Literature DB >> 21582129

4-[2-(4-Fluoro-phen-yl)-1H-pyrrol-3-yl]pyridine.

Bassam Abu Thaher, Pierre Koch, Dieter Schollmeyer, Stefan Laufer.   

Abstract

In the crystal structure of the title compound, C(15)H(11)FN(2), the pyrrole ring makes dihedral angles of 33.19 (9) and 36.33 (10)° with the pyridine and 4-fluoro-phenyl rings, respectively. The pyridine ring makes a dihedral angle of 46.59 (9)° with the 4-fluoro-phenyl ring. In the crystal structure, an N-H⋯N hydrogen bond joins the mol-ecules into chains.

Entities:  

Year:  2009        PMID: 21582129      PMCID: PMC2968667          DOI: 10.1107/S160053680900364X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

Many 1-(4-fluoro­phenyl)-2-(pyridin-4-yl)pyrrol derivatives have been prepared and their biological activities studied; see: de Laszlo et al. (1998 ▶); Revesz et al. (2000 ▶, 2002 ▶); Qian et al. (2006 ▶). For the synthesis of the title compound, see: Qian et al. (2006 ▶).

Experimental

Crystal data

C15H11FN2 M = 238.26 Orthorhombic, a = 9.2966 (7) Å b = 8.1966 (5) Å c = 30.5738 (19) Å V = 2329.7 (3) Å3 Z = 8 Cu Kα radiation μ = 0.76 mm−1 T = 193 (2) K 0.25 × 0.20 × 0.18 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: none 2175 measured reflections 2175 independent reflections 1744 reflections with I > 2σ(I) 3 standard reflections frequency: 60 min intensity decay: 2%

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.120 S = 1.03 2175 reflections 164 parameters H-atom parameters constrained Δρmax = 0.26 e Å−3 Δρmin = −0.17 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: CORINC (Dräger & Gattow, 1971 ▶); program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2003 ▶); software used to prepare material for publication: PLATON. Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053680900364X/bt2858sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680900364X/bt2858Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H11FN2F(000) = 992
Mr = 238.26Dx = 1.359 Mg m3
Orthorhombic, PbcaCu Kα radiation, λ = 1.54178 Å
Hall symbol: -P 2ac 2abCell parameters from 25 reflections
a = 9.2966 (7) Åθ = 30–51.7°
b = 8.1966 (5) ŵ = 0.76 mm1
c = 30.5738 (19) ÅT = 193 K
V = 2329.7 (3) Å3Plate, light brown
Z = 80.25 × 0.20 × 0.18 mm
Enraf–Nonius CAD-4 diffractometerRint = 0.0000
Radiation source: rotating anodeθmax = 69.5°, θmin = 2.9°
graphiteh = 0→11
ω/2θ scansk = −9→0
2175 measured reflectionsl = −36→0
2175 independent reflections3 standard reflections every 60 min
1744 reflections with I > 2σ(I) intensity decay: 2%
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.042H-atom parameters constrained
wR(F2) = 0.120w = 1/[σ2(Fo2) + (0.0641P)2 + 0.5148P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max < 0.001
2175 reflectionsΔρmax = 0.26 e Å3
164 parametersΔρmin = −0.17 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.00086 (16)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.51524 (14)0.21406 (17)0.41905 (5)0.0278 (3)
H10.60830.22660.40810.033*
C20.39066 (16)0.2347 (2)0.39570 (6)0.0249 (4)
C30.27690 (16)0.2008 (2)0.42407 (5)0.0255 (4)
C40.33869 (18)0.1586 (2)0.46491 (6)0.0311 (4)
H40.28760.12880.49060.037*
C50.48474 (18)0.1684 (2)0.46075 (6)0.0317 (4)
H50.55310.14700.48310.038*
C60.39610 (16)0.2800 (2)0.34938 (5)0.0264 (4)
C70.50091 (18)0.3890 (2)0.33407 (6)0.0331 (4)
H70.56980.43220.35390.040*
C80.5055 (2)0.4345 (3)0.29053 (6)0.0421 (5)
H80.57730.50750.28020.051*
C90.4047 (2)0.3721 (3)0.26266 (6)0.0429 (5)
C100.3009 (2)0.2630 (3)0.27593 (6)0.0395 (5)
H100.23290.22070.25570.047*
C110.29785 (18)0.2163 (2)0.31936 (6)0.0311 (4)
H110.22790.13970.32890.037*
F120.40632 (16)0.4201 (2)0.22006 (4)0.0706 (5)
C130.12145 (16)0.20955 (19)0.41599 (5)0.0244 (4)
C140.05747 (18)0.3235 (2)0.38834 (6)0.0292 (4)
H140.11550.39910.37270.035*
C15−0.09026 (18)0.3267 (2)0.38362 (6)0.0318 (4)
H15−0.13070.40530.36440.038*
N16−0.17994 (14)0.2253 (2)0.40458 (5)0.0329 (4)
C17−0.11823 (18)0.1169 (2)0.43157 (6)0.0320 (4)
H17−0.17910.04420.44720.038*
C180.02834 (17)0.1046 (2)0.43807 (5)0.0286 (4)
H180.06570.02480.45750.034*
U11U22U33U12U13U23
N10.0166 (6)0.0319 (8)0.0348 (8)−0.0002 (6)−0.0004 (5)0.0008 (6)
C20.0176 (7)0.0249 (8)0.0322 (9)0.0008 (6)0.0008 (6)−0.0021 (6)
C30.0207 (8)0.0253 (8)0.0304 (8)−0.0006 (6)0.0015 (6)−0.0009 (7)
C40.0258 (8)0.0379 (10)0.0297 (9)0.0005 (7)0.0018 (7)0.0050 (7)
C50.0266 (8)0.0359 (10)0.0327 (9)0.0011 (7)−0.0036 (7)0.0037 (7)
C60.0199 (7)0.0276 (8)0.0316 (9)0.0044 (6)0.0034 (6)−0.0020 (6)
C70.0267 (8)0.0374 (10)0.0353 (9)−0.0029 (7)0.0064 (7)−0.0013 (7)
C80.0413 (10)0.0452 (11)0.0399 (10)−0.0017 (9)0.0160 (9)0.0048 (8)
C90.0483 (11)0.0538 (12)0.0266 (9)0.0098 (10)0.0091 (8)0.0025 (8)
C100.0377 (10)0.0475 (11)0.0332 (10)0.0072 (9)−0.0022 (8)−0.0071 (8)
C110.0253 (8)0.0342 (9)0.0339 (9)0.0030 (7)0.0007 (7)−0.0027 (7)
F120.0869 (11)0.0956 (11)0.0292 (6)−0.0015 (9)0.0080 (6)0.0113 (7)
C130.0204 (8)0.0262 (8)0.0264 (8)−0.0003 (6)0.0028 (6)−0.0052 (6)
C140.0226 (8)0.0289 (9)0.0361 (9)0.0001 (7)0.0041 (7)0.0013 (7)
C150.0232 (8)0.0343 (9)0.0380 (10)0.0042 (7)0.0013 (7)0.0012 (8)
N160.0197 (7)0.0426 (9)0.0362 (8)0.0000 (6)0.0031 (6)−0.0027 (7)
C170.0237 (8)0.0384 (10)0.0339 (9)−0.0049 (7)0.0065 (7)0.0000 (7)
C180.0244 (8)0.0326 (9)0.0286 (8)−0.0009 (7)0.0025 (6)0.0005 (7)
N1—C51.358 (2)C9—F121.360 (2)
N1—C21.371 (2)C9—C101.377 (3)
N1—H10.9339C10—C111.382 (3)
C2—C31.396 (2)C10—H100.9500
C2—C61.465 (2)C11—H110.9500
C3—C41.417 (2)C13—C141.393 (2)
C3—C131.468 (2)C13—C181.395 (2)
C4—C51.366 (2)C14—C151.381 (2)
C4—H40.9500C14—H140.9500
C5—H50.9500C15—N161.340 (2)
C6—C111.396 (2)C15—H150.9500
C6—C71.402 (2)N16—C171.341 (2)
C7—C81.383 (3)C17—C181.381 (2)
C7—H70.9500C17—H170.9500
C8—C91.366 (3)C18—H180.9500
C8—H80.9500
C5—N1—C2110.27 (14)F12—C9—C10118.54 (19)
C5—N1—H1124.1C8—C9—C10122.70 (18)
C2—N1—H1125.6C9—C10—C11118.50 (18)
N1—C2—C3106.96 (15)C9—C10—H10120.8
N1—C2—C6120.37 (14)C11—C10—H10120.8
C3—C2—C6132.65 (15)C10—C11—C6120.97 (17)
C2—C3—C4106.80 (14)C10—C11—H11119.5
C2—C3—C13129.17 (15)C6—C11—H11119.5
C4—C3—C13124.00 (15)C14—C13—C18116.25 (15)
C5—C4—C3107.84 (15)C14—C13—C3123.73 (15)
C5—C4—H4126.1C18—C13—C3119.96 (15)
C3—C4—H4126.1C15—C14—C13120.04 (16)
N1—C5—C4108.13 (15)C15—C14—H14120.0
N1—C5—H5125.9C13—C14—H14120.0
C4—C5—H5125.9N16—C15—C14123.85 (17)
C11—C6—C7118.26 (16)N16—C15—H15118.1
C11—C6—C2121.19 (15)C14—C15—H15118.1
C7—C6—C2120.55 (15)C15—N16—C17116.02 (14)
C8—C7—C6120.96 (18)N16—C17—C18123.98 (16)
C8—C7—H7119.5N16—C17—H17118.0
C6—C7—H7119.5C18—C17—H17118.0
C9—C8—C7118.57 (18)C17—C18—C13119.86 (16)
C9—C8—H8120.7C17—C18—H18120.1
C7—C8—H8120.7C13—C18—H18120.1
F12—C9—C8118.76 (19)
C5—N1—C2—C30.13 (19)C7—C8—C9—C10−1.6 (3)
C5—N1—C2—C6−178.44 (15)F12—C9—C10—C11−178.99 (17)
N1—C2—C3—C4−0.29 (18)C8—C9—C10—C110.8 (3)
C6—C2—C3—C4178.03 (17)C9—C10—C11—C61.0 (3)
N1—C2—C3—C13177.86 (16)C7—C6—C11—C10−1.9 (2)
C6—C2—C3—C13−3.8 (3)C2—C6—C11—C10178.16 (16)
C2—C3—C4—C50.4 (2)C2—C3—C13—C14−33.5 (3)
C13—C3—C4—C5−177.92 (16)C4—C3—C13—C14144.40 (18)
C2—N1—C5—C40.1 (2)C2—C3—C13—C18149.46 (17)
C3—C4—C5—N1−0.3 (2)C4—C3—C13—C18−32.7 (2)
N1—C2—C6—C11142.67 (16)C18—C13—C14—C15−0.8 (2)
C3—C2—C6—C11−35.5 (3)C3—C13—C14—C15−177.95 (16)
N1—C2—C6—C7−37.2 (2)C13—C14—C15—N160.4 (3)
C3—C2—C6—C7144.63 (19)C14—C15—N16—C170.3 (3)
C11—C6—C7—C81.1 (3)C15—N16—C17—C18−0.7 (3)
C2—C6—C7—C8−178.99 (17)N16—C17—C18—C130.3 (3)
C6—C7—C8—C90.6 (3)C14—C13—C18—C170.4 (2)
C7—C8—C9—F12178.17 (18)C3—C13—C18—C17177.73 (16)
D—H···AD—HH···AD···AD—H···A
N1—H1···N16i0.931.972.8696 (19)161
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯N16i0.931.972.8696 (19)161

