| Literature DB >> 21581901 |
Shi-Ming Lv1, Lei Zheng, Hui Zhao, Ying Li, Shu-Fan Yin.
Abstract
The title compound, C(14)H(19)NO(6), was synthesized by the condensation reaction between hecilid (4-formyl-phenl-β-d-allopyran-oside) and methyl-amine in methanol. In the crystal structure, the pyran ring adopts a chair conformation and adjacent mol-ecules are linked by inter-molecular O-H⋯O and O-H⋯N hydrogen bonds, forming a three-dimensional network.Entities:
Year: 2009 PMID: 21581901 PMCID: PMC2968321 DOI: 10.1107/S1600536809000944
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C14H19NO6 | |
| Monoclinic, | Mo |
| Hall symbol: P 2yb | Cell parameters from 25 reflections |
| θ = 4.2–7.5° | |
| µ = 0.11 mm−1 | |
| β = 91.46 (3)° | Block, colourless |
| 0.48 × 0.46 × 0.44 mm | |
| Enraf–Nonius CAD-4 diffractometer | |
| Radiation source: fine-focus sealed tube | θmax = 25.5°, θmin = 1.4° |
| graphite | |
| ω/2θ scans | |
| 1479 measured reflections | |
| 1469 independent reflections | 3 standard reflections every 120 reflections |
| 1325 reflections with | intensity decay: 0.8% |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1469 reflections | (Δ/σ)max < 0.001 |
| 195 parameters | Δρmax = 0.16 e Å−3 |
| 1 restraint | Δρmin = −0.24 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.3071 (3) | −0.0753 (2) | 0.21216 (11) | 0.0379 (4) | |
| O2 | 0.4392 (3) | −0.3849 (2) | 0.12078 (13) | 0.0451 (5) | |
| H2O | 0.4074 | −0.4260 | 0.1717 | 0.068* | |
| O3 | 0.1787 (3) | 0.0239 (3) | −0.03679 (11) | 0.0441 (4) | |
| H3O | 0.2854 | 0.0646 | −0.0527 | 0.066* | |
| O4 | 0.3774 (3) | 0.2704 (2) | 0.06228 (14) | 0.0465 (5) | |
| H4O | 0.3892 | 0.3747 | 0.0704 | 0.070* | |
| O5 | 0.2525 (3) | 0.3895 (2) | 0.23888 (12) | 0.0403 (4) | |
| H5O | 0.1701 | 0.4234 | 0.2764 | 0.060* | |
| O6 | 0.3519 (2) | 0.0903 (3) | 0.34359 (10) | 0.0394 (4) | |
| N1 | 1.0551 (3) | −0.0235 (3) | 0.64875 (15) | 0.0434 (5) | |
| C1 | 0.3201 (4) | −0.0893 (3) | 0.11071 (17) | 0.0331 (5) | |
| H1 | 0.4538 | −0.0559 | 0.0915 | 0.040* | |
| C2 | 0.1662 (4) | 0.0309 (3) | 0.06374 (16) | 0.0364 (5) | |
| H2 | 0.0333 | −0.0081 | 0.0811 | 0.044* | |
| C3 | 0.1951 (4) | 0.2142 (3) | 0.09971 (16) | 0.0377 (5) | |
| H3 | 0.0864 | 0.2873 | 0.0754 | 0.045* | |
| C4 | 0.2018 (4) | 0.2204 (3) | 0.20805 (16) | 0.0336 (5) | |
| H4 | 0.0711 | 0.1891 | 0.2320 | 0.040* | |
