| Literature DB >> 21581909 |
K Prabakaran, T Maiyalagan, Venkatesha R Hathwar, Canan Kazak, F Nawaz Khan.
Abstract
The title compound, C(4)H(5)N(3)O(2), features an essentially planar mol-ecule (r.m.s. deviation for all non-H atoms = 0.013 Å). The crystal structure is stabilized by inter-molecular N-H⋯O hydrogen bonds and π-π stacking inter-actions (centroid-centroid distance 3.882 Å).Entities:
Year: 2009 PMID: 21581909 PMCID: PMC2968371 DOI: 10.1107/S1600536809000877
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C4H5N3O2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 1804 reflections |
| θ = 2.4–25.5° | |
| µ = 0.12 mm−1 | |
| β = 100.938 (3)° | Block, pale yellow |
| 0.30 × 0.23 × 0.20 mm | |
| Bruker SMART CCD area-detector diffractometer | 1098 independent reflections |
| Radiation source: fine-focus sealed tube | 917 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.5°, θmin = 2.3° |
| Absorption correction: multi-scan ( | |
| 4285 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1098 reflections | (Δ/σ)max < 0.001 |
| 91 parameters | Δρmax = 0.20 e Å−3 |
| 0 restraints | Δρmin = −0.12 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| H3N | 0.668 (5) | 0.1865 (11) | 0.529 (2) | 0.069 (6)* | |
| H1 | 0.630 (5) | 0.3213 (10) | 0.510 (2) | 0.067 (5)* | |
| O1 | 0.2633 (4) | 0.39888 (6) | 0.89548 (14) | 0.0672 (4) | |
| O2 | 0.4220 (4) | 0.44536 (7) | 0.68279 (14) | 0.0670 (4) | |
| C3 | 0.3702 (4) | 0.38941 (9) | 0.77686 (18) | 0.0502 (4) | |
| N3 | 0.5970 (4) | 0.21920 (8) | 0.59504 (15) | 0.0520 (4) | |
| C2 | 0.4540 (4) | 0.31459 (8) | 0.71907 (16) | 0.0440 (4) | |
| N2 | 0.5029 (4) | 0.19156 (8) | 0.72315 (16) | 0.0577 (4) | |
| C1 | 0.5704 (4) | 0.29447 (9) | 0.58856 (18) | 0.0495 (4) | |
| N1 | 0.4149 (4) | 0.25012 (7) | 0.79947 (15) | 0.0541 (4) | |
| C4 | 0.3391 (8) | 0.52244 (11) | 0.7273 (3) | 0.0937 (8) | |
| H4A | 0.0894 | 0.5296 | 0.7056 | 0.141* | |
| H4B | 0.4472 | 0.5590 | 0.6700 | 0.141* | |
| H4C | 0.4261 | 0.5295 | 0.8358 | 0.141* |
| O1 | 0.0984 (10) | 0.0524 (7) | 0.0599 (8) | −0.0045 (6) | 0.0379 (7) | −0.0077 (5) |
| O2 | 0.0959 (10) | 0.0450 (7) | 0.0671 (8) | 0.0012 (6) | 0.0330 (7) | 0.0062 (5) |
| C3 | 0.0556 (9) | 0.0481 (9) | 0.0482 (9) | −0.0045 (7) | 0.0137 (7) | −0.0012 (7) |
| N3 | 0.0643 (9) | 0.0499 (8) | 0.0443 (8) | 0.0026 (6) | 0.0167 (6) | −0.0038 (6) |
| C2 | 0.0478 (8) | 0.0464 (8) | 0.0384 (8) | −0.0034 (6) | 0.0095 (6) | 0.0015 (6) |
| N2 | 0.0754 (10) | 0.0480 (8) | 0.0532 (8) | 0.0009 (6) | 0.0213 (7) | 0.0017 (6) |
| C1 | 0.0597 (10) | 0.0499 (9) | 0.0410 (9) | −0.0013 (7) | 0.0152 (7) | 0.0031 (7) |
| N1 | 0.0702 (9) | 0.0480 (8) | 0.0478 (8) | −0.0016 (6) | 0.0207 (7) | 0.0011 (5) |
| C4 | 0.134 (2) | 0.0464 (11) | 0.1117 (18) | 0.0019 (11) | 0.0499 (16) | 0.0029 (11) |
| O1—C3 | 1.2075 (19) | C2—N1 | 1.3561 (19) |
| O2—C3 | 1.3231 (19) | C2—C1 | 1.360 (2) |
| O2—C4 | 1.458 (2) | N2—N1 | 1.3065 (19) |
| C3—C2 | 1.464 (2) | C1—H1 | 0.906 (19) |
| N3—C1 | 1.322 (2) | C4—H4A | 0.9600 |
| N3—N2 | 1.3416 (19) | C4—H4B | 0.9600 |
| N3—H3N | 0.90 (2) | C4—H4C | 0.9600 |
| C3—O2—C4 | 116.63 (15) | N3—C1—C2 | 104.91 (14) |
| O1—C3—O2 | 124.02 (15) | N3—C1—H1 | 121.4 (12) |
| O1—C3—C2 | 124.05 (14) | C2—C1—H1 | 133.7 (12) |
| O2—C3—C2 | 111.92 (13) | N2—N1—C2 | 108.49 (13) |
| C1—N3—N2 | 111.36 (14) | O2—C4—H4A | 109.5 |
| C1—N3—H3N | 129.6 (12) | O2—C4—H4B | 109.5 |
| N2—N3—H3N | 119.0 (12) | H4A—C4—H4B | 109.5 |
| N1—C2—C1 | 108.37 (14) | O2—C4—H4C | 109.5 |
| N1—C2—C3 | 120.51 (13) | H4A—C4—H4C | 109.5 |
| C1—C2—C3 | 131.12 (14) | H4B—C4—H4C | 109.5 |
| N1—N2—N3 | 106.88 (13) | ||
| C4—O2—C3—O1 | −0.7 (3) | N2—N3—C1—C2 | 0.00 (17) |
| C4—O2—C3—C2 | 178.67 (17) | N1—C2—C1—N3 | −0.01 (17) |
| O1—C3—C2—N1 | −0.2 (2) | C3—C2—C1—N3 | −179.24 (16) |
| O2—C3—C2—N1 | −179.54 (14) | N3—N2—N1—C2 | −0.03 (18) |
| O1—C3—C2—C1 | 178.95 (17) | C1—C2—N1—N2 | 0.03 (18) |
| O2—C3—C2—C1 | −0.4 (2) | C3—C2—N1—N2 | 179.35 (13) |
| C1—N3—N2—N1 | 0.02 (18) |
| H··· | ||||
| N3—H3N···O1i | 0.896 (19) | 1.980 (19) | 2.8659 (19) | 169.56 (18) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N3—H3 | 0.896 (19) | 1.980 (19) | 2.8659 (19) | 169.56 (18) |
Symmetry code: (i) .