0.0111 (4) | −0.0034 (3) |
| C1B | 0.0157 (6) | 0.0177 (6) | 0.0140 (6) | 0.0056 (5) | 0.0028 (4) | −0.0009 (5) |
| C2B | 0.0204 (6) | 0.0149 (6) | 0.0156 (6) | 0.0029 (5) | 0.0055 (5) | −0.0028 (5) |
| C3B | 0.0185 (6) | 0.0150 (6) | 0.0138 (6) | 0.0034 (5) | 0.0039 (5) | −0.0019 (5) |
| O1A—C1A | 1.2199 (15) | O1B—C1B | 1.2207 (15) |
| O2A—C1A | 1.3237 (14) | O2B—C1B | 1.3238 (15) |
| O2A—H2OA | 0.8200 | O2B—H2OB | 0.8200 |
| C1A—C2A | 1.5007 (16) | C1B—C2B | 1.5001 (16) |
| C2A—C3A | 1.5220 (16) | C2B—C3B | 1.5201 (17) |
| C2A—H2AA | 0.9700 | C2B—H2BA | 0.9700 |
| C2A—H2AB | 0.9700 | C2B—H2BB | 0.9700 |
| C3A—C3Ai | 1.528 (2) | C3B—C3Bii | 1.525 (2) |
| C3A—H3AA | 0.9222 | C3B—H3BA | 0.9537 |
| C3A—H3AB | 0.9462 | C3B—H3BB | 0.9224 |
| C1A—O2A—H2OA | 109.5 | C1B—O2B—H2OB | 109.5 |
| O1A—C1A—O2A | 123.52 (11) | O1B—C1B—O2B | 123.41 (11) |
| O1A—C1A—C2A | 124.18 (11) | O1B—C1B—C2B | 124.33 (11) |
| O2A—C1A—C2A | 112.29 (10) | O2B—C1B—C2B | 112.25 (10) |
| C1A—C2A—C3A | 114.73 (10) | C1B—C2B—C3B | 115.27 (10) |
| C1A—C2A—H2AA | 108.6 | C1B—C2B—H2BA | 108.5 |
| C3A—C2A—H2AA | 108.6 | C3B—C2B—H2BA | 108.5 |
| C1A—C2A—H2AB | 108.6 | C1B—C2B—H2BB | 108.5 |
| C3A—C2A—H2AB | 108.6 | C3B—C2B—H2BB | 108.5 |
| H2AA—C2A—H2AB | 107.6 | H2BA—C2B—H2BB | 107.5 |
| C2A—C3A—C3Ai | 111.19 (13) | C2B—C3B—C3Bii | 110.83 (12) |
| C2A—C3A—H3AA | 110.2 | C2B—C3B—H3BA | 110.6 |
| C3Ai—C3A—H3AA | 111.6 | C3Bii—C3B—H3BA | 108.1 |
| C2A—C3A—H3AB | 109.9 | C2B—C3B—H3BB | 109.3 |
| C3Ai—C3A—H3AB | 106.7 | C3Bii—C3B—H3BB | 109.7 |
| H3AA—C3A—H3AB | 107.0 | H3BA—C3B—H3BB | 108.3 |
| O1A—C1A—C2A—C3A | 0.07 (17) | O1B—C1B—C2B—C3B | −11.15 (18) |
| O2A—C1A—C2A—C3A | 179.19 (10) | O2B—C1B—C2B—C3B | 169.89 (10) |
| C1A—C2A—C3A—C3Ai | −172.28 (12) | C1B—C2B—C3B—C3Bii | −176.67 (13) |
| H··· | ||||
| O2A—H2OA···O1Aiii | 0.82 | 1.82 | 2.6397 (13) | 172 |
| O2B—H2OB···O1Biv | 0.82 | 1.82 | 2.6421 (13) | 174 |
| C2A—H2AB···O2Av | 0.97 | 2.58 | 3.5415 (16) | 171 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O2 | 0.82 | 1.82 | 2.6397 (13) | 172 |
| O2 | 0.82 | 1.82 | 2.6421 (13) | 174 |
| C2 | 0.97 | 2.58 | 3.5415 (16) | 171 |
Symmetry codes: (i) ; (ii) ; (iii) .