| C5 | 0.3562 (4) | 0.0917 (3) | 0.24383 (15) | 0.0336 (5) | |
| H5 | 0.4888 | 0.1242 | 0.2227 | 0.040* | |
| C6 | 0.2829 (4) | −0.2759 (3) | 0.0851 (2) | 0.0419 (6) | |
| H6A | 0.1575 | −0.3126 | 0.1110 | 0.050* | |
| H6B | 0.2727 | −0.2870 | 0.0167 | 0.050* | |
| C7 | 0.5264 (3) | 0.0507 (4) | 0.39210 (15) | 0.0346 (5) | |
| C8 | 0.5361 (4) | 0.1100 (4) | 0.48498 (15) | 0.0373 (6) | |
| H8 | 0.4298 | 0.1704 | 0.5098 | 0.045* | |
| C9 | 0.7042 (4) | 0.0788 (4) | 0.54001 (15) | 0.0380 (6) | |
| H9 | 0.7102 | 0.1165 | 0.6026 | 0.046* | |
| C10 | 0.8654 (4) | −0.0086 (3) | 0.50277 (16) | 0.0372 (6) | |
| C11 | 0.8541 (4) | −0.0656 (4) | 0.40913 (17) | 0.0414 (6) | |
| H11 | 0.9618 | −0.1226 | 0.3834 | 0.050* | |
| C12 | 0.6830 (4) | −0.0379 (4) | 0.35401 (16) | 0.0408 (6) | |
| H12 | 0.6742 | −0.0788 | 0.2921 | 0.049* | |
| C13 | 1.0481 (4) | −0.0398 (4) | 0.55985 (18) | 0.0415 (6) | |
| H13 | 1.1629 | −0.0727 | 0.5292 | 0.050* | |
| C14 | 1.2474 (4) | −0.0454 (5) | 0.6982 (2) | 0.0536 (7) | |
| H14A | 1.3461 | −0.0776 | 0.6535 | 0.080* | |
| H14B | 1.2368 | −0.1341 | 0.7453 | 0.080* | |
| H14C | 1.2855 | 0.0611 | 0.7282 | 0.080* |
| O1 | 0.0468 (9) | 0.0314 (9) | 0.0350 (9) | −0.0009 (8) | −0.0059 (7) | 0.0028 (8) |
| O2 | 0.0549 (11) | 0.0277 (9) | 0.0526 (10) | 0.0046 (8) | 0.0014 (8) | 0.0060 (8) |
| O3 | 0.0518 (11) | 0.0434 (11) | 0.0366 (8) | 0.0007 (9) | −0.0127 (7) | −0.0042 (8) |
| O4 | 0.0700 (13) | 0.0285 (9) | 0.0416 (9) | −0.0075 (9) | 0.0098 (8) | −0.0041 (8) |
| O5 | 0.0488 (11) | 0.0329 (9) | 0.0394 (9) | −0.0012 (8) | 0.0074 (8) | −0.0061 (8) |
| O6 | 0.0371 (9) | 0.0501 (11) | 0.0307 (8) | 0.0036 (8) | −0.0039 (7) | 0.0020 (8) |
| N1 | 0.0370 (11) | 0.0493 (14) | 0.0435 (11) | −0.0017 (10) | −0.0059 (9) | 0.0079 (10) |
| C1 | 0.0350 (12) | 0.0281 (12) | 0.0359 (11) | −0.0010 (10) | −0.0048 (9) | −0.0006 (10) |
| C2 | 0.0373 (13) | 0.0342 (13) | 0.0373 (12) | 0.0019 (11) | −0.0098 (10) | −0.0010 (11) |
| C3 | 0.0453 (13) | 0.0328 (12) | 0.0347 (12) | 0.0072 (12) | −0.0069 (10) | 0.0012 (11) |
| C4 | 0.0365 (12) | 0.0307 (12) | 0.0335 (11) | 0.0018 (11) | −0.0007 (9) | −0.0006 (10) |
| C5 | 0.0348 (12) | 0.0368 (13) | 0.0292 (11) | −0.0011 (11) | −0.0017 (9) | 0.0012 (10) |
| C6 | 0.0464 (14) | 0.0284 (13) | 0.0504 (14) | −0.0019 (12) | −0.0091 (11) | −0.0016 (11) |