Symmetry code: (i) .

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2.  SAR of 4-hydroxypiperidine and hydroxyalkyl substituted heterocycles as novel p38 map kinase inhibitors.

Authors:  L Revesz; F E Di Padova; T Buhl; R Feifel; H Gram; P Hiestand; U Manning; A G Zimmerlin
Journal:  Bioorg Med Chem Lett       Date:  2000-06-05       Impact factor: 2.823

3.  SAR of 2,6-diamino-3,5-difluoropyridinyl substituted heterocycles as novel p38MAP kinase inhibitors.

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Journal:  Bioorg Med Chem Lett       Date:  2002-08-19       Impact factor: 2.823

4.  Pyrroles and other heterocycles as inhibitors of p38 kinase.

Authors:  S E de Laszlo; D Visco; L Agarwal; L Chang; J Chin; G Croft; A Forsyth; D Fletcher; B Frantz; C Hacker; W Hanlon; C Harper; M Kostura; B Li; S Luell; M MacCoss; N Mantlo; E A O'Neill; C Orevillo; M Pang; J Parsons; A Rolando; Y Sahly; K Sidler; S J O'Keefe
Journal:  Bioorg Med Chem Lett       Date:  1998-10-06       Impact factor: 2.823

5.  Synthesis and SAR studies of diarylpyrrole anticoccidial agents.

Authors:  Xiaoxia Qian; Gui-Bai Liang; Dennis Feng; Michael Fisher; Tami Crumley; Sandra Rattray; Paula M Dulski; Anne Gurnett; Penny Sue Leavitt; Paul A Liberator; Andrew S Misura; Samantha Samaras; Tamas Tamas; Dennis M Schmatz; Matthew Wyvratt; Tesfaye Biftu
Journal:  Bioorg Med Chem Lett       Date:  2006-03-06       Impact factor: 2.823

  5 in total

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