| C7 | 0.0364 (12) | 0.0338 (12) | 0.0334 (11) | −0.0003 (11) | −0.0033 (9) | 0.0054 (10) |
| C8 | 0.0374 (13) | 0.0401 (14) | 0.0345 (12) | 0.0043 (11) | 0.0015 (10) | 0.0000 (11) |
| C9 | 0.0410 (13) | 0.0430 (14) | 0.0297 (11) | 0.0006 (11) | −0.0009 (9) | 0.0004 (11) |
| C10 | 0.0381 (13) | 0.0366 (13) | 0.0368 (12) | −0.0006 (10) | −0.0021 (10) | 0.0052 (10) |
| C11 | 0.0420 (14) | 0.0412 (14) | 0.0412 (13) | 0.0085 (12) | 0.0036 (10) | 0.0018 (12) |
| C12 | 0.0491 (14) | 0.0418 (14) | 0.0315 (11) | 0.0059 (13) | −0.0031 (10) | −0.0031 (11) |
| C13 | 0.0359 (13) | 0.0411 (15) | 0.0475 (14) | 0.0003 (11) | −0.0003 (11) | 0.0064 (12) |
| C14 | 0.0420 (15) | 0.0617 (19) | 0.0564 (16) | −0.0042 (15) | −0.0165 (12) | 0.0100 (15) |
| O1—C5 | 1.406 (3) | C4—C5 | 1.517 (3) |
| O1—C1 | 1.441 (3) | C4—H4 | 0.9800 |
| O2—C6 | 1.430 (3) | C5—H5 | 0.9800 |
| O2—H2O | 0.8200 | C6—H6A | 0.9700 |
| O3—C2 | 1.425 (3) | C6—H6B | 0.9700 |
| O3—H3O | 0.8200 | C7—C12 | 1.377 (4) |
| O4—C3 | 1.415 (3) | C7—C8 | 1.390 (3) |
| O4—H4O | 0.8200 | C8—C9 | 1.376 (3) |
| O5—C4 | 1.420 (3) | C8—H8 | 0.9300 |
| O5—H5O | 0.8200 | C9—C10 | 1.392 (4) |
| O6—C7 | 1.378 (3) | C9—H9 | 0.9300 |
| O6—C5 | 1.410 (3) | C10—C11 | 1.394 (3) |
| N1—C13 | 1.261 (3) | C10—C13 | 1.471 (4) |
| N1—C14 | 1.463 (3) | C11—C12 | 1.389 (4) |
| C1—C6 | 1.510 (3) | C11—H11 | 0.9300 |
| C1—C2 | 1.531 (3) | C12—H12 | 0.9300 |
| C1—H1 | 0.9800 | C13—H13 | 0.9300 |
| C2—C3 | 1.520 (4) | C14—H14A | 0.9600 |
| C2—H2 | 0.9800 | C14—H14B | 0.9600 |
| C3—C4 | 1.530 (3) | C14—H14C | 0.9600 |
| C3—H3 | 0.9800 | ||
| C5—O1—C1 | 111.46 (17) | O6—C5—H5 | 110.4 |
| C6—O2—H2O | 109.5 | C4—C5—H5 | 110.4 |
| C2—O3—H3O | 109.5 | O2—C6—C1 | 111.5 (2) |
| C3—O4—H4O | 109.5 | O2—C6—H6A | 109.3 |
| C4—O5—H5O | 109.5 | C1—C6—H6A | 109.3 |
| C7—O6—C5 | 117.35 (18) | O2—C6—H6B | 109.3 |
| C13—N1—C14 | 118.3 (2) | C1—C6—H6B | 109.3 |
| O1—C1—C6 | 107.3 (2) | H6A—C6—H6B | 108.0 |
| O1—C1—C2 | 109.09 (19) | C12—C7—O6 | 124.5 (2) |
| C6—C1—C2 | 111.9 (2) | C12—C7—C8 | 121.0 (2) |
| O1—C1—H1 | 109.5 | O6—C7—C8 | 114.5 (2) |
| C6—C1—H1 | 109.5 | C9—C8—C7 | 119.5 (2) |
| C2—C1—H1 | 109.5 | C9—C8—H8 | 120.2 |
| O3—C2—C3 | 111.0 (2) | C7—C8—H8 | 120.2 |
| O3—C2—C1 | 110.6 (2) | C8—C9—C10 | 120.5 (2) |
| C3—C2—C1 | 110.17 (18) | C8—C9—H9 | 119.7 |
| O3—C2—H2 | 108.3 | C10—C9—H9 | 119.7 |
| C3—C2—H2 | 108.3 | C9—C10—C11 | 119.2 (2) |
| C1—C2—H2 | 108.3 | C9—C10—C13 | 121.3 (2) |
| O4—C3—C2 | 105.5 (2) | C11—C10—C13 | 119.5 (2) |
| O4—C3—C4 | 111.1 (2) | C12—C11—C10 | 120.5 (2) |
| C2—C3—C4 | 111.3 (2) | C12—C11—H11 | 119.8 |
| O4—C3—H3 | 109.6 | C10—C11—H11 | 119.8 |
| C2—C3—H3 | 109.6 | C7—C12—C11 | 119.2 (2) |
| C4—C3—H3 | 109.6 | C7—C12—H12 | 120.4 |
| O5—C4—C5 | 110.4 (2) | C11—C12—H12 | 120.4 |
| O5—C4—C3 | 109.7 (2) | N1—C13—C10 | 122.6 (2) |
| C5—C4—C3 | 108.34 (19) | N1—C13—H13 | 118.7 |
| O5—C4—H4 | 109.5 | C10—C13—H13 | 118.7 |
| C5—C4—H4 | 109.5 | N1—C14—H14A | 109.5 |
| C3—C4—H4 | 109.5 | N1—C14—H14B | 109.5 |
| O1—C5—O6 | 107.48 (19) | H14A—C14—H14B | 109.5 |
| O1—C5—C4 | 110.26 (19) | N1—C14—H14C | 109.5 |
| O6—C5—C4 | 107.84 (19) | H14A—C14—H14C | 109.5 |
| O1—C5—H5 | 110.4 | H14B—C14—H14C | 109.5 |
| C5—O1—C1—C6 | 175.0 (2) | O5—C4—C5—O6 | 63.7 (2) |
| C5—O1—C1—C2 | −63.6 (2) | C3—C4—C5—O6 | −176.21 (19) |
| O1—C1—C2—O3 | 178.37 (19) | O1—C1—C6—O2 | −66.7 (3) |
| C6—C1—C2—O3 | −63.1 (3) | C2—C1—C6—O2 | 173.71 (19) |
| O1—C1—C2—C3 | 55.3 (3) | C5—O6—C7—C12 | −21.4 (4) |
| C6—C1—C2—C3 | 173.8 (2) | C5—O6—C7—C8 | 157.8 (2) |
| O3—C2—C3—O4 | −53.9 (2) | C12—C7—C8—C9 | −0.4 (4) |
| C1—C2—C3—O4 | 68.9 (2) | O6—C7—C8—C9 | −179.6 (2) |
| O3—C2—C3—C4 | −174.57 (19) | C7—C8—C9—C10 | 1.2 (4) |
| C1—C2—C3—C4 | −51.7 (3) | C8—C9—C10—C11 | −0.5 (4) |
| O4—C3—C4—O5 | 55.8 (3) | C8—C9—C10—C13 | 178.6 (2) |
| C2—C3—C4—O5 | 173.1 (2) | C9—C10—C11—C12 | −1.0 (4) |
| O4—C3—C4—C5 | −64.8 (3) | C13—C10—C11—C12 | 179.9 (3) |
| C2—C3—C4—C5 | 52.6 (3) | O6—C7—C12—C11 | 178.0 (3) |
| C1—O1—C5—O6 | −176.31 (17) | C8—C7—C12—C11 | −1.1 (4) |
| C1—O1—C5—C4 | 66.4 (2) | C10—C11—C12—C7 | 1.8 (4) |
| C7—O6—C5—O1 | 90.4 (2) | C14—N1—C13—C10 | −175.7 (3) |
| C7—O6—C5—C4 | −150.8 (2) | C9—C10—C13—N1 | 15.4 (4) |
| O5—C4—C5—O1 | −179.22 (19) | C11—C10—C13—N1 | −165.5 (3) |
| C3—C4—C5—O1 | −59.1 (2) |
| H··· | ||||
| O2—H2O···O5i | 0.82 | 2.02 | 2.742 (3) | 147 |
| O3—H3O···O2ii | 0.82 | 2.14 | 2.942 (3) | 165 |
| O4—H4O···O2iii | 0.82 | 2.02 | 2.824 (3) | 167 |
| O5—H5O···N1iv | 0.82 | 1.91 | 2.723 (3) | 170 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O2—H2 | 0.82 | 2.02 | 2.742 (3) | 147 |
| O3—H3 | 0.82 | 2.14 | 2.942 (3) | 165 |
| O4—H4 | 0.82 | 2.02 | 2.824 (3) | 167 |
| O5—H5 | 0.82 | 1.91 | 2.723 (3) | 170 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .